EnhancerDB
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  3. vista22282[chr16:27532420-27532769]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22282[chr16:27532420-27532769]
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Tissue distribution of vista22282
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Transcription factor that possibly regulate vista22282[chr16:27532420-27532769]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 27532418 27532429 EBF1 JASPAR yes 10198339
chr16 27532418 27532429 EBF1 JASPAR yes 49361598
chr16 27532440 27532455 MEF2A JASPAR yes 10198340
chr16 27532440 27532455 MEF2A JASPAR yes 49361599
chr16 27532442 27532454 MEF2B JASPAR yes 10198341
chr16 27532442 27532454 MEF2B JASPAR yes 49361600
chr16 27532443 27532453 MEF2A JASPAR yes 10198342
chr16 27532443 27532453 MEF2A JASPAR yes 49361601
chr16 27532444 27532448 YY1 TRANSFAC yes 10198343
chr16 27532444 27532448 YY1 TRANSFAC yes 49361602
chr16 27532471 27532489 NR3C1 JASPAR yes 10198344
chr16 27532471 27532489 NR3C1 JASPAR yes 49361603
chr16 27532493 27532512 RFX2 JASPAR yes 10198345
chr16 27532493 27532512 RFX2 JASPAR yes 49361604
chr16 27532501 27532506 GATA2 JASPAR yes 10198346
chr16 27532501 27532506 GATA2 JASPAR yes 49361605
chr16 27532534 27532538 ESR1 TRANSFAC yes 10198347
chr16 27532534 27532538 ESR1 TRANSFAC yes 49361606
chr16 27532536 27532547 ELK4 JASPAR yes 10198348
chr16 27532536 27532547 FLI1 JASPAR yes 10198349
chr16 27532536 27532547 ELK4 JASPAR yes 49361607
chr16 27532536 27532547 FLI1 JASPAR yes 49361608
chr16 27532537 27532541 YY1 TRANSFAC yes 10198350
chr16 27532537 27532541 YY1 TRANSFAC yes 49361609
chr16 27532537 27532547 ERF JASPAR yes 10198351
chr16 27532537 27532547 ERG JASPAR yes 10198352
chr16 27532537 27532547 ETS1 JASPAR yes 10198353
chr16 27532537 27532547 FEV JASPAR yes 10198354
chr16 27532537 27532547 FLI1 JASPAR yes 10198355
chr16 27532537 27532547 ERF JASPAR yes 49361610
chr16 27532537 27532547 ERG JASPAR yes 49361611
chr16 27532537 27532547 ETS1 JASPAR yes 49361612
chr16 27532537 27532547 FEV JASPAR yes 49361613
chr16 27532537 27532547 FLI1 JASPAR yes 49361614
chr16 27532537 27532548 ETV2 JASPAR yes 10198356
chr16 27532537 27532548 ETV2 JASPAR yes 49361615
chr16 27532537 27532550 ELF1 JASPAR yes 10198357
chr16 27532537 27532550 ELF1 JASPAR yes 49361616
chr16 27532538 27532546 FEV JASPAR yes 10198358
chr16 27532538 27532546 FEV JASPAR yes 49361617
chr16 27532555 27532570 HSF1 JASPAR yes 10198359
chr16 27532555 27532570 HSF1 JASPAR yes 49361618
chr16 27532559 27532571 HES5 JASPAR yes 10198360
chr16 27532559 27532571 HES7 JASPAR yes 10198361
chr16 27532559 27532571 HES5 JASPAR yes 49361619
chr16 27532559 27532571 HES7 JASPAR yes 49361620
chr16 27532590 27532601 NFKB1 JASPAR yes 10198362
chr16 27532590 27532601 NFKB1 JASPAR yes 49361621
chr16 27532612 27532623 DUX4 JASPAR yes 10198363
chr16 27532612 27532623 DUX4 JASPAR yes 49361622
chr16 27532671 27532686 ZIC4 JASPAR yes 10198364
chr16 27532671 27532686 ZIC4 JASPAR yes 49361623
chr16 27532672 27532686 ZIC1 JASPAR yes 10198365
chr16 27532672 27532686 ZIC1 JASPAR yes 49361624
chr16 27532693 27532713 TP63 JASPAR yes 10198366
chr16 27532693 27532713 TP63 JASPAR yes 49361625
chr16 27532709 27532730 ZNF263 JASPAR yes 10198367
chr16 27532709 27532730 ZNF263 JASPAR yes 49361626
chr16 27532717 27532723 MZF1 JASPAR yes 10198368
chr16 27532717 27532723 MZF1 JASPAR yes 49361627
chr16 27532730 27532751 ZNF263 JASPAR yes 10198369
chr16 27532730 27532751 ZNF263 JASPAR yes 49361628
chr16 27532742 27532746 NFE TRANSFAC yes 10198370
chr16 27532742 27532746 NFE TRANSFAC yes 49361629
chr16 27532745 27532751 MZF1 JASPAR yes 10198371
chr16 27532745 27532751 MZF1 JASPAR yes 49361630
chr16 27532758 27532769 STAT1 JASPAR yes 10198372
chr16 27532758 27532769 STAT3 JASPAR yes 10198373
chr16 27532758 27532769 STAT1 JASPAR yes 49361631
chr16 27532758 27532769 STAT3 JASPAR yes 49361632
chr16 27532766 27532772 HiNF-A TRANSFAC yes 10198374
chr16 27532766 27532772 HiNF-A TRANSFAC yes 49361633
SNP sites on vista22282[chr16:27532420-27532769]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 27532441 rs576059200 G A
MEF2A
4396544
chr16 27532492 rs115304785 C A,G no 4396545
chr16 27532599 rs185247098 C A
NFKB1
4396546
chr16 27532633 rs144332223 A C no 4396547
chr16 27532694 rs147766998 C T
TP63
4396548
chr16 27532767 rs370988388 AAACAC A
HiNF-A STAT1 STAT3
4396549
chr16 27532767 rs534652817 AAACAC A
HiNF-A STAT1 STAT3
4396550
Genes possibly regulated by vista22282[chr16:27532420-27532769]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 27470876 27561234 - GTF3C1 ENSG00000077235.13 27561234 0.65 1.0 14670 71535
chr16 27561454 27791690 + KIAA0556 ENSG00000047578.8 27561454 0.78 1.0 14671 71315
Expression level of Genes
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miRNAs possibly regulated by vista22282[chr16:27532420-27532769]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results