EnhancerDB
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  3. vista22212[chr16:25049848-25050165]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22212[chr16:25049848-25050165]
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Tissue distribution of vista22212
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Transcription factor that possibly regulate vista22212[chr16:25049848-25050165]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 25049890 25050233 SPI1 UCSC Txn Factor no Conserved 108189643
chr16 25049892 25050127 TCF12 UCSC Txn Factor no Conserved 108189645
chr16 25049838 25049852 PAX6 JASPAR yes 10098165
chr16 25049838 25049852 PAX6 JASPAR yes 49358523
chr16 25049838 25049854 ZNF143 JASPAR yes 10098166
chr16 25049838 25049854 ZNF143 JASPAR yes 49358524
chr16 25049849 25049860 ESRRA JASPAR yes 10098167
chr16 25049849 25049860 ESRRB JASPAR yes 10098168
chr16 25049849 25049860 ESRRA JASPAR yes 49358525
chr16 25049849 25049860 ESRRB JASPAR yes 49358526
chr16 25049849 25049862 NR2F1 JASPAR yes 10098169
chr16 25049849 25049862 NR2F1 JASPAR yes 49358527
chr16 25049851 25049859 NR4A2 JASPAR yes 10098170
chr16 25049851 25049859 NR4A2 JASPAR yes 49358528
chr16 25049852 25049869 RARA JASPAR yes 10098171
chr16 25049852 25049869 RXRA JASPAR yes 10098172
chr16 25049852 25049869 RARA JASPAR yes 49358529
chr16 25049852 25049869 RXRA JASPAR yes 49358530
chr16 25049853 25049857 ESR1 TRANSFAC yes 10098173
chr16 25049853 25049857 ESR1 TRANSFAC yes 49358531
chr16 25049874 25049879 GATA2 JASPAR yes 10098174
chr16 25049874 25049879 GATA2 JASPAR yes 49358532
chr16 25049887 25049896 NKX2-8 JASPAR yes 10098175
chr16 25049887 25049896 NKX2-8 JASPAR yes 49358533
chr16 25049887 25049897 NKX2-3 JASPAR yes 10098176
chr16 25049887 25049897 NKX2-3 JASPAR yes 49358534
chr16 25049888 25049896 ISL2 JASPAR yes 10098177
chr16 25049888 25049896 ISL2 JASPAR yes 49358535
chr16 25049888 25049897 NKX3-2 JASPAR yes 10098178
chr16 25049888 25049897 NKX3-2 JASPAR yes 49358536
chr16 25049893 25049898 TFAP2A TRANSFAC yes 10098179
chr16 25049893 25049898 TFAP2A TRANSFAC yes 49358537
chr16 25049893 25049899 MZF1 JASPAR yes 10098180
chr16 25049893 25049899 MZF1 JASPAR yes 49358538
chr16 25049930 25049936 MZF1 JASPAR yes 10098181
chr16 25049930 25049936 MZF1 JASPAR yes 49358539
chr16 25049934 25049946 NHLH1 JASPAR yes 10098182
chr16 25049934 25049946 NHLH1 JASPAR yes 49358540
chr16 25049935 25049945 MSC JASPAR yes 10098183
chr16 25049935 25049945 NHLH1 JASPAR yes 10098184
chr16 25049935 25049945 TFAP4 JASPAR yes 10098185
chr16 25049935 25049945 MSC JASPAR yes 49358541
chr16 25049935 25049945 NHLH1 JASPAR yes 49358542
chr16 25049935 25049945 TFAP4 JASPAR yes 49358543
chr16 25049961 25049967 SOX10 JASPAR yes 10098186
chr16 25049961 25049967 SOX10 JASPAR yes 49358544
chr16 25049961 25049975 SPI1 JASPAR yes 10098187
chr16 25049961 25049975 SPIC JASPAR yes 10098188
chr16 25049961 25049975 SPI1 JASPAR yes 49358545
chr16 25049961 25049975 SPIC JASPAR yes 49358546
chr16 25049967 25049972 ETS2 TRANSFAC yes 10098189
chr16 25049967 25049972 ETS2 TRANSFAC yes 49358547
chr16 25049967 25049978 NFKB1 JASPAR yes 10098190
chr16 25049967 25049978 NFKB1 JASPAR yes 49358548
chr16 25049974 25049995 ZNF263 JASPAR yes 10098191
chr16 25049974 25049995 ZNF263 JASPAR yes 49358549
chr16 25049989 25050004 RUNX2 JASPAR yes 10098192
chr16 25049989 25050004 RUNX2 JASPAR yes 49358550
