EnhancerDB
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  3. vista22288[chr16:27577101-27577365]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22288[chr16:27577101-27577365]
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Tissue distribution of vista22288
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Transcription factor that possibly regulate vista22288[chr16:27577101-27577365]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 27577094 27577103 JDP2 JASPAR yes 10200257
chr16 27577094 27577103 JDP2 JASPAR yes 49361852
chr16 27577096 27577107 CDX2 JASPAR yes 10200258
chr16 27577096 27577107 CDX2 JASPAR yes 49361853
chr16 27577097 27577108 HOXA10 JASPAR yes 10200259
chr16 27577097 27577108 HOXC11 JASPAR yes 10200260
chr16 27577097 27577108 HOXC13 JASPAR yes 10200261
chr16 27577097 27577108 HOXA10 JASPAR yes 49361854
chr16 27577097 27577108 HOXC11 JASPAR yes 49361855
chr16 27577097 27577108 HOXC13 JASPAR yes 49361856
chr16 27577098 27577107 CDX1 JASPAR yes 10200262
chr16 27577098 27577107 CDX1 JASPAR yes 49361857
chr16 27577098 27577108 HOXA13 JASPAR yes 10200263
chr16 27577098 27577108 HOXB13 JASPAR yes 10200264
chr16 27577098 27577108 HOXC10 JASPAR yes 10200265
chr16 27577098 27577108 HOXD11 JASPAR yes 10200266
chr16 27577098 27577108 HOXD13 JASPAR yes 10200267
chr16 27577098 27577108 HOXA13 JASPAR yes 49361858
chr16 27577098 27577108 HOXB13 JASPAR yes 49361859
chr16 27577098 27577108 HOXC10 JASPAR yes 49361860
chr16 27577098 27577108 HOXD11 JASPAR yes 49361861
chr16 27577098 27577108 HOXD13 JASPAR yes 49361862
chr16 27577101 27577116 FOXP1 JASPAR yes 10200268
chr16 27577101 27577116 FOXP1 JASPAR yes 49361863
chr16 27577102 27577108 TBP TRANSFAC yes 10200269
chr16 27577102 27577108 TBP TRANSFAC yes 49361864
chr16 27577103 27577123 RREB1 JASPAR yes 10200270
chr16 27577103 27577123 RREB1 JASPAR yes 49361865
chr16 27577106 27577118 FOXC2 JASPAR yes 10200271
chr16 27577106 27577118 FOXC2 JASPAR yes 49361866
chr16 27577108 27577128 RREB1 JASPAR yes 10200272
chr16 27577108 27577128 RREB1 JASPAR yes 49361867
chr16 27577111 27577131 RREB1 JASPAR yes 10200273
chr16 27577111 27577131 RREB1 JASPAR yes 49361868
chr16 27577112 27577127 FOXP1 JASPAR yes 10200274
chr16 27577112 27577127 FOXP1 JASPAR yes 49361869
chr16 27577112 27577133 IRF1 JASPAR yes 10200275
chr16 27577112 27577133 IRF1 JASPAR yes 49361870
chr16 27577113 27577134 IRF1 JASPAR yes 10200276
chr16 27577113 27577134 IRF1 JASPAR yes 49361871
chr16 27577114 27577134 RREB1 JASPAR yes 10200277
chr16 27577114 27577134 RREB1 JASPAR yes 49361872
chr16 27577115 27577126 FOXP2 JASPAR yes 10200278
chr16 27577115 27577126 FOXP2 JASPAR yes 49361873
chr16 27577117 27577132 FOXP1 JASPAR yes 10200279
chr16 27577117 27577132 FOXP1 JASPAR yes 49361874
chr16 27577118 27577139 IRF1 JASPAR yes 10200280
chr16 27577118 27577139 IRF1 JASPAR yes 49361875
chr16 27577119 27577134 FOXP1 JASPAR yes 10200281
chr16 27577119 27577134 FOXP1 JASPAR yes 49361876
chr16 27577119 27577139 RREB1 JASPAR yes 10200282
chr16 27577119 27577139 RREB1 JASPAR yes 49361877
chr16 27577119 27577140 IRF1 JASPAR yes 10200283
chr16 27577119 27577140 IRF1 JASPAR yes 49361878
chr16 27577120 27577135 FOXP1 JASPAR yes 10200284
