EnhancerDB
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  3. vista22826[chr16:68544131-68544336]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22826[chr16:68544131-68544336]
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Tissue distribution of vista22826
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Transcription factor that possibly regulate vista22826[chr16:68544131-68544336]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 68544056 68544435 CTCF UCSC Txn Factor no Conserved 108202683
chr16 68544115 68544392 SMC3 UCSC Txn Factor no Conserved 108202693
chr16 68544119 68544397 RAD21 UCSC Txn Factor no Conserved 108202695
chr16 68544149 68544372 POLR2A UCSC Txn Factor no Conserved 108202709
chr16 68544125 68544136 ESRRA JASPAR yes 11207860
chr16 68544125 68544136 ESRRA JASPAR yes 49386939
chr16 68544134 68544155 ZNF263 JASPAR yes 11207862
chr16 68544134 68544155 ZNF263 JASPAR yes 49386940
chr16 68544135 68544150 PRDM1 JASPAR yes 11207863
chr16 68544135 68544150 PRDM1 JASPAR yes 49386941
chr16 68544142 68544153 E2F6 JASPAR yes 11207864
chr16 68544142 68544153 E2F6 JASPAR yes 49386942
chr16 68544203 68544219 ZNF143 JASPAR yes 11207865
chr16 68544203 68544219 ZNF143 JASPAR yes 49386943
chr16 68544223 68544238 ZBTB33 JASPAR yes 11207866
chr16 68544223 68544238 ZBTB33 JASPAR yes 49386944
chr16 68544234 68544245 TFAP2A JASPAR yes 11207867
chr16 68544234 68544245 TFAP2B JASPAR yes 11207868
chr16 68544234 68544245 TFAP2C JASPAR yes 11207869
chr16 68544234 68544245 TFAP2A JASPAR yes 49386945
chr16 68544234 68544245 TFAP2B JASPAR yes 49386946
chr16 68544234 68544245 TFAP2C JASPAR yes 49386947
chr16 68544235 68544244 TFAP2A JASPAR yes 11207870
chr16 68544235 68544244 TFAP2A JASPAR yes 49386948
chr16 68544240 68544259 CTCF JASPAR yes 11207871
chr16 68544240 68544259 CTCF JASPAR yes 49386949
chr16 68544243 68544257 ZIC1 JASPAR yes 11207872
chr16 68544243 68544257 ZIC1 JASPAR yes 49386950
chr16 68544243 68544258 ZIC3 JASPAR yes 11207873
chr16 68544243 68544258 ZIC4 JASPAR yes 11207874
chr16 68544243 68544258 ZIC3 JASPAR yes 49386951
chr16 68544243 68544258 ZIC4 JASPAR yes 49386952
chr16 68544265 68544277 NHLH1 JASPAR yes 11207875
chr16 68544265 68544277 NHLH1 JASPAR yes 49386953
chr16 68544266 68544276 NHLH1 JASPAR yes 11207876
chr16 68544266 68544276 NHLH1 JASPAR yes 49386954
chr16 68544287 68544294 CEBPA TRANSFAC yes 11207877
chr16 68544287 68544294 CEBPA TRANSFAC yes 49386955
chr16 68544322 68544332 ELK1 JASPAR yes 11207878
chr16 68544322 68544332 ELK1 JASPAR yes 49386956
chr16 68544323 68544334 ETV2 JASPAR yes 11207879
chr16 68544323 68544334 ETV2 JASPAR yes 49386957
chr16 68544324 68544333 ELK4 JASPAR yes 11207880
chr16 68544324 68544333 ELK4 JASPAR yes 49386958
chr16 68544324 68544334 NFATC3 JASPAR yes 11207881
chr16 68544324 68544334 NFATC3 JASPAR yes 49386959
chr16 68544326 68544332 ETS1 JASPAR yes 11207882
chr16 68544326 68544332 ETS1 JASPAR yes 49386960
chr16 68544335 68544347 INSM1 JASPAR yes 11207883
chr16 68544335 68544347 INSM1 JASPAR yes 49386961
SNP sites on vista22826[chr16:68544131-68544336]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 68544161 rs201199286 G A
CTCF POLR2A RAD21 SMC3
4501022
chr16 68544174 rs189467377 G A
CTCF POLR2A RAD21 SMC3
4501023
chr16 68544194 rs533118071 C A,G
CTCF POLR2A RAD21 SMC3
4501024
chr16 68544240 rs546728063 C T
CTCF POLR2A RAD21 SMC3 TFAP2A TFAP2B TFAP2C
4501025
Genes possibly regulated by vista22826[chr16:68544131-68544336]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 68392231 68482591 - SMPD3 ENSG00000103056.7 68482591 0.98 1.0 14990 38460
chr16 68563993 68609975 + ZFP90 ENSG00000184939.11 68563993 0.71 0.99 14991 80343
Expression level of Genes
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miRNAs possibly regulated by vista22826[chr16:68544131-68544336]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results