EnhancerDB
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  3. vista23258[chr16:84704578-84704887]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23258[chr16:84704578-84704887]
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Tissue distribution of vista23258
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Transcription factor that possibly regulate vista23258[chr16:84704578-84704887]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 84704568 84704579 GCM1 JASPAR yes 11988982
chr16 84704568 84704579 GCM1 JASPAR yes 49405927
chr16 84704569 84704579 GCM2 JASPAR yes 11988983
chr16 84704569 84704579 GCM2 JASPAR yes 49405928
chr16 84704587 84704606 CTCF JASPAR yes 11988984
chr16 84704587 84704606 CTCF JASPAR yes 49405929
chr16 84704590 84704605 SCRT1 JASPAR yes 11988985
chr16 84704590 84704605 SCRT1 JASPAR yes 49405930
chr16 84704592 84704605 SCRT2 JASPAR yes 11988986
chr16 84704592 84704605 SCRT2 JASPAR yes 49405931
chr16 84704594 84704600 PTF TRANSFAC yes 11988987
chr16 84704594 84704600 PTF TRANSFAC yes 49405932
chr16 84704605 84704623 ESR1 JASPAR yes 11988988
chr16 84704605 84704623 ESR1 JASPAR yes 49405933
chr16 84704631 84704640 THAP1 JASPAR yes 11988989
chr16 84704631 84704640 THAP1 JASPAR yes 49405934
chr16 84704653 84704662 VENTX JASPAR yes 11988990
chr16 84704653 84704662 VENTX JASPAR yes 49405935
chr16 84704668 84704679 E2F4 JASPAR yes 11988991
chr16 84704668 84704679 E2F4 JASPAR yes 49405936
chr16 84704669 84704676 E2F1 TRANSFAC yes 11988992
chr16 84704669 84704676 E2F1 TRANSFAC yes 49405937
chr16 84704669 84704677 E2F1 JASPAR yes 11988993
chr16 84704669 84704677 E2F1 JASPAR yes 49405938
chr16 84704686 84704704 NR3C1 JASPAR yes 11988994
chr16 84704686 84704704 NR3C1 JASPAR yes 49405939
chr16 84704696 84704711 HNF4A JASPAR yes 11988995
chr16 84704696 84704711 HNF4A JASPAR yes 49405940
chr16 84704697 84704711 NR2F1 JASPAR yes 11988996
chr16 84704697 84704711 NR2F1 JASPAR yes 49405941
chr16 84704697 84704712 HNF4G JASPAR yes 11988997
chr16 84704697 84704712 HNF4G JASPAR yes 49405942
chr16 84704697 84704714 RARA JASPAR yes 11988998
chr16 84704697 84704714 RARA JASPAR yes 49405943
chr16 84704744 84704757 SMAD2 JASPAR yes 11988999
chr16 84704744 84704757 SMAD2 JASPAR yes 49405944
chr16 84704756 84704777 REST JASPAR yes 11989000
chr16 84704756 84704777 REST JASPAR yes 49405945
chr16 84704773 84704778 TFAP2A TRANSFAC yes 11989001
chr16 84704773 84704778 TFAP2A TRANSFAC yes 49405946
chr16 84704773 84704779 MZF1 JASPAR yes 11989002
chr16 84704773 84704779 MZF1 JASPAR yes 49405947
chr16 84704790 84704796 SOX10 JASPAR yes 11989003
chr16 84704790 84704796 SOX10 JASPAR yes 49405948
chr16 84704806 84704821 TFAP2C JASPAR yes 11989004
chr16 84704806 84704821 TFAP2C JASPAR yes 49405949
chr16 84704807 84704813 NFE2 TRANSFAC yes 11989005
chr16 84704807 84704813 NFE2 TRANSFAC yes 49405950
chr16 84704808 84704820 TFAP2A JASPAR yes 11989006
chr16 84704808 84704820 TFAP2B JASPAR yes 11989007
chr16 84704808 84704820 TFAP2C JASPAR yes 11989008
chr16 84704808 84704820 TFAP2A JASPAR yes 49405951
chr16 84704808 84704820 TFAP2B JASPAR yes 49405952
chr16 84704808 84704820 TFAP2C JASPAR yes 49405953
chr16 84704808 84704821 TFAP2A JASPAR yes 11989009
chr16 84704808 84704821 TFAP2B JASPAR yes 11989010
chr16 84704808 84704821 TFAP2C JASPAR yes 11989011
chr16 84704808 84704821 TFAP2A JASPAR yes 49405954
chr16 84704808 84704821 TFAP2B JASPAR yes 49405955
