EnhancerDB
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  3. vista22089[chr16:20079556-20079735]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22089[chr16:20079556-20079735]
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Tissue distribution of vista22089
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Transcription factor that possibly regulate vista22089[chr16:20079556-20079735]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 20079556 20079571 FOXP1 JASPAR yes 49352609
chr16 20079557 20079572 FOXP1 JASPAR yes 49352610
chr16 20079557 20079578 IRF1 JASPAR yes 49352611
chr16 20079558 20079573 FOXP1 JASPAR yes 49352612
chr16 20079558 20079579 IRF1 JASPAR yes 49352613
chr16 20079559 20079574 FOXP1 JASPAR yes 49352614
chr16 20079559 20079580 IRF1 JASPAR yes 49352615
chr16 20079560 20079575 FOXP1 JASPAR yes 49352616
chr16 20079560 20079581 IRF1 JASPAR yes 49352617
chr16 20079561 20079576 FOXP1 JASPAR yes 49352618
chr16 20079561 20079582 IRF1 JASPAR yes 49352619
chr16 20079562 20079577 FOXP1 JASPAR yes 49352620
chr16 20079562 20079583 IRF1 JASPAR yes 49352621
chr16 20079563 20079578 FOXP1 JASPAR yes 49352622
chr16 20079563 20079584 IRF1 JASPAR yes 49352623
chr16 20079564 20079579 FOXP1 JASPAR yes 49352624
chr16 20079564 20079585 IRF1 JASPAR yes 49352625
chr16 20079565 20079580 FOXP1 JASPAR yes 49352626
chr16 20079565 20079586 IRF1 JASPAR yes 49352627
chr16 20079566 20079581 FOXP1 JASPAR yes 49352628
chr16 20079568 20079583 FOXP1 JASPAR yes 49352629
chr16 20079569 20079590 IRF1 JASPAR yes 49352630
chr16 20079570 20079585 FOXP1 JASPAR yes 49352631
chr16 20079573 20079587 SPIC JASPAR yes 49352632
chr16 20079573 20079588 PRDM1 JASPAR yes 49352633
chr16 20079575 20079596 IRF1 JASPAR yes 49352634
chr16 20079624 20079642 MAFF JASPAR yes 49352635
chr16 20079632 20079636 NFE TRANSFAC yes 49352636
chr16 20079638 20079647 HIC2 JASPAR yes 49352637
chr16 20079641 20079645 LFA1 TRANSFAC yes 49352638
chr16 20079668 20079687 RFX2 JASPAR yes 49352639
chr16 20079672 20079688 RFX2 JASPAR yes 49352640
chr16 20079672 20079688 RFX3 JASPAR yes 49352641
chr16 20079672 20079688 RFX5 JASPAR yes 49352642
chr16 20079674 20079684 HOXA13 JASPAR yes 49352643
chr16 20079696 20079700 YY1 TRANSFAC yes 49352644
chr16 20079703 20079719 SOX4 JASPAR yes 49352645
chr16 20079703 20079719 SOX8 JASPAR yes 49352646
chr16 20079714 20079726 IRF1 JASPAR yes 49352647
SNP sites on vista22089[chr16:20079556-20079735]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 20079557 rs563694793 G A
FOXP1 IRF1
4365144
chr16 20079578 rs12934818 A G
FOXP1 IRF1 PRDM1 SPIC
4365145
Genes possibly regulated by vista22089[chr16:20079556-20079735]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 20042807 20085239 - GPR139 ENSG00000180269.7 20085239 1.0 1.0 14607 94496
Expression level of Genes
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miRNAs possibly regulated by vista22089[chr16:20079556-20079735]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results