EnhancerDB
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  3. vista22135[chr16:22229382-22229580]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22135[chr16:22229382-22229580]
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Tissue distribution of vista22135
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Transcription factor that possibly regulate vista22135[chr16:22229382-22229580]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 22229007 22229897 POLR2A UCSC Txn Factor no Conserved 108188461
chr16 22229305 22229609 USF1 UCSC Txn Factor no Conserved 108188471
chr16 22229320 22229623 USF2 UCSC Txn Factor no Conserved 108188474
chr16 22229323 22229585 NFYB UCSC Txn Factor no Conserved 108188475
chr16 22229370 22229389 PAX5 JASPAR yes 9953131
chr16 22229370 22229389 PAX5 JASPAR yes 49354583
chr16 22229375 22229389 PAX6 JASPAR yes 9953132
chr16 22229375 22229389 PAX6 JASPAR yes 49354584
chr16 22229429 22229440 USF1 JASPAR yes 9953133
chr16 22229429 22229440 USF2 JASPAR yes 9953134
chr16 22229429 22229440 USF1 JASPAR yes 49354585
chr16 22229429 22229440 USF2 JASPAR yes 49354586
chr16 22229430 22229440 SREBF2 JASPAR yes 9953135
chr16 22229430 22229440 TFE3 JASPAR yes 9953136
chr16 22229430 22229440 TFEB JASPAR yes 9953137
chr16 22229430 22229440 TFEC JASPAR yes 9953138
chr16 22229430 22229440 SREBF2 JASPAR yes 49354587
chr16 22229430 22229440 TFE3 JASPAR yes 49354588
chr16 22229430 22229440 TFEB JASPAR yes 49354589
chr16 22229430 22229440 TFEC JASPAR yes 49354590
chr16 22229430 22229441 USF1 JASPAR yes 9953139
chr16 22229430 22229441 USF1 JASPAR yes 49354591
chr16 22229446 22229457 DUX4 JASPAR yes 9953140
chr16 22229446 22229457 DUX4 JASPAR yes 49354592
chr16 22229450 22229454 H1TF2 TRANSFAC yes 9953141
chr16 22229450 22229454 NFE TRANSFAC yes 9953142
chr16 22229450 22229454 SRF TRANSFAC yes 9953143
chr16 22229450 22229454 H1TF2 TRANSFAC yes 49354593
chr16 22229450 22229454 NFE TRANSFAC yes 49354594
chr16 22229450 22229454 SRF TRANSFAC yes 49354595
chr16 22229456 22229471 RFX5 JASPAR yes 9953144
chr16 22229456 22229471 RFX5 JASPAR yes 49354596
chr16 22229513 22229523 TFE3 JASPAR yes 9953145
chr16 22229513 22229523 TFEB JASPAR yes 9953146
chr16 22229513 22229523 TFEC JASPAR yes 9953147
chr16 22229513 22229523 TFE3 JASPAR yes 49354597
chr16 22229513 22229523 TFEB JASPAR yes 49354598
chr16 22229513 22229523 TFEC JASPAR yes 49354599
chr16 22229528 22229533 SP1 TRANSFAC yes 9953148
chr16 22229528 22229533 SP1 TRANSFAC yes 49354600
chr16 22229532 22229536 LFA1 TRANSFAC yes 9953149
chr16 22229532 22229536 LFA1 TRANSFAC yes 49354601
chr16 22229540 22229559 REST JASPAR yes 9953150
chr16 22229540 22229559 REST JASPAR yes 49354602
chr16 22229557 22229571 PAX6 JASPAR yes 9953151
chr16 22229557 22229571 PAX6 JASPAR yes 49354603
SNP sites on vista22135[chr16:22229382-22229580]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 22229396 rs80185793 G C,T
NFYB POLR2A USF1 USF2
4370806
Genes possibly regulated by vista22135[chr16:22229382-22229580]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 22177618 22203075 + SDR42E2 ENSG00000183921.5 22177618 0.93 1.0 14636 48236
chr16 22217603 22298554 + EEF2K ENSG00000103319.7 22217603 0.63 1.0 14637 88221
chr16 22308730 22346424 + POLR3E ENSG00000058600.11 22308730 0.63 1.0 14638 20850
Expression level of Genes
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miRNAs possibly regulated by vista22135[chr16:22229382-22229580]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results