EnhancerDB
  1. Home
  2. Enhancers
  3. vista22901[chr16:71401090-71401386]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22901[chr16:71401090-71401386]
Back to top
Tissue distribution of vista22901
Back to top
Transcription factor that possibly regulate vista22901[chr16:71401090-71401386]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 71401310 71401670 CTCF UCSC Txn Factor no Conserved 108205334
chr16 71401341 71401614 RAD21 UCSC Txn Factor no Conserved 108205339
chr16 71401100 71401120 PPARG JASPAR yes 49390185
chr16 71401108 71401121 SMAD2 JASPAR yes 49390186
chr16 71401112 71401133 ZNF263 JASPAR yes 49390187
chr16 71401142 71401152 ERF JASPAR yes 49390188
chr16 71401142 71401152 ERG JASPAR yes 49390189
chr16 71401142 71401152 ETS1 JASPAR yes 49390190
chr16 71401142 71401153 FLI1 JASPAR yes 49390191
chr16 71401142 71401157 RUNX2 JASPAR yes 49390192
chr16 71401143 71401150 PEA3 TRANSFAC yes 49390193
chr16 71401153 71401167 GATA2 JASPAR yes 49390194
chr16 71401154 71401163 GATA1 TRANSFAC yes 49390195
chr16 71401155 71401161 GATA1 TRANSFAC yes 49390196
chr16 71401155 71401163 GATA5 JASPAR yes 49390197
chr16 71401172 71401191 RFX2 JASPAR yes 49390198
chr16 71401174 71401189 RFX5 JASPAR yes 49390199
chr16 71401176 71401192 RFX2 JASPAR yes 49390200
chr16 71401176 71401192 RFX3 JASPAR yes 49390201
chr16 71401176 71401192 RFX4 JASPAR yes 49390202
chr16 71401176 71401192 RFX5 JASPAR yes 49390203
chr16 71401177 71401196 RFX2 JASPAR yes 49390204
chr16 71401179 71401194 RFX5 JASPAR yes 49390205
chr16 71401187 71401190 MYB TRANSFAC yes 49390206
chr16 71401197 71401211 ONECUT2 JASPAR yes 49390207
chr16 71401197 71401211 ONECUT3 JASPAR yes 49390208
chr16 71401210 71401220 CUX1 JASPAR yes 49390209
chr16 71401216 71401225 HIC2 JASPAR yes 49390210
chr16 71401249 71401259 SREBF1 JASPAR yes 49390211
chr16 71401249 71401259 SREBF2 JASPAR yes 49390212
chr16 71401253 71401268 ZIC3 JASPAR yes 49390213
chr16 71401266 71401276 RORA JASPAR yes 49390214
chr16 71401268 71401286 ESR2 JASPAR yes 49390215
chr16 71401271 71401275 ESR1 TRANSFAC yes 49390216
chr16 71401283 71401293 SREBF2 JASPAR yes 49390217
chr16 71401333 71401339 SP1 TRANSFAC yes 49390218
chr16 71401333 71401343 SP1 JASPAR yes 49390219
chr16 71401333 71401354 ZNF263 JASPAR yes 49390220
chr16 71401334 71401355 ZNF263 JASPAR yes 49390221
chr16 71401355 71401369 GATA2 JASPAR yes 49390222
chr16 71401357 71401363 GATA1 TRANSFAC yes 49390223
chr16 71401357 71401365 GATA5 JASPAR yes 49390224
chr16 71401363 71401374 ELK4 JASPAR yes 49390225
chr16 71401363 71401374 FLI1 JASPAR yes 49390226
SNP sites on vista22901[chr16:71401090-71401386]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 71401122 rs529703070 C T
ZNF263
4513935
chr16 71401194 rs370072542 CGTCTTTATCGAT C
RFX2 RFX5
4513936
chr16 71401194 rs372767721 CGTCTTTATCGAT C
RFX2 RFX5
4513937
chr16 71401239 rs185495197 C G no 4513938
Genes possibly regulated by vista22901[chr16:71401090-71401386]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 71315292 71323618 - CMTR2 ENSG00000180917.12 71323618 0.81 0.99 15034 22528
chr16 71392616 71424341 + CALB2 ENSG00000172137.14 71392616 0.92 1.0 15035 91526
chr16 71481500 71496998 - ZNF23 ENSG00000167377.13 71496998 0.65 0.97 15036 4388
Expression level of Genes
Back to top
miRNAs possibly regulated by vista22901[chr16:71401090-71401386]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results