EnhancerDB
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  3. vista22310[chr16:28839972-28840187]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22310[chr16:28839972-28840187]
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Tissue distribution of vista22310
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Transcription factor that possibly regulate vista22310[chr16:28839972-28840187]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 28839977 28839981 H1TF2 TRANSFAC yes 49362923
chr16 28839977 28839981 NFE TRANSFAC yes 49362924
chr16 28839977 28839981 SRF TRANSFAC yes 49362925
chr16 28839981 28840002 IRF1 JASPAR yes 49362926
chr16 28839984 28839994 NFATC3 JASPAR yes 49362927
chr16 28839985 28839992 NFATC2 JASPAR yes 49362928
chr16 28840004 28840019 MEF2A JASPAR yes 49362929
chr16 28840005 28840020 MEF2C JASPAR yes 49362930
chr16 28840008 28840012 YY1 TRANSFAC yes 49362931
chr16 28840014 28840022 SP1 TRANSFAC yes 49362932
chr16 28840042 28840048 TCF4 TRANSFAC yes 49362933
chr16 28840048 28840068 RREB1 JASPAR yes 49362934
chr16 28840050 28840065 FOXA1 JASPAR yes 49362935
chr16 28840051 28840063 FOXI1 JASPAR yes 49362936
chr16 28840052 28840064 FOXC2 JASPAR yes 49362937
chr16 28840054 28840065 FOXA1 JASPAR yes 49362938
chr16 28840054 28840074 RREB1 JASPAR yes 49362939
chr16 28840054 28840075 IRF1 JASPAR yes 49362940
chr16 28840055 28840070 FOXP1 JASPAR yes 49362941
chr16 28840055 28840076 IRF1 JASPAR yes 49362942
chr16 28840056 28840071 STAT2 JASPAR yes 49362943
chr16 28840059 28840071 IRF1 JASPAR yes 49362944
chr16 28840059 28840073 IRF7 JASPAR yes 49362945
chr16 28840060 28840080 RREB1 JASPAR yes 49362946
chr16 28840060 28840081 IRF1 JASPAR yes 49362947
chr16 28840061 28840067 TCF4 TRANSFAC yes 49362948
chr16 28840061 28840076 FOXP1 JASPAR yes 49362949
chr16 28840061 28840082 IRF1 JASPAR yes 49362950
chr16 28840062 28840077 STAT2 JASPAR yes 49362951
chr16 28840065 28840077 IRF1 JASPAR yes 49362952
chr16 28840065 28840079 IRF7 JASPAR yes 49362953
chr16 28840066 28840086 RREB1 JASPAR yes 49362954
chr16 28840066 28840087 IRF1 JASPAR yes 49362955
chr16 28840067 28840073 TCF4 TRANSFAC yes 49362956
chr16 28840067 28840082 FOXP1 JASPAR yes 49362957
chr16 28840067 28840088 IRF1 JASPAR yes 49362958
chr16 28840068 28840083 STAT2 JASPAR yes 49362959
chr16 28840071 28840083 IRF1 JASPAR yes 49362960
chr16 28840073 28840079 TCF4 TRANSFAC yes 49362961
chr16 28840073 28840088 FOXP1 JASPAR yes 49362962
chr16 28840074 28840085 FOXP2 JASPAR yes 49362963
chr16 28840074 28840086 FOXC2 JASPAR yes 49362964
chr16 28840103 28840107 NFE TRANSFAC yes 49362965
chr16 28840142 28840152 SREBF1 JASPAR yes 49362966
chr16 28840144 28840161 ESR1 JASPAR yes 49362967
SNP sites on vista22310[chr16:28839972-28840187]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 28840056 rs201799408 GTTTGTT G
FOXA1 FOXC2 FOXI1 FOXP1 IRF1 RREB1 STAT2
4400770
chr16 28840100 rs377165858 C G no 4400771
Genes possibly regulated by vista22310[chr16:28839972-28840187]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 28763108 28784128 + NPIPB9 ENSG00000196993.4 28763108 0.86 0.99 14688 23136
chr16 28834356 28848558 + ATXN2L ENSG00000168488.14 28834356 0.65 1.0 14689 94384
chr16 28853732 28857729 - TUFM ENSG00000178952.4 28857729 0.57 1.0 14690 82458
chr16 28857921 28885526 + SH2B1 ENSG00000178188.10 28857921 0.68 1.0 14691 82266
chr16 28889726 28915830 + ATP2A1 ENSG00000196296.9 28889726 0.84 1.0 14692 50461
Expression level of Genes
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miRNAs possibly regulated by vista22310[chr16:28839972-28840187]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results