EnhancerDB
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  3. vista23228[chr16:84130238-84130438]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23228[chr16:84130238-84130438]
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Tissue distribution of vista23228
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Transcription factor that possibly regulate vista23228[chr16:84130238-84130438]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 84130231 84130551 FOXA1 UCSC Txn Factor no Conserved 108211654
chr16 84130234 84130541 FOXA2 UCSC Txn Factor no Conserved 108211656
chr16 84130251 84130269 IRF2 JASPAR yes 11960608
chr16 84130251 84130269 IRF2 JASPAR yes 49404668
chr16 84130253 84130268 SOX21 JASPAR yes 11960609
chr16 84130253 84130268 SOX21 JASPAR yes 49404669
chr16 84130253 84130269 SOX4 JASPAR yes 11960610
chr16 84130253 84130269 SOX4 JASPAR yes 49404670
chr16 84130256 84130268 IRF1 JASPAR yes 11960611
chr16 84130256 84130268 IRF1 JASPAR yes 49404671
chr16 84130257 84130261 NFE TRANSFAC yes 11960612
chr16 84130257 84130261 NFE TRANSFAC yes 49404672
chr16 84130261 84130265 YY1 TRANSFAC yes 11960613
chr16 84130261 84130265 YY1 TRANSFAC yes 49404673
chr16 84130297 84130304 NKX3-1 JASPAR yes 11960614
chr16 84130297 84130304 NKX3-1 JASPAR yes 49404674
chr16 84130311 84130319 FOXO3 JASPAR yes 11960615
chr16 84130311 84130319 FOXO3 JASPAR yes 49404675
chr16 84130314 84130320 HiNF-A TRANSFAC yes 11960616
chr16 84130314 84130320 HiNF-A TRANSFAC yes 49404676
chr16 84130328 84130333 ATF1 TRANSFAC yes 11960617
chr16 84130328 84130333 ATF1 TRANSFAC yes 49404677
chr16 84130334 84130345 STAT1 JASPAR yes 11960618
chr16 84130334 84130345 STAT1 JASPAR yes 49404678
chr16 84130339 84130347 FOXC1 JASPAR yes 11960619
chr16 84130339 84130347 FOXC1 JASPAR yes 49404679
chr16 84130340 84130351 FOXA1 JASPAR yes 11960620
chr16 84130340 84130351 FOXA1 JASPAR yes 49404680
chr16 84130340 84130355 FOXA1 JASPAR yes 11960621
chr16 84130340 84130355 FOXA1 JASPAR yes 49404681
chr16 84130341 84130348 NKX3-1 JASPAR yes 11960622
chr16 84130341 84130348 NKX3-1 JASPAR yes 49404682
chr16 84130341 84130352 FOXB1 JASPAR yes 11960623
chr16 84130341 84130352 FOXC1 JASPAR yes 11960624
chr16 84130341 84130352 FOXB1 JASPAR yes 49404683
chr16 84130341 84130352 FOXC1 JASPAR yes 49404684
chr16 84130341 84130353 FOXC2 JASPAR yes 11960625
chr16 84130341 84130353 FOXC2 JASPAR yes 49404685
chr16 84130345 84130360 FOXA1 JASPAR yes 11960626
chr16 84130345 84130360 FOXA1 JASPAR yes 49404686
chr16 84130348 84130359 FOXB1 JASPAR yes 11960627
chr16 84130348 84130359 FOXC1 JASPAR yes 11960628
chr16 84130348 84130359 FOXB1 JASPAR yes 49404687
chr16 84130348 84130359 FOXC1 JASPAR yes 49404688
chr16 84130349 84130353 YY1 TRANSFAC yes 11960629
chr16 84130349 84130353 YY1 TRANSFAC yes 49404689
chr16 84130349 84130360 FOXA1 JASPAR yes 11960630
chr16 84130349 84130360 FOXA1 JASPAR yes 49404690
chr16 84130376 84130386 ALX3 JASPAR yes 11960631
chr16 84130376 84130386 MIXL1 JASPAR yes 11960632