chr16 84704808 84704821 TFAP2C JASPAR yes 49405956
chr16 84704808 84704823 TFAP2A JASPAR yes 11989012
chr16 84704808 84704823 TFAP2A JASPAR yes 49405957
chr16 84704809 84704820 EBF1 JASPAR yes 11989013
chr16 84704809 84704820 EBF1 JASPAR yes 49405958
chr16 84704809 84704822 TFAP2A JASPAR yes 11989014
chr16 84704809 84704822 TFAP2B JASPAR yes 11989015
chr16 84704809 84704822 TFAP2C JASPAR yes 11989016
chr16 84704809 84704822 TFAP2A JASPAR yes 49405959
chr16 84704809 84704822 TFAP2B JASPAR yes 49405960
chr16 84704809 84704822 TFAP2C JASPAR yes 49405961
chr16 84704810 84704822 TFAP2B JASPAR yes 11989017
chr16 84704810 84704822 TFAP2C JASPAR yes 11989018
chr16 84704810 84704822 TFAP2B JASPAR yes 49405962
chr16 84704810 84704822 TFAP2C JASPAR yes 49405963
chr16 84704811 84704822 EBF1 JASPAR yes 11989019
chr16 84704811 84704822 EBF1 JASPAR yes 49405964
chr16 84704817 84704821 LFA1 TRANSFAC yes 11989020
chr16 84704817 84704821 LFA1 TRANSFAC yes 49405965
chr16 84704835 84704853 RARA JASPAR yes 11989021
chr16 84704835 84704853 RARA JASPAR yes 49405966
chr16 84704837 84704851 RORA JASPAR yes 11989022
chr16 84704837 84704851 RORA JASPAR yes 49405967
chr16 84704841 84704854 NR2F1 JASPAR yes 11989023
chr16 84704841 84704854 NR2F1 JASPAR yes 49405968
chr16 84704845 84704849 ESR1 TRANSFAC yes 11989024
chr16 84704845 84704849 ESR1 TRANSFAC yes 49405969
chr16 84704845 84704856 USF1 JASPAR yes 11989025
chr16 84704845 84704856 USF1 JASPAR yes 49405970
chr16 84704848 84704857 ZEB1 JASPAR yes 11989026
chr16 84704848 84704857 ZEB1 JASPAR yes 49405971
chr16 84704850 84704855 SP1 TRANSFAC yes 11989027
chr16 84704850 84704855 SP1 TRANSFAC yes 49405972
chr16 84704852 84704857 TFAP2A TRANSFAC yes 11989028
chr16 84704852 84704857 TFAP2A TRANSFAC yes 49405973
chr16 84704852 84704858 MZF1 JASPAR yes 11989029
chr16 84704852 84704858 MZF1 JASPAR yes 49405974
chr16 84704855 84704860 GATA2 JASPAR yes 11989030
chr16 84704855 84704860 GATA2 JASPAR yes 49405975
chr16 84704868 84704881 HSF1 JASPAR yes 11989031
chr16 84704868 84704881 HSF1 JASPAR yes 49405976
chr16 84704876 84704890 ZIC1 JASPAR yes 11989032
chr16 84704876 84704890 ZIC1 JASPAR yes 49405977
chr16 84704876 84704891 ZIC3 JASPAR yes 11989033
chr16 84704876 84704891 ZIC4 JASPAR yes 11989034
chr16 84704876 84704891 ZIC3 JASPAR yes 49405978
chr16 84704876 84704891 ZIC4 JASPAR yes 49405979
SNP sites on vista23258[chr16:84704578-84704887]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 84704588 rs370099938 C G,T
CTCF
4611207
chr16 84704650 rs143249435 C G no 4611208
chr16 84704669 rs16974398 C T
E2F1 E2F4
4611209
chr16 84704728 rs372022002 C G,T no 4611210
chr16 84704747 rs114778013 G A
SMAD2
4611211
chr16 84704760 rs552007974 G A,T
REST
4611212
chr16 84704807 rs147530256 C T
NFE2 TFAP2C
4611213
chr16 84704860 rs539828653 A G,T
GATA2
4611214
chr16 84704884 rs536309956 C T
ZIC1 ZIC3 ZIC4
4611215
Genes possibly regulated by vista23258[chr16:84704578-84704887]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 84599200 84651683 - COTL1 ENSG00000103187.6 84651683 0.77 1.0 15122 47105
chr16 84682131 84701292 + KLHL36 ENSG00000135686.8 84682131 0.59 1.0 15123 77553
chr16 84733584 84813528 + USP10 ENSG00000103194.11 84733584 0.76 1.0 15124 71303
Expression level of Genes
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miRNAs possibly regulated by vista23258[chr16:84704578-84704887]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results