EnhancerDB
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  3. vista22327[chr16:29304451-29304624]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22327[chr16:29304451-29304624]
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Tissue distribution of vista22327
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Transcription factor that possibly regulate vista22327[chr16:29304451-29304624]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 29304456 29304462 NFE2 TRANSFAC yes 10258402
chr16 29304456 29304462 NFE2 TRANSFAC yes 49363712
chr16 29304461 29304469 MEIS3 JASPAR yes 10258403
chr16 29304461 29304469 MEIS3 JASPAR yes 49363713
chr16 29304461 29304473 IRF1 JASPAR yes 10258404
chr16 29304461 29304473 IRF1 JASPAR yes 49363714
chr16 29304462 29304466 NFE TRANSFAC yes 10258405
chr16 29304462 29304466 NFE TRANSFAC yes 49363715
chr16 29304476 29304480 YY1 TRANSFAC yes 10258406
chr16 29304476 29304480 YY1 TRANSFAC yes 49363716
chr16 29304510 29304529 RFX2 JASPAR yes 10258407
chr16 29304510 29304529 RFX2 JASPAR yes 49363717
chr16 29304527 29304537 SP1 JASPAR yes 10258408
chr16 29304527 29304537 SP1 JASPAR yes 49363718
chr16 29304546 29304560 ONECUT1 JASPAR yes 10258409
chr16 29304546 29304560 ONECUT2 JASPAR yes 10258410
chr16 29304546 29304560 ONECUT1 JASPAR yes 49363719
chr16 29304546 29304560 ONECUT2 JASPAR yes 49363720
chr16 29304559 29304573 PLAG1 JASPAR yes 10258411
chr16 29304559 29304573 PLAG1 JASPAR yes 49363721
chr16 29304573 29304582 NKX2-8 JASPAR yes 10258412
chr16 29304573 29304582 NKX2-8 JASPAR yes 49363722
chr16 29304573 29304583 NKX2-3 JASPAR yes 10258413
chr16 29304573 29304583 NKX2-3 JASPAR yes 49363723
chr16 29304574 29304582 ISL2 JASPAR yes 10258414
chr16 29304574 29304582 ISL2 JASPAR yes 49363724
chr16 29304574 29304583 NKX3-2 JASPAR yes 10258415
chr16 29304574 29304583 NKX3-2 JASPAR yes 49363725
chr16 29304576 29304591 TFAP2A JASPAR yes 10258416
chr16 29304576 29304591 TFAP2C JASPAR yes 10258417
chr16 29304576 29304591 TFAP2A JASPAR yes 49363726
chr16 29304576 29304591 TFAP2C JASPAR yes 49363727
chr16 29304579 29304590 EBF1 JASPAR yes 10258418
chr16 29304579 29304590 TFAP2A JASPAR yes 10258419
chr16 29304579 29304590 TFAP2B JASPAR yes 10258420
chr16 29304579 29304590 TFAP2C JASPAR yes 10258421
chr16 29304579 29304590 EBF1 JASPAR yes 49363728
chr16 29304579 29304590 TFAP2A JASPAR yes 49363729
chr16 29304579 29304590 TFAP2B JASPAR yes 49363730
chr16 29304579 29304590 TFAP2C JASPAR yes 49363731
chr16 29304580 29304589 TFAP2A JASPAR yes 10258422
chr16 29304580 29304589 TFAP2A JASPAR yes 49363732
chr16 29304587 29304593 PEA3 TRANSFAC yes 10258423
chr16 29304587 29304593 PEA3 TRANSFAC yes 49363733
chr16 29304595 29304609 TLX1 JASPAR yes 10258424
chr16 29304595 29304609 TLX1 JASPAR yes 49363734
chr16 29304606 29304627 ZNF263 JASPAR yes 10258425
chr16 29304606 29304627 ZNF263 JASPAR yes 49363735
chr16 29304622 29304626 YY1 TRANSFAC yes 10258426
chr16 29304622 29304626 YY1 TRANSFAC yes 49363736
SNP sites on vista22327[chr16:29304451-29304624]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 29304459 rs149694258 GC G
NFE2
4403881
chr16 29304547 rs202053718 CA C
ONECUT1 ONECUT2
4403882
chr16 29304552 rs4402599 C G
ONECUT1 ONECUT2
4403883
chr16 29304561 rs569029379 C T
PLAG1
4403884
chr16 29304623 rs114466316 C T
YY1 ZNF263
4403885
Genes possibly regulated by vista22327[chr16:29304451-29304624]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista22327[chr16:29304451-29304624]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results