EnhancerDB
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  3. vista22306[chr16:28543579-28543953]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22306[chr16:28543579-28543953]
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Tissue distribution of vista22306
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Transcription factor that possibly regulate vista22306[chr16:28543579-28543953]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 28543321 28544022 STAT1 UCSC Txn Factor no Conserved 108191007
chr16 28543583 28543600 RARA JASPAR yes 49362753
chr16 28543585 28543600 HNF4G JASPAR yes 49362754
chr16 28543585 28543600 NR2C2 JASPAR yes 49362755
chr16 28543586 28543600 RXRG JASPAR yes 49362756
chr16 28543586 28543601 HNF4A JASPAR yes 49362757
chr16 28543588 28543600 PKNOX1 JASPAR yes 49362758
chr16 28543588 28543600 TGIF1 JASPAR yes 49362759
chr16 28543591 28543604 NR2F1 JASPAR yes 49362760
chr16 28543595 28543599 ESR1 TRANSFAC yes 49362761
chr16 28543602 28543607 H4TF1 TRANSFAC yes 49362762
chr16 28543612 28543626 EBF1 JASPAR yes 49362763
chr16 28543614 28543625 EBF1 JASPAR yes 49362764
chr16 28543618 28543631 NFKB1 JASPAR yes 49362765
chr16 28543618 28543631 NFKB2 JASPAR yes 49362766
chr16 28543619 28543629 RELA JASPAR yes 49362767
chr16 28543619 28543630 NFKB1 JASPAR yes 49362768
chr16 28543619 28543632 NFKB1 JASPAR yes 49362769
chr16 28543619 28543632 NFKB2 JASPAR yes 49362770
chr16 28543620 28543630 NFKB1 JASPAR yes 49362771
chr16 28543620 28543631 NFKB1 JASPAR yes 49362772
chr16 28543621 28543631 RELA JASPAR yes 49362773
chr16 28543632 28543646 SPIC JASPAR yes 49362774
chr16 28543636 28543641 TFAP2A TRANSFAC yes 49362775
chr16 28543636 28543642 MZF1 JASPAR yes 49362776
chr16 28543652 28543673 IRF1 JASPAR yes 49362777
chr16 28543656 28543677 IRF1 JASPAR yes 49362778
chr16 28543657 28543672 FOXP1 JASPAR yes 49362779
chr16 28543660 28543674 STAT1 JASPAR yes 49362780
chr16 28543660 28543675 PRDM1 JASPAR yes 49362781
chr16 28543660 28543675 STAT2 JASPAR yes 49362782
chr16 28543682 28543703 ZNF263 JASPAR yes 49362783
chr16 28543683 28543704 ZNF263 JASPAR yes 49362784
chr16 28543686 28543707 ZNF263 JASPAR yes 49362785
chr16 28543694 28543708 SPI1 JASPAR yes 49362786
chr16 28543694 28543708 SPIC JASPAR yes 49362787
chr16 28543695 28543708 ELF1 JASPAR yes 49362788
chr16 28543698 28543705 SPIB JASPAR yes 49362789
chr16 28543698 28543708 GABPA JASPAR yes 49362790
chr16 28543698 28543719 ZNF263 JASPAR yes 49362791
chr16 28543742 28543757 STAT1 JASPAR yes 49362792
chr16 28543744 28543755 STAT1 JASPAR yes 49362793
chr16 28543744 28543755 STAT3 JASPAR yes 49362794
chr16 28543760 28543775 STAT1 JASPAR yes 49362795
chr16 28543762 28543773 STAT1 JASPAR yes 49362796
chr16 28543762 28543773 STAT3 JASPAR yes 49362797
chr16 28543774 28543783 NKX3-2 JASPAR yes 49362798
chr16 28543774 28543784 NKX2-3 JASPAR yes 49362799
chr16 28543775 28543783 ISL2 JASPAR yes 49362800
chr16 28543775 28543784 NKX2-8 JASPAR yes 49362801
chr16 28543784 28543797 TFAP2B JASPAR yes 49362802
chr16 28543824 28543835 NFKB1 JASPAR yes 49362803
chr16 28543825 28543840 NFYB JASPAR yes 49362804
chr16 28543827 28543843 NFYA JASPAR yes 49362805
chr16 28543828 28543846 NFYA JASPAR yes 49362806
chr16 28543829 28543846 RARA JASPAR yes 49362807
chr16 28543832 28543836 H1TF2 TRANSFAC yes 49362808
chr16 28543832 28543836 NFE TRANSFAC yes 49362809
chr16 28543832 28543836 SRF TRANSFAC yes 49362810
chr16 28543845 28543856 E2F6 JASPAR yes 49362811
chr16 28543847 28543855 SP1 TRANSFAC yes 49362812
chr16 28543847 28543857 SP1 JASPAR yes 49362813
chr16 28543847 28543868 ZNF263 JASPAR yes 49362814
chr16 28543849 28543855 MAZ TRANSFAC yes 49362815
chr16 28543853 28543863 SP1 JASPAR yes 49362816
chr16 28543854 28543858 LFA1 TRANSFAC yes 49362817
chr16 28543874 28543886 PKNOX1 JASPAR yes 49362818
chr16 28543874 28543886 PKNOX2 JASPAR yes 49362819
chr16 28543874 28543886 TGIF1 JASPAR yes 49362820
chr16 28543874 28543886 TGIF2 JASPAR yes 49362821
chr16 28543884 28543905 REST JASPAR yes 49362822
chr16 28543885 28543904 REST JASPAR yes 49362823
chr16 28543919 28543934 AR JASPAR yes 49362824
chr16 28543943 28543947 YY1 TRANSFAC yes 49362825
SNP sites on vista22306[chr16:28543579-28543953]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 28543584 rs142804103 G C
RARA STAT1
4399933
chr16 28543641 rs536669214 G A
MZF1 SPIC STAT1 TFAP2A
4399934
chr16 28543755 rs73533489 T C
STAT1 STAT3
4399935
chr16 28543766 rs541606318 C G
STAT1 STAT3
4399936
chr16 28543918 rs575017987 C T
STAT1
4399937
Genes possibly regulated by vista22306[chr16:28543579-28543953]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 28467693 28481868 - NPIPB7 ENSG00000233232.2 28481868 0.86 0.99 14677 38289
chr16 28477974 28503333 - CLN3 ENSG00000261832.1 28503333 0.96 0.0 14678 59754
chr16 28477983 28506896 - CLN3 ENSG00000188603.12 28506896 0.59 0.9 14679 63317
chr16 28505970 28510291 + APOBR ENSG00000184730.6 28505970 0.94 0.99 14680 62391
chr16 28510683 28523372 - IL27 ENSG00000197272.2 28523372 0.97 0.96 14681 79793
chr16 28548606 28550495 - NUPR1 ENSG00000176046.7 28550495 0.79 0.98 14682 93458
chr16 28565236 28603111 + CCDC101 ENSG00000176476.4 28565236 0.7 1.0 14683 78717
chr16 28603264 28608430 - SULT1A2 ENSG00000197165.6 28608430 0.96 0.96 14684 35523
chr16 28616903 28634946 - SULT1A1 ENSG00000196502.7 28634946 0.89 0.99 14685 9007
Expression level of Genes
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miRNAs possibly regulated by vista22306[chr16:28543579-28543953]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results