EnhancerDB
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  3. vista22744[chr16:66300602-66300832]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22744[chr16:66300602-66300832]
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Tissue distribution of vista22744
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Transcription factor that possibly regulate vista22744[chr16:66300602-66300832]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 66300607 66300612 SP1 TRANSFAC yes 11107518
chr16 66300607 66300612 SP1 TRANSFAC yes 49383169
chr16 66300621 66300639 NFYA JASPAR yes 11107519
chr16 66300621 66300639 NFYA JASPAR yes 49383170
chr16 66300629 66300649 RREB1 JASPAR yes 11107520
chr16 66300629 66300649 RREB1 JASPAR yes 49383171
chr16 66300633 66300643 SP1 JASPAR yes 11107521
chr16 66300633 66300643 SP1 JASPAR yes 49383172
chr16 66300633 66300653 RREB1 JASPAR yes 11107522
chr16 66300633 66300653 RREB1 JASPAR yes 49383173
chr16 66300634 66300644 SP1 JASPAR yes 11107523
chr16 66300634 66300644 SP1 JASPAR yes 49383174
chr16 66300636 66300646 ZNF740 JASPAR yes 11107524
chr16 66300636 66300646 ZNF740 JASPAR yes 49383175
chr16 66300653 66300657 H4TF2 TRANSFAC yes 11107525
chr16 66300653 66300657 H4TF2 TRANSFAC yes 49383176
chr16 66300703 66300715 NHLH1 JASPAR yes 11107526
chr16 66300703 66300715 NHLH1 JASPAR yes 49383177
chr16 66300704 66300714 NHLH1 JASPAR yes 11107527
chr16 66300704 66300714 NHLH1 JASPAR yes 49383178
chr16 66300722 66300735 ZBTB18 JASPAR yes 11107528
chr16 66300722 66300735 ZBTB18 JASPAR yes 49383179
chr16 66300757 66300770 TFAP2A JASPAR yes 11107529
chr16 66300757 66300770 TFAP2B JASPAR yes 11107530
chr16 66300757 66300770 TFAP2C JASPAR yes 11107531
chr16 66300757 66300770 TFAP2A JASPAR yes 49383180
chr16 66300757 66300770 TFAP2B JASPAR yes 49383181
chr16 66300757 66300770 TFAP2C JASPAR yes 49383182
chr16 66300789 66300797 MEIS2 JASPAR yes 11107532
chr16 66300789 66300797 MEIS3 JASPAR yes 11107533
chr16 66300789 66300797 MEIS2 JASPAR yes 49383183
chr16 66300789 66300797 MEIS3 JASPAR yes 49383184
chr16 66300796 66300811 TFAP2A JASPAR yes 11107534
chr16 66300796 66300811 TFAP2C JASPAR yes 11107535
chr16 66300796 66300811 TFAP2A JASPAR yes 49383185
chr16 66300796 66300811 TFAP2C JASPAR yes 49383186
chr16 66300799 66300811 TFAP2C JASPAR yes 11107536
chr16 66300799 66300811 TFAP2C JASPAR yes 49383187
chr16 66300800 66300809 TFAP2A JASPAR yes 11107537
chr16 66300800 66300809 TFAP2A JASPAR yes 49383188
chr16 66300805 66300810 SP1 TRANSFAC yes 11107538
chr16 66300805 66300810 SP1 TRANSFAC yes 49383189
chr16 66300826 66300846 RREB1 JASPAR yes 11107539
chr16 66300826 66300846 RREB1 JASPAR yes 49383190
SNP sites on vista22744[chr16:66300602-66300832]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 66300611 rs148577307 C T
SP1
4491494
chr16 66300663 rs564448821 A G no 4491495
chr16 66300705 rs529221222 A G
NHLH1
4491496
chr16 66300748 rs142994560 G A no 4491497
chr16 66300767 rs7200209 G A
TFAP2A TFAP2B TFAP2C
4491498
chr16 66300806 rs191527738 G A
SP1 TFAP2A TFAP2C
4491499
Genes possibly regulated by vista22744[chr16:66300602-66300832]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 66400533 66438686 + CDH5 ENSG00000179776.13 66400533 0.91 0.99 14912 299
Expression level of Genes
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miRNAs possibly regulated by vista22744[chr16:66300602-66300832]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results