EnhancerDB
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  3. vista23198[chr16:82687139-82687406]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23198[chr16:82687139-82687406]
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Tissue distribution of vista23198
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Transcription factor that possibly regulate vista23198[chr16:82687139-82687406]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 82686954 82688121 POLR2A UCSC Txn Factor no Conserved 108211048
chr16 82686954 82688121 POLR2A UCSC Txn Factor no Conserved 108211049
chr16 82687312 82688102 IKZF1 UCSC Txn Factor no Conserved 108211054
chr16 82687312 82688102 IKZF1 UCSC Txn Factor no Conserved 108211055
chr16 82687335 82687930 NFIC UCSC Txn Factor no Conserved 108211056
chr16 82687335 82687930 NFIC UCSC Txn Factor no Conserved 108211057
chr16 82687404 82687940 RUNX3 UCSC Txn Factor no Conserved 108211062
chr16 82687404 82687940 RUNX3 UCSC Txn Factor no Conserved 108211063
chr16 82687171 82687188 PAX1 JASPAR yes 11904529
chr16 82687171 82687188 PAX1 JASPAR yes 49403084
chr16 82687172 82687186 PAX6 JASPAR yes 11904530
chr16 82687172 82687186 PAX6 JASPAR yes 49403085
chr16 82687176 82687188 INSM1 JASPAR yes 11904531
chr16 82687176 82687188 INSM1 JASPAR yes 49403086
chr16 82687183 82687188 ETS2 TRANSFAC yes 11904532
chr16 82687183 82687188 ETS2 TRANSFAC yes 49403087
chr16 82687205 82687219 TLX1 JASPAR yes 11904533
chr16 82687205 82687219 TLX1 JASPAR yes 49403088
chr16 82687210 82687225 HNF4G JASPAR yes 11904534
chr16 82687210 82687225 HNF4G JASPAR yes 49403089
chr16 82687211 82687226 HNF4A JASPAR yes 11904535
chr16 82687211 82687226 HNF4A JASPAR yes 49403090
chr16 82687224 82687245 ZNF263 JASPAR yes 11904536
chr16 82687224 82687245 ZNF263 JASPAR yes 49403091
chr16 82687238 82687249 E2F6 JASPAR yes 11904537
chr16 82687238 82687249 E2F6 JASPAR yes 49403092
chr16 82687240 82687261 ZNF263 JASPAR yes 11904538
chr16 82687240 82687261 ZNF263 JASPAR yes 49403093
chr16 82687243 82687264 ZNF263 JASPAR yes 11904539
chr16 82687243 82687264 ZNF263 JASPAR yes 49403094
chr16 82687252 82687272 RREB1 JASPAR yes 11904540
chr16 82687252 82687272 RREB1 JASPAR yes 49403095
chr16 82687253 82687259 MAZ TRANSFAC yes 11904541
chr16 82687253 82687259 MAZ TRANSFAC yes 49403096
chr16 82687255 82687265 ZNF740 JASPAR yes 11904542
chr16 82687255 82687265 ZNF740 JASPAR yes 49403097
chr16 82687256 82687274 NFYA JASPAR yes 11904543
chr16 82687256 82687274 NFYA JASPAR yes 49403098
chr16 82687261 82687267 ZNF354C JASPAR yes 11904544
chr16 82687261 82687267 ZNF354C JASPAR yes 49403099
chr16 82687264 82687269 NFY TRANSFAC yes 11904545
chr16 82687264 82687269 NFY TRANSFAC yes 49403100
chr16 82687265 82687275 HMBOX1 JASPAR yes 11904546
chr16 82687265 82687275 HMBOX1 JASPAR yes 49403101
chr16 82687308 82687313 H4TF1 TRANSFAC yes 11904547
chr16 82687308 82687313 H4TF1 TRANSFAC yes 49403102
chr16 82687314 82687325 EBF1 JASPAR yes 11904548
chr16 82687314 82687325 EBF1 JASPAR yes 49403103
chr16 82687319 82687340 ZNF263 JASPAR yes 11904549
chr16 82687319 82687340 ZNF263 JASPAR yes 49403104
chr16 82687332 82687342 MZF1 JASPAR yes 11904550
chr16 82687332 82687342 MZF1 JASPAR yes 49403105
chr16 82687338 82687349 NFKB1 JASPAR yes 11904551
chr16 82687338 82687349 NFKB1 JASPAR yes 49403106
chr16 82687345 82687366 REST JASPAR yes 11904552
chr16 82687345 82687366 REST JASPAR yes 49403107
chr16 82687346 82687365 REST JASPAR yes 11904553
chr16 82687346 82687365 REST JASPAR yes 49403108
chr16 82687375 82687385 RELA JASPAR yes 11904554
chr16 82687375 82687385 REL JASPAR yes 11904555
chr16 82687375 82687385 RELA JASPAR yes 49403109
chr16 82687375 82687385 REL JASPAR yes 49403110
chr16 82687375 82687386 NFKB1 JASPAR yes 11904556
chr16 82687375 82687386 NFKB1 JASPAR yes 49403111
chr16 82687378 82687388 NFATC3 JASPAR yes 11904557
chr16 82687378 82687388 NFATC3 JASPAR yes 49403112
chr16 82687379 82687386 NFATC2 JASPAR yes 11904558
chr16 82687379 82687386 NFATC2 JASPAR yes 49403113
chr16 82687383 82687387 H1TF2 TRANSFAC yes 11904559
chr16 82687383 82687387 NFE TRANSFAC yes 11904560
chr16 82687383 82687387 SRF TRANSFAC yes 11904561
chr16 82687383 82687387 H1TF2 TRANSFAC yes 49403114
chr16 82687383 82687387 NFE TRANSFAC yes 49403115
chr16 82687383 82687387 SRF TRANSFAC yes 49403116
chr16 82687391 82687411 TP63 JASPAR yes 11904562
chr16 82687391 82687411 TP63 JASPAR yes 49403117
chr16 82687392 82687410 TP53 JASPAR yes 11904563
chr16 82687392 82687410 TP73 JASPAR yes 11904564
chr16 82687392 82687410 TP53 JASPAR yes 49403118
chr16 82687392 82687410 TP73 JASPAR yes 49403119
chr16 82687394 82687409 TP53 JASPAR yes 11904565
chr16 82687394 82687409 TP53 JASPAR yes 49403120
SNP sites on vista23198[chr16:82687139-82687406]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 82687157 rs114313137 T C
POLR2A
4594567
chr16 82687182 rs181955254 G A,C
INSM1 PAX1 PAX6 POLR2A
4594568
chr16 82687284 rs114993698 T A
POLR2A
4594569
chr16 82687293 rs183671666 C A
POLR2A
4594570
chr16 82687370 rs8046437 T C
IKZF1 NFIC POLR2A
4594571
chr16 82687386 rs8062745 A T
H1TF2 IKZF1 NFATC2 NFATC3 NFE NFIC NFKB1 POLR2A SRF
4594572
Genes possibly regulated by vista23198[chr16:82687139-82687406]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 82660408 83830204 + CDH13 ENSG00000140945.11 82660408 0.92 0.96 15106 73269
Expression level of Genes
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miRNAs possibly regulated by vista23198[chr16:82687139-82687406]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results