EnhancerDB
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  3. vista22273[chr16:27338285-27338559]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22273[chr16:27338285-27338559]
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Tissue distribution of vista22273
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Transcription factor that possibly regulate vista22273[chr16:27338285-27338559]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 27338173 27338593 STAT1 UCSC Txn Factor no Conserved 108190524
chr16 27338189 27338574 STAT3 UCSC Txn Factor no Conserved 108190527
chr16 27338267 27338547 CEBPB UCSC Txn Factor no Conserved 108190538
chr16 27338284 27338291 ETS1 TRANSFAC yes 10187120
chr16 27338284 27338291 ETS1 TRANSFAC yes 49361033
chr16 27338302 27338316 TLX1 JASPAR yes 10187121
chr16 27338302 27338316 TLX1 JASPAR yes 49361034
chr16 27338303 27338314 FLI1 JASPAR yes 10187122
chr16 27338303 27338314 FLI1 JASPAR yes 49361035
chr16 27338322 27338332 TFAP4 JASPAR yes 10187123
chr16 27338322 27338332 TFAP4 JASPAR yes 49361036
chr16 27338327 27338331 NFE TRANSFAC yes 10187124
chr16 27338327 27338331 NFE TRANSFAC yes 49361037
chr16 27338341 27338348 SPIB JASPAR yes 10187125
chr16 27338341 27338348 SPIB JASPAR yes 49361038
chr16 27338364 27338374 MEF2A JASPAR yes 10187126
chr16 27338364 27338374 MEF2A JASPAR yes 49361039
chr16 27338365 27338369 TEAD2 TRANSFAC yes 10187127
chr16 27338365 27338369 TEAD2 TRANSFAC yes 49361040
chr16 27338374 27338385 FOS JASPAR yes 10187128
chr16 27338374 27338385 FOS JASPAR yes 49361041
chr16 27338380 27338383 MYB TRANSFAC yes 10187129
chr16 27338380 27338383 MYB TRANSFAC yes 49361042
chr16 27338385 27338396 CEBPB JASPAR yes 10187130
chr16 27338385 27338396 CEBPB JASPAR yes 49361043
chr16 27338386 27338396 CEBPB JASPAR yes 10187131
chr16 27338386 27338396 CEBPD JASPAR yes 10187132
chr16 27338386 27338396 CEBPE JASPAR yes 10187133
chr16 27338386 27338396 CEBPG JASPAR yes 10187134
chr16 27338386 27338396 CEBPB JASPAR yes 49361044
chr16 27338386 27338396 CEBPD JASPAR yes 49361045
chr16 27338386 27338396 CEBPE JASPAR yes 49361046
chr16 27338386 27338396 CEBPG JASPAR yes 49361047
chr16 27338386 27338397 CEBPA JASPAR yes 10187135
chr16 27338386 27338397 CEBPA JASPAR yes 49361048
chr16 27338421 27338425 NFE TRANSFAC yes 10187136
chr16 27338421 27338425 NFE TRANSFAC yes 49361049
chr16 27338429 27338444 NR2C2 JASPAR yes 10187137
chr16 27338429 27338444 NR2C2 JASPAR yes 49361050
chr16 27338430 27338444 NR2F1 JASPAR yes 10187138
chr16 27338430 27338444 RXRB JASPAR yes 10187139
chr16 27338430 27338444 RXRG JASPAR yes 10187140
chr16 27338430 27338444 NR2F1 JASPAR yes 49361051
chr16 27338430 27338444 RXRB JASPAR yes 49361052
chr16 27338430 27338444 RXRG JASPAR yes 49361053
chr16 27338432 27338444 INSM1 JASPAR yes 10187141
chr16 27338432 27338444 INSM1 JASPAR yes 49361054
chr16 27338435 27338448 NR2F1 JASPAR yes 10187142
chr16 27338435 27338448 NR2F1 JASPAR yes 49361055