chr16 25050003 25050013 ID4 JASPAR yes 10098193
chr16 25050003 25050013 TCF3 JASPAR yes 10098194
chr16 25050003 25050013 TCF4 JASPAR yes 10098195
chr16 25050003 25050013 ID4 JASPAR yes 49358551
chr16 25050003 25050013 TCF3 JASPAR yes 49358552
chr16 25050003 25050013 TCF4 JASPAR yes 49358553
chr16 25050004 25050013 SNAI2 JASPAR yes 10098196
chr16 25050004 25050013 SNAI2 JASPAR yes 49358554
chr16 25050005 25050010 USF2 TRANSFAC yes 10098197
chr16 25050005 25050010 USF2 TRANSFAC yes 49358555
chr16 25050011 25050015 NFE TRANSFAC yes 10098198
chr16 25050011 25050015 NFE TRANSFAC yes 49358556
chr16 25050015 25050021 TCF4 TRANSFAC yes 10098199
chr16 25050015 25050021 TCF4 TRANSFAC yes 49358557
chr16 25050046 25050061 SCRT1 JASPAR yes 10098200
chr16 25050046 25050061 SCRT1 JASPAR yes 49358558
chr16 25050047 25050057 FIGLA JASPAR yes 10098201
chr16 25050047 25050057 FIGLA JASPAR yes 49358559
chr16 25050048 25050057 SNAI2 JASPAR yes 10098202
chr16 25050048 25050057 SNAI2 JASPAR yes 49358560
chr16 25050048 25050061 SCRT2 JASPAR yes 10098203
chr16 25050048 25050061 SCRT2 JASPAR yes 49358561
chr16 25050049 25050054 USF2 TRANSFAC yes 10098204
chr16 25050049 25050054 USF2 TRANSFAC yes 49358562
chr16 25050049 25050068 RFX2 JASPAR yes 10098205
chr16 25050049 25050068 RFX2 JASPAR yes 49358563
chr16 25050051 25050066 RFX5 JASPAR yes 10098206
chr16 25050051 25050066 RFX5 JASPAR yes 49358564
chr16 25050084 25050092 GATA3 JASPAR yes 10098207
chr16 25050084 25050092 GATA5 JASPAR yes 10098208
chr16 25050084 25050092 GATA3 JASPAR yes 49358565
chr16 25050084 25050092 GATA5 JASPAR yes 49358566
chr16 25050093 25050105 HNF1B JASPAR yes 10098209
chr16 25050093 25050105 HNF1B JASPAR yes 49358567
chr16 25050103 25050124 IRF1 JASPAR yes 10098210
chr16 25050103 25050124 IRF1 JASPAR yes 49358568
chr16 25050105 25050120 STAT2 JASPAR yes 10098211
chr16 25050105 25050120 STAT2 JASPAR yes 49358569
chr16 25050107 25050119 IRF1 JASPAR yes 10098212
chr16 25050107 25050119 IRF1 JASPAR yes 49358570
chr16 25050119 25050123 NFE TRANSFAC yes 10098213
chr16 25050119 25050123 NFE TRANSFAC yes 49358571
chr16 25050146 25050152 LEF1 TRANSFAC yes 10098214
chr16 25050146 25050152 SOX10 JASPAR yes 10098215
chr16 25050146 25050152 LEF1 TRANSFAC yes 49358572
chr16 25050146 25050152 SOX10 JASPAR yes 49358573
chr16 25050147 25050158 DMRT3 JASPAR yes 10098216
chr16 25050147 25050158 DMRT3 JASPAR yes 49358574
chr16 25050155 25050169 RORA JASPAR yes 10098217
chr16 25050155 25050169 RORA JASPAR yes 49358575
chr16 25050160 25050175 AR JASPAR yes 10098218
chr16 25050160 25050175 AR JASPAR yes 49358576
SNP sites on vista22212[chr16:25049848-25050165]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 25049862 rs4787672 G C,T
NR2F1 RARA RXRA
4385367
chr16 25049863 rs113996803 G A
RARA RXRA
4385368
chr16 25049962 rs116465724 A G
SOX10 SPI1 SPIC TCF12
4385369
chr16 25049966 rs575654331 A G
SOX10 SPI1 SPIC TCF12
4385370
chr16 25050164 rs570183550 C T
AR RORA SPI1
4385371
Genes possibly regulated by vista22212[chr16:25049848-25050165]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 24930706 25026987 - ARHGAP17 ENSG00000140750.12 25026987 0.71 0.99 14660 77139
chr16 25123050 25189552 + LCMT1 ENSG00000205629.7 25123050 0.67 1.0 14661 27115
Expression level of Genes
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miRNAs possibly regulated by vista22212[chr16:25049848-25050165]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results