EnhancerDB
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  3. vista22280[chr16:27419263-27419728]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22280[chr16:27419263-27419728]
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Tissue distribution of vista22280
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Transcription factor that possibly regulate vista22280[chr16:27419263-27419728]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 27419152 27420479 POLR2A UCSC Txn Factor no Conserved 108190774
chr16 27419323 27420232 RELA UCSC Txn Factor no Conserved 108190780
chr16 27419381 27419661 JUND UCSC Txn Factor no Conserved 108190786
chr16 27419385 27419626 FOSL2 UCSC Txn Factor no Conserved 108190788
chr16 27419281 27419284 MYB TRANSFAC yes 10193056
chr16 27419281 27419284 MYB TRANSFAC yes 49361441
chr16 27419290 27419295 GATA2 JASPAR yes 10193057
chr16 27419290 27419295 GATA2 JASPAR yes 49361442
chr16 27419296 27419307 FOXA1 JASPAR yes 10193058
chr16 27419296 27419307 FOXA1 JASPAR yes 49361443
chr16 27419307 27419326 RFX2 JASPAR yes 10193059
chr16 27419307 27419326 RFX2 JASPAR yes 49361444
chr16 27419311 27419327 RFX2 JASPAR yes 10193060
chr16 27419311 27419327 RFX3 JASPAR yes 10193061
chr16 27419311 27419327 RFX5 JASPAR yes 10193062
chr16 27419311 27419327 RFX2 JASPAR yes 49361445
chr16 27419311 27419327 RFX3 JASPAR yes 49361446
chr16 27419311 27419327 RFX5 JASPAR yes 49361447
chr16 27419321 27419342 IRF1 JASPAR yes 10193063
chr16 27419321 27419342 IRF1 JASPAR yes 49361448
chr16 27419325 27419340 IRF9 JASPAR yes 10193064
chr16 27419325 27419340 IRF9 JASPAR yes 49361449
chr16 27419336 27419340 YY1 TRANSFAC yes 10193065
chr16 27419336 27419340 YY1 TRANSFAC yes 49361450
chr16 27419348 27419359 DMRT3 JASPAR yes 10193066
chr16 27419348 27419359 DMRT3 JASPAR yes 49361451
chr16 27419387 27419402 RFX5 JASPAR yes 10193067
chr16 27419387 27419402 RFX5 JASPAR yes 49361452
chr16 27419395 27419400 TFAP2A TRANSFAC yes 10193068
chr16 27419395 27419400 TFAP2A TRANSFAC yes 49361453
chr16 27419395 27419401 MZF1 JASPAR yes 10193069
chr16 27419395 27419401 MZF1 JASPAR yes 49361454
chr16 27419409 27419412 MYB TRANSFAC yes 10193070
chr16 27419409 27419412 MYB TRANSFAC yes 49361455
chr16 27419411 27419417 SOX10 JASPAR yes 10193071
chr16 27419411 27419417 SOX10 JASPAR yes 49361456
chr16 27419415 27419432 NR3C1 JASPAR yes 10193072
chr16 27419415 27419432 NR3C2 JASPAR yes 10193073
chr16 27419415 27419432 NR3C1 JASPAR yes 49361457
chr16 27419415 27419432 NR3C2 JASPAR yes 49361458
chr16 27419417 27419423 HiNF-A TRANSFAC yes 10193074
chr16 27419417 27419423 HiNF-A TRANSFAC yes 49361459
chr16 27419417 27419432 AR JASPAR yes 10193075
chr16 27419417 27419432 AR JASPAR yes 49361460
chr16 27419424 27419428 NFE TRANSFAC yes 10193076
chr16 27419424 27419428 NFE TRANSFAC yes 49361461
chr16 27419453 27419468 FOXP1 JASPAR yes 10193077
chr16 27419453 27419468 FOXP1 JASPAR yes 49361462
chr16 27419456 27419467 FOXP2 JASPAR yes 10193078
chr16 27419456 27419467 FOXP2 JASPAR yes 49361463
chr16 27419457 27419465 FOXO3 JASPAR yes 10193079
chr16 27419457 27419465 FOXO3 JASPAR yes 49361464
chr16 27419478 27419494 GLIS1 JASPAR yes 10193080
chr16 27419478 27419494 GLIS1 JASPAR yes 49361465
chr16 27419479 27419493 GLIS3 JASPAR yes 10193081
chr16 27419479 27419493 GLIS3 JASPAR yes 49361466
chr16 27419499 27419506 SPIB JASPAR yes 10193082
chr16 27419499 27419506 SPIB JASPAR yes 49361467
chr16 27419499 27419510 FLI1 JASPAR yes 10193083
chr16 27419499 27419510 FLI1 JASPAR yes 49361468
chr16 27419500 27419508 EHF JASPAR yes 10193084
chr16 27419500 27419508 EHF JASPAR yes 49361469
chr16 27419504 27419518 JUN JASPAR yes 10193085
chr16 27419504 27419518 JUN JASPAR yes 49361470
chr16 27419507 27419518 FOSL2 JASPAR yes 10193086
chr16 27419507 27419518 JUNB JASPAR yes 10193087
chr16 27419507 27419518 FOSL2 JASPAR yes 49361471
chr16 27419507 27419518 JUNB JASPAR yes 49361472
chr16 27419508 27419519 FOS JASPAR yes 10193088
chr16 27419508 27419519 FOSL1 JASPAR yes 10193089
chr16 27419508 27419519 JUND JASPAR yes 10193090
chr16 27419508 27419519 NFE2 JASPAR yes 10193091
chr16 27419508 27419519 FOS JASPAR yes 49361473
chr16 27419508 27419519 FOSL1 JASPAR yes 49361474