chr16 27338439 27338443 ESR1 TRANSFAC yes 10187143
chr16 27338439 27338443 ESR1 TRANSFAC yes 49361056
chr16 27338457 27338465 SP1 TRANSFAC yes 10187144
chr16 27338457 27338465 SP1 TRANSFAC yes 49361057
chr16 27338457 27338467 SP1 JASPAR yes 10187145
chr16 27338457 27338467 SP1 JASPAR yes 49361058
chr16 27338466 27338480 PLAG1 JASPAR yes 10187146
chr16 27338466 27338480 PLAG1 JASPAR yes 49361059
chr16 27338478 27338497 REST JASPAR yes 10187147
chr16 27338478 27338497 REST JASPAR yes 49361060
chr16 27338481 27338485 NFE TRANSFAC yes 10187148
chr16 27338481 27338485 NFE TRANSFAC yes 49361061
chr16 27338492 27338499 SPIB JASPAR yes 10187149
chr16 27338492 27338499 SPIB JASPAR yes 49361062
chr16 27338504 27338516 PKNOX1 JASPAR yes 10187150
chr16 27338504 27338516 PKNOX2 JASPAR yes 10187151
chr16 27338504 27338516 TGIF1 JASPAR yes 10187152
chr16 27338504 27338516 TGIF2 JASPAR yes 10187153
chr16 27338504 27338516 PKNOX1 JASPAR yes 49361063
chr16 27338504 27338516 PKNOX2 JASPAR yes 49361064
chr16 27338504 27338516 TGIF1 JASPAR yes 49361065
chr16 27338504 27338516 TGIF2 JASPAR yes 49361066
chr16 27338505 27338515 ID4 JASPAR yes 10187154
chr16 27338505 27338515 ID4 JASPAR yes 49361067
chr16 27338506 27338515 SNAI2 JASPAR yes 10187155
chr16 27338506 27338515 SNAI2 JASPAR yes 49361068
chr16 27338507 27338512 USF2 TRANSFAC yes 10187156
chr16 27338507 27338512 USF2 TRANSFAC yes 49361069
chr16 27338509 27338517 MEIS3 JASPAR yes 10187157
chr16 27338509 27338517 MEIS3 JASPAR yes 49361070
chr16 27338510 27338514 NFE TRANSFAC yes 10187158
chr16 27338510 27338514 NFE TRANSFAC yes 49361071
chr16 27338532 27338536 NFE TRANSFAC yes 10187159
chr16 27338532 27338536 NFE TRANSFAC yes 49361072
chr16 27338548 27338554 SP1 TRANSFAC yes 10187160
chr16 27338548 27338554 SP1 TRANSFAC yes 49361073
chr16 27338548 27338558 SP1 JASPAR yes 10187161
chr16 27338548 27338558 SP1 JASPAR yes 49361074
SNP sites on vista22273[chr16:27338285-27338559]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 27338427 rs180850721 G A,T
CEBPB STAT1 STAT3
4395189
chr16 27338441 rs138159467 G A,T
CEBPB ESR1 INSM1 NR2C2 NR2F1 RXRB RXRG STAT1 STAT3
4395190
chr16 27338446 rs149080711 C T
CEBPB NR2F1 STAT1 STAT3
4395191
chr16 27338476 rs570538089 C T
CEBPB PLAG1 STAT1 STAT3
4395192
chr16 27338547 rs539646324 A G
CEBPB STAT1 STAT3
4395193
Genes possibly regulated by vista22273[chr16:27338285-27338559]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 27236312 27280115 - NSMCE1 ENSG00000169189.12 27280115 0.66 1.0 14666 41830
chr16 27279526 27301813 + CTD-3203P2.2 ENSG00000245888.2 27279526 0.76 1.0 14667 41241
chr16 27324989 27376099 + IL4R ENSG00000077238.9 27324989 0.79 1.0 14668 86704
chr16 27413483 27462115 + IL21R ENSG00000103522.11 27413483 0.98 1.0 14669 25076
Expression level of Genes
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miRNAs possibly regulated by vista22273[chr16:27338285-27338559]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results