chr16 84130376 84130386 ALX3 JASPAR yes 49404691
chr16 84130376 84130386 MIXL1 JASPAR yes 49404692
chr16 84130377 84130385 ISX JASPAR yes 11960633
chr16 84130377 84130385 LHX9 JASPAR yes 11960634
chr16 84130377 84130385 LMX1B JASPAR yes 11960635
chr16 84130377 84130385 PRRX1 JASPAR yes 11960636
chr16 84130377 84130385 RAX2 JASPAR yes 11960637
chr16 84130377 84130385 SHOX JASPAR yes 11960638
chr16 84130377 84130385 UNCX JASPAR yes 11960639
chr16 84130377 84130385 ISX JASPAR yes 49404693
chr16 84130377 84130385 LHX9 JASPAR yes 49404694
chr16 84130377 84130385 LMX1B JASPAR yes 49404695
chr16 84130377 84130385 PRRX1 JASPAR yes 49404696
chr16 84130377 84130385 RAX2 JASPAR yes 49404697
chr16 84130377 84130385 SHOX JASPAR yes 49404698
chr16 84130377 84130385 UNCX JASPAR yes 49404699
chr16 84130380 84130385 MYB TRANSFAC yes 11960640
chr16 84130380 84130385 MYB TRANSFAC yes 49404700
chr16 84130387 84130394 SPIB JASPAR yes 11960641
chr16 84130387 84130394 SPIB JASPAR yes 49404701
chr16 84130408 84130419 FOXA1 JASPAR yes 11960642
chr16 84130408 84130419 FOXA1 JASPAR yes 49404702
chr16 84130408 84130423 FOXA1 JASPAR yes 11960643
chr16 84130408 84130423 FOXA1 JASPAR yes 49404703
chr16 84130409 84130420 FOXB1 JASPAR yes 11960644
chr16 84130409 84130420 FOXC1 JASPAR yes 11960645
chr16 84130409 84130420 FOXB1 JASPAR yes 49404704
chr16 84130409 84130420 FOXC1 JASPAR yes 49404705
chr16 84130409 84130421 FOXC2 JASPAR yes 11960646
chr16 84130409 84130421 FOXC2 JASPAR yes 49404706
chr16 84130433 84130442 SNAI2 JASPAR yes 11960647
chr16 84130433 84130442 SNAI2 JASPAR yes 49404707
chr16 84130433 84130443 ID4 JASPAR yes 11960648
chr16 84130433 84130443 TCF3 JASPAR yes 11960649
chr16 84130433 84130443 TCF4 JASPAR yes 11960650
chr16 84130433 84130443 ID4 JASPAR yes 49404708
chr16 84130433 84130443 TCF3 JASPAR yes 49404709
chr16 84130433 84130443 TCF4 JASPAR yes 49404710
SNP sites on vista23228[chr16:84130238-84130438]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 84130252 rs138455393 A C
FOXA1 FOXA2 IRF2
4604686
chr16 84130286 rs8049209 C A,G
FOXA1 FOXA2
4604687
chr16 84130319 rs143996315 A C
FOXA1 FOXA2 FOXO3 HiNF-A
4604688
chr16 84130379 rs11863841 T G
ALX3 FOXA1 FOXA2 ISX LHX9 LMX1B MIXL1 PRRX1 RAX2 SHOX UNCX
4604689
Genes possibly regulated by vista23228[chr16:84130238-84130438]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 84043272 84076241 - SLC38A8 ENSG00000166558.6 84076241 0.97 0.97 15112 46003
chr16 84087368 84150511 - MBTPS1 ENSG00000140943.12 84150511 0.62 1.0 15113 79927
chr16 84155886 84178797 - HSDL1 ENSG00000103160.7 84178797 0.69 0.99 15114 51641
chr16 84178865 84212373 + DNAAF1 ENSG00000154099.13 84178865 0.89 1.0 15115 51573
chr16 84211458 84220669 - TAF1C ENSG00000103168.12 84220669 0.69 1.0 15116 9769
chr16 84224744 84230774 + ADAD2 ENSG00000140955.6 84224744 0.96 0.99 15117 5694
Expression level of Genes
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miRNAs possibly regulated by vista23228[chr16:84130238-84130438]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results