EnhancerDB
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  3. vista23217[chr16:83790064-83790448]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23217[chr16:83790064-83790448]
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Tissue distribution of vista23217
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Transcription factor that possibly regulate vista23217[chr16:83790064-83790448]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 83790064 83790079 TFAP2A JASPAR yes 49404203
chr16 83790076 83790086 NEUROD2 JASPAR yes 49404204
chr16 83790076 83790086 OLIG1 JASPAR yes 49404205
chr16 83790076 83790086 OLIG2 JASPAR yes 49404206
chr16 83790076 83790086 OLIG3 JASPAR yes 49404207
chr16 83790077 83790089 SRF JASPAR yes 49404208
chr16 83790114 83790122 HOXA5 JASPAR yes 49404209
chr16 83790142 83790146 YY1 TRANSFAC yes 49404210
chr16 83790142 83790153 CEBPA JASPAR yes 49404211
chr16 83790143 83790154 CEBPB JASPAR yes 49404212
chr16 83790152 83790170 E2F3 JASPAR yes 49404213
chr16 83790153 83790169 E2F2 JASPAR yes 49404214
chr16 83790155 83790162 E2F1 TRANSFAC yes 49404215
chr16 83790155 83790163 E2F1 JASPAR yes 49404216
chr16 83790155 83790167 E2F1 JASPAR yes 49404217
chr16 83790165 83790175 HOXA13 JASPAR yes 49404218
chr16 83790165 83790175 HOXB13 JASPAR yes 49404219
chr16 83790165 83790175 HOXD13 JASPAR yes 49404220
chr16 83790165 83790176 HOXA10 JASPAR yes 49404221
chr16 83790166 83790175 CDX1 JASPAR yes 49404222
chr16 83790166 83790177 CDX2 JASPAR yes 49404223
chr16 83790196 83790207 FOXH1 JASPAR yes 49404224
chr16 83790232 83790236 H1TF2 TRANSFAC yes 49404225
chr16 83790232 83790236 NFE TRANSFAC yes 49404226
chr16 83790232 83790236 SRF TRANSFAC yes 49404227
chr16 83790245 83790250 ETS2 TRANSFAC yes 49404228
chr16 83790257 83790262 NFY TRANSFAC yes 49404229
chr16 83790275 83790289 STAT1 JASPAR yes 49404230
chr16 83790294 83790312 RARA JASPAR yes 49404231
chr16 83790307 83790311 YY1 TRANSFAC yes 49404232
chr16 83790307 83790318 CEBPB JASPAR yes 49404233
chr16 83790308 83790319 CEBPA JASPAR yes 49404234
chr16 83790400 83790421 IRF1 JASPAR yes 49404235
chr16 83790406 83790427 IRF1 JASPAR yes 49404236
chr16 83790409 83790419 MEF2A JASPAR yes 49404237
chr16 83790410 83790424 SPI1 JASPAR yes 49404238
SNP sites on vista23217[chr16:83790064-83790448]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 83790108 rs142547486 G A no 4601994
chr16 83790129 rs552156523 C A no 4601995
chr16 83790171 rs71404110 A T
CDX1 CDX2 HOXA10 HOXA13 HOXB13 HOXD13
4601996
chr16 83790186 rs8047962 C T no 4601997
chr16 83790218 rs145950748 A C no 4601998
chr16 83790236 rs112590349 A G
H1TF2 NFE SRF
4601999
chr16 83790240 rs8048289 G A no 4602000
chr16 83790304 rs573214576 A C,G
RARA
4602001
chr16 83790321 rs74789010 T C no 4602002
chr16 83790325 rs8048455 G A no 4602003
chr16 83790401 rs61093215 C A
IRF1
4602004
chr16 83790414 rs7189100 A T
IRF1 MEF2A SPI1
4602005
chr16 83790432 rs146879933 C G no 4602006
chr16 83790448 rs140696694 A T no 4602007
Genes possibly regulated by vista23217[chr16:83790064-83790448]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 83841448 83853342 + HSBP1 ENSG00000230989.2 83841448 0.74 1.0 15107 49000
Expression level of Genes
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miRNAs possibly regulated by vista23217[chr16:83790064-83790448]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results