EnhancerDB
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  3. vista23113[chr16:80965900-80966145]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23113[chr16:80965900-80966145]
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Tissue distribution of vista23113
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Transcription factor that possibly regulate vista23113[chr16:80965900-80966145]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 80965666 80967101 POLR2A UCSC Txn Factor no Conserved 108208851
chr16 80965881 80965902 IRF1 JASPAR yes 11803407
chr16 80965881 80965902 IRF1 JASPAR yes 49398910
chr16 80965885 80965900 PRDM1 JASPAR yes 11803408
chr16 80965885 80965900 PRDM1 JASPAR yes 49398911
chr16 80965897 80965912 NR2C2 JASPAR yes 11803409
chr16 80965897 80965912 NR2C2 JASPAR yes 49398912
chr16 80965899 80965920 ZNF263 JASPAR yes 11803410
chr16 80965899 80965920 ZNF263 JASPAR yes 49398913
chr16 80965900 80965904 LFA1 TRANSFAC yes 11803411
chr16 80965900 80965904 LFA1 TRANSFAC yes 49398914
chr16 80965918 80965935 RXRA JASPAR yes 11803412
chr16 80965918 80965935 RXRA JASPAR yes 49398915
chr16 80965918 80965939 ZNF263 JASPAR yes 11803413
chr16 80965918 80965939 ZNF263 JASPAR yes 49398916
chr16 80965928 80965946 RARA JASPAR yes 11803414
chr16 80965928 80965946 RARA JASPAR yes 49398917
chr16 80965953 80965963 SP1 JASPAR yes 11803415
chr16 80965953 80965963 SP1 JASPAR yes 49398918
chr16 80965954 80965964 SP1 JASPAR yes 11803416
chr16 80965954 80965964 SP1 JASPAR yes 49398919
chr16 80965956 80965962 MAZ TRANSFAC yes 11803417
chr16 80965956 80965962 MAZ TRANSFAC yes 49398920
chr16 80965960 80965964 LFA1 TRANSFAC yes 11803418
chr16 80965960 80965964 LFA1 TRANSFAC yes 49398921
chr16 80966003 80966017 PLAG1 JASPAR yes 11803419
chr16 80966003 80966017 PLAG1 JASPAR yes 49398922
chr16 80966003 80966024 ZNF263 JASPAR yes 11803420
chr16 80966003 80966024 ZNF263 JASPAR yes 49398923
chr16 80966004 80966009 SP1 TRANSFAC yes 11803421
chr16 80966004 80966009 SP1 TRANSFAC yes 49398924
chr16 80966004 80966025 ZNF263 JASPAR yes 11803422
chr16 80966004 80966025 ZNF263 JASPAR yes 49398925
chr16 80966012 80966022 SP1 JASPAR yes 11803423
chr16 80966012 80966022 SP1 JASPAR yes 49398926
chr16 80966050 80966067 RXRA JASPAR yes 11803424
chr16 80966050 80966067 RXRA JASPAR yes 49398927
chr16 80966060 80966074 RORA JASPAR yes 11803425
chr16 80966060 80966074 RORA JASPAR yes 49398928
chr16 80966061 80966071 RORA JASPAR yes 11803426
chr16 80966061 80966071 RORA JASPAR yes 49398929
chr16 80966069 80966081 INSM1 JASPAR yes 11803427
chr16 80966069 80966081 INSM1 JASPAR yes 49398930
chr16 80966074 80966079 SP1 TRANSFAC yes 11803428
chr16 80966074 80966079 SP1 TRANSFAC yes 49398931
chr16 80966114 80966123 TFAP2A JASPAR yes 11803429
chr16 80966114 80966123 TFAP2A JASPAR yes 49398932
chr16 80966120 80966131 TFAP2A JASPAR yes 11803430
chr16 80966120 80966131 TFAP2B JASPAR yes 11803431
chr16 80966120 80966131 TFAP2A JASPAR yes 49398933
chr16 80966120 80966131 TFAP2B JASPAR yes 49398934
chr16 80966121 80966130 TFAP2A JASPAR yes 11803432
chr16 80966121 80966130 TFAP2A JASPAR yes 49398935
SNP sites on vista23113[chr16:80965900-80966145]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 80966027 rs183523332 C T
POLR2A
4577932
chr16 80966060 rs143887445 G A
POLR2A RORA RXRA
4577933
chr16 80966127 rs34459368 G T
POLR2A TFAP2A TFAP2B
4577934
chr16 80966137 rs12716901 C A,G
POLR2A
4577935
Genes possibly regulated by vista23113[chr16:80965900-80966145]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 81009698 81053875 - CMC2 ENSG00000103121.4 81053875 0.86 1.0 15094 12270
chr16 81040103 81066719 + CENPN ENSG00000166451.9 81040103 0.89 1.0 15095 26042
Expression level of Genes
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miRNAs possibly regulated by vista23113[chr16:80965900-80966145]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results