EnhancerDB
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  3. vista23242[chr16:84545075-84545257]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23242[chr16:84545075-84545257]
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Tissue distribution of vista23242
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Transcription factor that possibly regulate vista23242[chr16:84545075-84545257]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 84544909 84545344 CTCF UCSC Txn Factor no Conserved 108211993
chr16 84544988 84545272 SMC3 UCSC Txn Factor no Conserved 108212010
chr16 84545008 84545246 RUNX3 UCSC Txn Factor no Conserved 108212017
chr16 84545015 84545251 RAD21 UCSC Txn Factor no Conserved 108212019
chr16 84545074 84545079 ETS2 TRANSFAC yes 11975715
chr16 84545074 84545079 ETS2 TRANSFAC yes 49405249
chr16 84545076 84545084 EHF JASPAR yes 11975716
chr16 84545076 84545084 EHF JASPAR yes 49405250
chr16 84545078 84545083 ETS2 TRANSFAC yes 11975717
chr16 84545078 84545083 ETS2 TRANSFAC yes 49405251
chr16 84545096 84545100 ESR1 TRANSFAC yes 11975718
chr16 84545096 84545100 ESR1 TRANSFAC yes 49405252
chr16 84545104 84545108 H1TF2 TRANSFAC yes 11975719
chr16 84545104 84545108 NFE TRANSFAC yes 11975720
chr16 84545104 84545108 SRF TRANSFAC yes 11975721
chr16 84545104 84545108 H1TF2 TRANSFAC yes 49405253
chr16 84545104 84545108 NFE TRANSFAC yes 49405254
chr16 84545104 84545108 SRF TRANSFAC yes 49405255
chr16 84545110 84545114 NFE TRANSFAC yes 11975722
chr16 84545110 84545114 NFE TRANSFAC yes 49405256
chr16 84545118 84545137 CTCF JASPAR yes 11975723
chr16 84545118 84545137 CTCF JASPAR yes 49405257
chr16 84545123 84545133 FIGLA JASPAR yes 11975724
chr16 84545123 84545133 FIGLA JASPAR yes 49405258
chr16 84545132 84545147 ZBTB33 JASPAR yes 11975725
chr16 84545132 84545147 ZBTB33 JASPAR yes 49405259
chr16 84545141 84545150 RUNX2 JASPAR yes 11975726
chr16 84545141 84545150 RUNX2 JASPAR yes 49405260
chr16 84545141 84545151 RUNX3 JASPAR yes 11975727
chr16 84545141 84545151 RUNX3 JASPAR yes 49405261
chr16 84545149 84545155 HiNF-A TRANSFAC yes 11975728
chr16 84545149 84545155 HiNF-A TRANSFAC yes 49405262
chr16 84545149 84545159 MAX JASPAR yes 11975729
chr16 84545149 84545159 MAX JASPAR yes 49405263
chr16 84545150 84545160 NEUROG2 JASPAR yes 11975730
chr16 84545150 84545160 NEUROG2 JASPAR yes 49405264
chr16 84545179 84545191 PROX1 JASPAR yes 11975731
chr16 84545179 84545191 PROX1 JASPAR yes 49405265
chr16 84545200 84545208 FOXL1 JASPAR yes 11975732
chr16 84545200 84545208 FOXL1 JASPAR yes 49405266
chr16 84545243 84545254 GCM1 JASPAR yes 11975733
chr16 84545243 84545254 GCM1 JASPAR yes 49405267
chr16 84545244 84545254 GCM2 JASPAR yes 11975734
chr16 84545244 84545254 GCM2 JASPAR yes 49405268
SNP sites on vista23242[chr16:84545075-84545257]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 84545126 rs193700 C G
CTCF FIGLA RAD21 RUNX3 SMC3
4608266
chr16 84545158 rs8055743 G T
CTCF MAX NEUROG2 RAD21 RUNX3 SMC3
4608267
chr16 84545164 rs1968833 C G
CTCF RAD21 RUNX3 SMC3
4608268
chr16 84545172 rs544536705 T C
CTCF RAD21 RUNX3 SMC3
4608269
chr16 84545229 rs370185258 T C
CTCF RAD21 RUNX3 SMC3
4608270
chr16 84545238 rs9925081 C T
CTCF RAD21 RUNX3 SMC3
4608271
chr16 84545253 rs141412389 C G,T
CTCF GCM1 GCM2 SMC3
4608272
Genes possibly regulated by vista23242[chr16:84545075-84545257]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 84511681 84587639 - TLDC1 ENSG00000140950.11 84587639 0.89 1.0 15121 57618
Expression level of Genes
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miRNAs possibly regulated by vista23242[chr16:84545075-84545257]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results