chr16 27577120 27577135 FOXP1 JASPAR yes 49361879
chr16 27577120 27577141 IRF1 JASPAR yes 10200285
chr16 27577120 27577141 IRF1 JASPAR yes 49361880
chr16 27577121 27577136 FOXP1 JASPAR yes 10200286
chr16 27577121 27577136 FOXP1 JASPAR yes 49361881
chr16 27577123 27577138 FOXP1 JASPAR yes 10200287
chr16 27577123 27577138 FOXP1 JASPAR yes 49361882
chr16 27577124 27577139 STAT2 JASPAR yes 10200288
chr16 27577124 27577139 STAT2 JASPAR yes 49361883
chr16 27577125 27577140 FOXP1 JASPAR yes 10200289
chr16 27577125 27577140 FOXP1 JASPAR yes 49361884
chr16 27577127 27577139 FOXC2 JASPAR yes 10200290
chr16 27577127 27577139 FOXC2 JASPAR yes 49361885
chr16 27577128 27577139 FOXP2 JASPAR yes 10200291
chr16 27577128 27577139 FOXP2 JASPAR yes 49361886
chr16 27577134 27577140 SOX10 JASPAR yes 10200292
chr16 27577134 27577140 SOX10 JASPAR yes 49361887
chr16 27577134 27577149 PRDM1 JASPAR yes 10200293
chr16 27577134 27577149 PRDM1 JASPAR yes 49361888
chr16 27577136 27577146 GABPA JASPAR yes 10200294
chr16 27577136 27577146 GABPA JASPAR yes 49361889
chr16 27577136 27577157 ZNF263 JASPAR yes 10200295
chr16 27577136 27577157 ZNF263 JASPAR yes 49361890
chr16 27577137 27577142 ETS2 TRANSFAC yes 10200296
chr16 27577137 27577142 ETS2 TRANSFAC yes 49361891
chr16 27577139 27577160 ZNF263 JASPAR yes 10200297
chr16 27577139 27577160 ZNF263 JASPAR yes 49361892
chr16 27577162 27577166 NFE TRANSFAC yes 10200298
chr16 27577162 27577166 NFE TRANSFAC yes 49361893
chr16 27577169 27577179 HMBOX1 JASPAR yes 10200299
chr16 27577169 27577179 HMBOX1 JASPAR yes 49361894
chr16 27577234 27577250 POU4F3 JASPAR yes 10200300
chr16 27577234 27577250 POU4F3 JASPAR yes 49361895
chr16 27577236 27577250 POU4F1 JASPAR yes 10200301
chr16 27577236 27577250 POU4F1 JASPAR yes 49361896
chr16 27577236 27577251 HNF1A JASPAR yes 10200302
chr16 27577236 27577251 HNF1A JASPAR yes 49361897
chr16 27577237 27577250 HNF1B JASPAR yes 10200303
chr16 27577237 27577250 HNF1B JASPAR yes 49361898
chr16 27577237 27577251 POU4F1 JASPAR yes 10200304
chr16 27577237 27577251 POU4F1 JASPAR yes 49361899
chr16 27577237 27577253 POU4F2 JASPAR yes 10200305
chr16 27577237 27577253 POU4F3 JASPAR yes 10200306
chr16 27577237 27577253 POU4F2 JASPAR yes 49361900
chr16 27577237 27577253 POU4F3 JASPAR yes 49361901
chr16 27577241 27577257 POU4F2 JASPAR yes 10200307
chr16 27577241 27577257 POU4F3 JASPAR yes 10200308
chr16 27577241 27577257 POU4F2 JASPAR yes 49361902
chr16 27577241 27577257 POU4F3 JASPAR yes 49361903
chr16 27577243 27577257 POU4F1 JASPAR yes 10200309
chr16 27577243 27577257 POU4F1 JASPAR yes 49361904
chr16 27577243 27577258 HNF1A JASPAR yes 10200310
chr16 27577243 27577258 HNF1A JASPAR yes 49361905
chr16 27577244 27577257 HNF1B JASPAR yes 10200311
chr16 27577244 27577257 HNF1B JASPAR yes 49361906
chr16 27577246 27577256 PAX3 JASPAR yes 10200312
chr16 27577246 27577256 PAX7 JASPAR yes 10200313
chr16 27577246 27577256 PAX3 JASPAR yes 49361907
chr16 27577246 27577256 PAX7 JASPAR yes 49361908
chr16 27577250 27577254 YY1 TRANSFAC yes 10200314
chr16 27577250 27577254 YY1 TRANSFAC yes 49361909
chr16 27577284 27577294 NFATC3 JASPAR yes 10200315
chr16 27577284 27577294 NFATC3 JASPAR yes 49361910
chr16 27577286 27577293 NFATC2 JASPAR yes 10200316