chr16 27419508 27419519 JUND JASPAR yes 49361475
chr16 27419508 27419519 NFE2 JASPAR yes 49361476
chr16 27419509 27419516 JUN TRANSFAC yes 10193092
chr16 27419509 27419516 JUN TRANSFAC yes 49361477
chr16 27419509 27419518 JDP2 JASPAR yes 10193093
chr16 27419509 27419518 JDP2 JASPAR yes 49361478
chr16 27419509 27419520 FOSL2 JASPAR yes 10193094
chr16 27419509 27419520 JUNB JASPAR yes 10193095
chr16 27419509 27419520 FOSL2 JASPAR yes 49361479
chr16 27419509 27419520 JUNB JASPAR yes 49361480
chr16 27419509 27419523 JUN JASPAR yes 10193096
chr16 27419509 27419523 JUN JASPAR yes 49361481
chr16 27419510 27419521 BATF JASPAR yes 10193097
chr16 27419510 27419521 BATF JASPAR yes 49361482
chr16 27419526 27419539 NR2F1 JASPAR yes 10193098
chr16 27419526 27419539 NR2F1 JASPAR yes 49361483
chr16 27419527 27419542 LEF1 JASPAR yes 10193099
chr16 27419527 27419542 NR2C2 JASPAR yes 10193100
chr16 27419527 27419542 LEF1 JASPAR yes 49361484
chr16 27419527 27419542 NR2C2 JASPAR yes 49361485
chr16 27419528 27419542 RXRB JASPAR yes 10193101
chr16 27419528 27419542 RXRG JASPAR yes 10193102
chr16 27419528 27419542 RXRB JASPAR yes 49361486
chr16 27419528 27419542 RXRG JASPAR yes 49361487
chr16 27419530 27419534 ESR1 TRANSFAC yes 10193103
chr16 27419530 27419534 ESR1 TRANSFAC yes 49361488
chr16 27419530 27419545 HNF1A JASPAR yes 10193104
chr16 27419530 27419545 HNF1A JASPAR yes 49361489
chr16 27419531 27419544 HNF1B JASPAR yes 10193105
chr16 27419531 27419544 HNF1B JASPAR yes 49361490
chr16 27419539 27419546 MEIS1 JASPAR yes 10193106
chr16 27419539 27419546 MEIS1 JASPAR yes 49361491
chr16 27419539 27419547 MEIS2 JASPAR yes 10193107
chr16 27419539 27419547 MEIS2 JASPAR yes 49361492
chr16 27419555 27419559 YY1 TRANSFAC yes 10193108
chr16 27419555 27419559 YY1 TRANSFAC yes 49361493
chr16 27419590 27419593 MYB TRANSFAC yes 10193109
chr16 27419590 27419593 MYB TRANSFAC yes 49361494
chr16 27419607 27419611 LFA1 TRANSFAC yes 10193110
chr16 27419607 27419611 LFA1 TRANSFAC yes 49361495
chr16 27419611 27419617 GATA3 JASPAR yes 10193111
chr16 27419611 27419617 GATA3 JASPAR yes 49361496
chr16 27419617 27419623 ETS1 JASPAR yes 10193112
chr16 27419617 27419623 ETS1 JASPAR yes 49361497
chr16 27419641 27419650 SNAI2 JASPAR yes 10193113
chr16 27419641 27419650 SNAI2 JASPAR yes 49361498
chr16 27419641 27419651 FIGLA JASPAR yes 10193114
chr16 27419641 27419651 ID4 JASPAR yes 10193115
chr16 27419641 27419651 TCF3 JASPAR yes 10193116
chr16 27419641 27419651 TCF4 JASPAR yes 10193117
chr16 27419641 27419651 FIGLA JASPAR yes 49361499
chr16 27419641 27419651 ID4 JASPAR yes 49361500
chr16 27419641 27419651 TCF3 JASPAR yes 49361501
chr16 27419641 27419651 TCF4 JASPAR yes 49361502
chr16 27419643 27419652 ZEB1 JASPAR yes 10193118
chr16 27419643 27419652 ZEB1 JASPAR yes 49361503
chr16 27419656 27419665 ZEB1 JASPAR yes 10193119
chr16 27419656 27419665 ZEB1 JASPAR yes 49361504
chr16 27419682 27419686 NFE TRANSFAC yes 10193120
chr16 27419682 27419686 NFE TRANSFAC yes 49361505
chr16 27419688 27419698 SREBF1 JASPAR yes 10193121
chr16 27419688 27419698 SREBF2 JASPAR yes 10193122
chr16 27419688 27419698 SREBF1 JASPAR yes 49361506
chr16 27419688 27419698 SREBF2 JASPAR yes 49361507
SNP sites on vista22280[chr16:27419263-27419728]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 27419267 rs144291954 G A
POLR2A
4395967
chr16 27419317 rs72784337 C T
POLR2A RFX2 RFX3 RFX5
4395968
chr16 27419383 rs141252769 A C
JUND POLR2A RELA
4395969
chr16 27419428 rs143550423 TC T
AR FOSL2 JUND NFE NR3C1 NR3C2 POLR2A RELA
4395970
chr16 27419428 rs781342167 TC T
AR FOSL2 JUND NFE NR3C1 NR3C2 POLR2A RELA
4395971
chr16 27419514 rs28433001 C G
BATF FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2 POLR2A RELA
4395972
Genes possibly regulated by vista22280[chr16:27419263-27419728]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 27324989 27376099 + IL4R ENSG00000077238.9 27324989 0.79 1.0 14668 5726
chr16 27413483 27462115 + IL21R ENSG00000103522.11 27413483 0.98 1.0 14669 94220
Expression level of Genes
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miRNAs possibly regulated by vista22280[chr16:27419263-27419728]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results