EnhancerDB
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  3. vista22250[chr16:27192533-27192714]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22250[chr16:27192533-27192714]
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Tissue distribution of vista22250
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Transcription factor that possibly regulate vista22250[chr16:27192533-27192714]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 27192307 27192775 CTCF UCSC Txn Factor no Conserved 108189922
chr16 27192526 27192535 ZEB1 JASPAR yes 10175696
chr16 27192526 27192535 ZEB1 JASPAR yes 49359998
chr16 27192526 27192539 ZBTB18 JASPAR yes 10175697
chr16 27192526 27192539 ZBTB18 JASPAR yes 49359999
chr16 27192527 27192537 FIGLA JASPAR yes 10175698
chr16 27192527 27192537 ID4 JASPAR yes 10175699
chr16 27192527 27192537 TCF3 JASPAR yes 10175700
chr16 27192527 27192537 TCF4 JASPAR yes 10175701
chr16 27192527 27192537 FIGLA JASPAR yes 49360000
chr16 27192527 27192537 ID4 JASPAR yes 49360001
chr16 27192527 27192537 TCF3 JASPAR yes 49360002
chr16 27192527 27192537 TCF4 JASPAR yes 49360003
chr16 27192529 27192534 USF2 TRANSFAC yes 10175702
chr16 27192529 27192534 USF2 TRANSFAC yes 49360004
chr16 27192547 27192568 ZNF263 JASPAR yes 10175703
chr16 27192547 27192568 ZNF263 JASPAR yes 49360005
chr16 27192554 27192559 GATA2 JASPAR yes 10175704
chr16 27192554 27192559 GATA2 JASPAR yes 49360006
chr16 27192562 27192583 ZNF263 JASPAR yes 10175705
chr16 27192562 27192583 ZNF263 JASPAR yes 49360007
chr16 27192565 27192571 PEA3 TRANSFAC yes 10175706
chr16 27192565 27192571 PEA3 TRANSFAC yes 49360008
chr16 27192569 27192584 HNF4G JASPAR yes 10175707
chr16 27192569 27192584 HNF4G JASPAR yes 49360009
chr16 27192572 27192575 MYB TRANSFAC yes 10175708
chr16 27192572 27192575 MYB TRANSFAC yes 49360010
chr16 27192597 27192618 REST JASPAR yes 10175709
chr16 27192597 27192618 REST JASPAR yes 49360011
chr16 27192621 27192626 H4TF1 TRANSFAC yes 10175710
chr16 27192621 27192626 H4TF1 TRANSFAC yes 49360012
chr16 27192640 27192645 TFAP2A TRANSFAC yes 10175711
chr16 27192640 27192645 TFAP2A TRANSFAC yes 49360013
chr16 27192640 27192646 MZF1 JASPAR yes 10175712
chr16 27192640 27192646 MZF1 JASPAR yes 49360014
chr16 27192653 27192673 PPARG JASPAR yes 10175713
chr16 27192653 27192673 PPARG JASPAR yes 49360015
chr16 27192656 27192660 H4TF2 TRANSFAC yes 10175714
chr16 27192656 27192660 H4TF2 TRANSFAC yes 49360016
chr16 27192659 27192677 ESR1 JASPAR yes 10175715
chr16 27192659 27192677 ESR1 JASPAR yes 49360017
chr16 27192671 27192675 H4TF2 TRANSFAC yes 10175716
chr16 27192671 27192675 H4TF2 TRANSFAC yes 49360018
chr16 27192713 27192723 SP1 JASPAR yes 10175717
chr16 27192713 27192723 SP1 JASPAR yes 49360019
SNP sites on vista22250[chr16:27192533-27192714]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 27192614 rs150779801 G GA
CTCF REST
4393967
chr16 27192691 rs4427807 C T
CTCF
4393968
Genes possibly regulated by vista22250[chr16:27192533-27192714]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 27214807 27233089 + KDM8 ENSG00000155666.7 27214807 0.96 0.99 14665 77907
chr16 27236312 27280115 - NSMCE1 ENSG00000169189.12 27280115 0.66 1.0 14666 12599
chr16 27279526 27301813 + CTD-3203P2.2 ENSG00000245888.2 27279526 0.76 1.0 14667 13188
Expression level of Genes
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miRNAs possibly regulated by vista22250[chr16:27192533-27192714]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results