chr16 27577286 27577293 NFATC2 JASPAR yes 49361911
chr16 27577293 27577303 GSC JASPAR yes 10200317
chr16 27577293 27577303 GSC JASPAR yes 49361912
chr16 27577295 27577307 PBX1 JASPAR yes 10200318
chr16 27577295 27577307 PBX1 JASPAR yes 49361913
chr16 27577334 27577346 NHLH1 JASPAR yes 10200319
chr16 27577334 27577346 NHLH1 JASPAR yes 49361914
chr16 27577335 27577345 MSC JASPAR yes 10200320
chr16 27577335 27577345 MYF6 JASPAR yes 10200321
chr16 27577335 27577345 NHLH1 JASPAR yes 10200322
chr16 27577335 27577345 TFAP4 JASPAR yes 10200323
chr16 27577335 27577345 MSC JASPAR yes 49361915
chr16 27577335 27577345 MYF6 JASPAR yes 49361916
chr16 27577335 27577345 NHLH1 JASPAR yes 49361917
chr16 27577335 27577345 TFAP4 JASPAR yes 49361918
chr16 27577335 27577347 TAL1 JASPAR yes 10200324
chr16 27577335 27577347 TAL1 JASPAR yes 49361919
chr16 27577337 27577358 IRF1 JASPAR yes 10200325
chr16 27577337 27577358 IRF1 JASPAR yes 49361920
chr16 27577338 27577353 FOXP1 JASPAR yes 10200326
chr16 27577338 27577353 FOXP1 JASPAR yes 49361921
chr16 27577338 27577359 IRF1 JASPAR yes 10200327
chr16 27577338 27577359 IRF1 JASPAR yes 49361922
chr16 27577340 27577355 FOXP1 JASPAR yes 10200328
chr16 27577340 27577355 FOXP1 JASPAR yes 49361923
chr16 27577340 27577361 IRF1 JASPAR yes 10200329
chr16 27577340 27577361 IRF1 JASPAR yes 49361924
chr16 27577341 27577362 IRF1 JASPAR yes 10200330
chr16 27577341 27577362 IRF1 JASPAR yes 49361925
chr16 27577342 27577357 FOXP1 JASPAR yes 10200331
chr16 27577342 27577357 FOXP1 JASPAR yes 49361926
chr16 27577343 27577358 FOXP1 JASPAR yes 10200332
chr16 27577343 27577358 FOXP1 JASPAR yes 49361927
chr16 27577344 27577359 FOXP1 JASPAR yes 10200333
chr16 27577344 27577359 FOXP1 JASPAR yes 49361928
chr16 27577345 27577360 FOXP1 JASPAR yes 10200334
chr16 27577345 27577360 FOXP1 JASPAR yes 49361929
chr16 27577346 27577361 FOXP1 JASPAR yes 10200335
chr16 27577346 27577361 FOXP1 JASPAR yes 49361930
chr16 27577347 27577362 FOXP1 JASPAR yes 10200336
chr16 27577347 27577362 FOXP1 JASPAR yes 49361931
chr16 27577348 27577363 FOXP1 JASPAR yes 10200337
chr16 27577348 27577363 FOXP1 JASPAR yes 49361932
chr16 27577349 27577364 FOXP1 JASPAR yes 10200338
chr16 27577349 27577364 FOXP1 JASPAR yes 49361933
SNP sites on vista22288[chr16:27577101-27577365]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 27577109 rs149566247 A C
FOXC2 FOXP1 RREB1
4396736
chr16 27577123 rs532311546 C A
FOXP1 FOXP2 IRF1 RREB1
4396737
chr16 27577123 rs536556595 C CA
FOXP1 FOXP2 IRF1 RREB1
4396738
chr16 27577239 rs114732266 T A
HNF1A HNF1B POU4F1 POU4F2 POU4F3
4396739
chr16 27577343 rs200468514 GT G
FOXP1 IRF1 MSC MYF6 NHLH1 TAL1 TFAP4
4396740
chr16 27577346 rs534569752 T G
FOXP1 IRF1 NHLH1 TAL1
4396741
chr16 27577351 rs148376908 T G
FOXP1 IRF1
4396742
Genes possibly regulated by vista22288[chr16:27577101-27577365]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 27470876 27561234 - GTF3C1 ENSG00000077235.13 27561234 0.65 1.0 14670 84133
chr16 27561454 27791690 + KIAA0556 ENSG00000047578.8 27561454 0.78 1.0 14671 84353
Expression level of Genes
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miRNAs possibly regulated by vista22288[chr16:27577101-27577365]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results