EnhancerDB
  1. Home
  2. Enhancers
  3. vista22078[chr16:19532119-19532450]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22078[chr16:19532119-19532450]
Back to top
Tissue distribution of vista22078
Back to top
Transcription factor that possibly regulate vista22078[chr16:19532119-19532450]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 19532029 19532718 POLR2A UCSC Txn Factor no Conserved 108186445
chr16 19532114 19532470 RCOR1 UCSC Txn Factor no Conserved 108186453
chr16 19532148 19532498 STAT5A UCSC Txn Factor no Conserved 108186459
chr16 19532152 19532837 GATA1 UCSC Txn Factor no Conserved 108186461
chr16 19532170 19532450 TEAD4 UCSC Txn Factor no Conserved 108186469
chr16 19532184 19532418 TAL1 UCSC Txn Factor no Conserved 108186476
chr16 19532192 19532480 NR2F2 UCSC Txn Factor no Conserved 108186479
chr16 19532206 19532461 JUND UCSC Txn Factor no Conserved 108186485
chr16 19532216 19532546 EP300 UCSC Txn Factor no Conserved 108186487
chr16 19532125 19532138 POU2F2 JASPAR yes 49352001
chr16 19532138 19532147 PITX3 JASPAR yes 49352002
chr16 19532138 19532148 GSC2 JASPAR yes 49352003
chr16 19532138 19532148 GSC JASPAR yes 49352004
chr16 19532138 19532149 FOXH1 JASPAR yes 49352005
chr16 19532142 19532148 ZNF354C JASPAR yes 49352006
chr16 19532162 19532174 PKNOX1 JASPAR yes 49352007
chr16 19532162 19532174 TGIF1 JASPAR yes 49352008
chr16 19532162 19532174 TGIF2 JASPAR yes 49352009
chr16 19532162 19532180 IRF2 JASPAR yes 49352010
chr16 19532167 19532175 MEIS2 JASPAR yes 49352011
chr16 19532167 19532175 MEIS3 JASPAR yes 49352012
chr16 19532167 19532179 IRF1 JASPAR yes 49352013
chr16 19532168 19532172 NFE TRANSFAC yes 49352014
chr16 19532172 19532176 YY1 TRANSFAC yes 49352015
chr16 19532192 19532202 NFIA JASPAR yes 49352016
chr16 19532194 19532200 NFIC JASPAR yes 49352017
chr16 19532247 19532251 LFA1 TRANSFAC yes 49352018
chr16 19532296 19532310 PLAG1 JASPAR yes 49352019
chr16 19532305 19532310 TFAP2A TRANSFAC yes 49352020
chr16 19532305 19532311 MZF1 JASPAR yes 49352021
chr16 19532305 19532319 RXRB JASPAR yes 49352022
chr16 19532314 19532328 GATA2 JASPAR yes 49352023
chr16 19532316 19532322 GATA1 TRANSFAC yes 49352024
chr16 19532316 19532324 GATA5 JASPAR yes 49352025
chr16 19532320 19532325 ETS2 TRANSFAC yes 49352026
chr16 19532320 19532328 FEV JASPAR yes 49352027
chr16 19532321 19532335 JUN JASPAR yes 49352028
chr16 19532323 19532334 BATF JASPAR yes 49352029
chr16 19532324 19532335 JUNB JASPAR yes 49352030
chr16 19532326 19532335 JDP2 JASPAR yes 49352031
chr16 19532337 19532348 HOXC13 JASPAR yes 49352032
chr16 19532353 19532365 BHLHE23 JASPAR yes 49352033
chr16 19532354 19532364 BHLHE22 JASPAR yes 49352034
chr16 19532354 19532364 NEUROD2 JASPAR yes 49352035
chr16 19532354 19532364 NEUROG2 JASPAR yes 49352036
chr16 19532379 19532383 YY1 TRANSFAC yes 49352037
chr16 19532388 19532391 MYB TRANSFAC yes 49352038
chr16 19532388 19532399 RUNX1 JASPAR yes 49352039
chr16 19532395 19532403 HOXA5 JASPAR yes 49352040
chr16 19532413 19532417 YY1 TRANSFAC yes 49352041
chr16 19532421 19532435 RORA JASPAR yes 49352042
chr16 19532422 19532432 RORA JASPAR yes 49352043
chr16 19532427 19532431 YY1 TRANSFAC yes 49352044
SNP sites on vista22078[chr16:19532119-19532450]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 19532230 rs72767514 T G
EP300 GATA1 JUND NR2F2 POLR2A RCOR1 STAT5A TAL1 TEAD4
4362939
Genes possibly regulated by vista22078[chr16:19532119-19532450]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 19513015 19533467 - GDE1 ENSG00000006007.7 19533467 0.59 0.99 14601 98983
chr16 19535133 19564730 + CCP110 ENSG00000103540.12 19535133 0.76 0.99 14602 97317
chr16 19566562 19718115 + C16orf62 ENSG00000103544.10 19566562 0.66 1.0 14603 65888
Expression level of Genes
Back to top
miRNAs possibly regulated by vista22078[chr16:19532119-19532450]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results