EnhancerDB
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  3. vista23287[chr16:85268297-85268637]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23287[chr16:85268297-85268637]
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Tissue distribution of vista23287
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Transcription factor that possibly regulate vista23287[chr16:85268297-85268637]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85268248 85268490 EGR1 UCSC Txn Factor no Conserved 108213573
chr16 85268286 85268303 RARA JASPAR yes 12036441
chr16 85268286 85268303 RARA JASPAR yes 49407316
chr16 85268292 85268307 SOX21 JASPAR yes 12036442
chr16 85268292 85268307 SOX21 JASPAR yes 49407317
chr16 85268292 85268309 RXRA JASPAR yes 12036443
chr16 85268292 85268309 RXRA JASPAR yes 49407318
chr16 85268295 85268306 ESRRA JASPAR yes 12036444
chr16 85268295 85268306 ESRRA JASPAR yes 49407319
chr16 85268299 85268312 NR2F1 JASPAR yes 12036445
chr16 85268299 85268312 NR2F1 JASPAR yes 49407320
chr16 85268303 85268320 RARA JASPAR yes 12036446
chr16 85268303 85268320 RARA JASPAR yes 49407321
chr16 85268342 85268351 SP1 TRANSFAC yes 12036447
chr16 85268342 85268351 SP1 TRANSFAC yes 49407322
chr16 85268343 85268349 SP1 TRANSFAC yes 12036448
chr16 85268343 85268349 SP1 TRANSFAC yes 49407323
chr16 85268343 85268353 SP1 JASPAR yes 12036449
chr16 85268343 85268353 SP1 JASPAR yes 49407324
chr16 85268344 85268351 SP1 TRANSFAC yes 12036450
chr16 85268344 85268351 SP1 TRANSFAC yes 49407325
chr16 85268345 85268350 SP1 TRANSFAC yes 12036451
chr16 85268345 85268350 SP1 TRANSFAC yes 49407326
chr16 85268345 85268351 SP1 TRANSFAC yes 12036452
chr16 85268345 85268351 SP1 TRANSFAC yes 49407327
chr16 85268354 85268364 SP1 JASPAR yes 12036453
chr16 85268354 85268364 SP1 JASPAR yes 49407328
chr16 85268356 85268361 SP1 TRANSFAC yes 12036454
chr16 85268356 85268361 SP1 TRANSFAC yes 49407329
chr16 85268356 85268362 SP1 TRANSFAC yes 12036455
chr16 85268356 85268362 SP1 TRANSFAC yes 49407330
chr16 85268356 85268363 SP1 TRANSFAC yes 12036456
chr16 85268356 85268363 SP1 TRANSFAC yes 49407331
chr16 85268357 85268365 WT1 TRANSFAC yes 12036457
chr16 85268357 85268365 WT1 TRANSFAC yes 49407332
chr16 85268365 85268380 ZIC3 JASPAR yes 12036458
chr16 85268365 85268380 ZIC3 JASPAR yes 49407333
chr16 85268366 85268380 ZIC1 JASPAR yes 12036459
chr16 85268366 85268380 ZIC1 JASPAR yes 49407334
chr16 85268393 85268413 RREB1 JASPAR yes 12036460
chr16 85268393 85268413 RREB1 JASPAR yes 49407335
chr16 85268397 85268417 RREB1 JASPAR yes 12036461
chr16 85268397 85268417 RREB1 JASPAR yes 49407336
chr16 85268401 85268406 SP1 TRANSFAC yes 12036462
chr16 85268401 85268406 SP1 TRANSFAC yes 49407337
chr16 85268402 85268422 RREB1 JASPAR yes 12036463
chr16 85268402 85268422 RREB1 JASPAR yes 49407338
chr16 85268405 85268410 SP1 TRANSFAC yes 12036464
chr16 85268405 85268410 SP1 TRANSFAC yes 49407339
chr16 85268415 85268420 SP1 TRANSFAC yes 12036465
chr16 85268415 85268420 SP1 TRANSFAC yes 49407340
chr16 85268419 85268424 SP1 TRANSFAC yes 12036466
chr16 85268419 85268424 SP1 TRANSFAC yes 49407341
chr16 85268448 85268460 NHLH1 JASPAR yes 12036467
chr16 85268448 85268460 NHLH1 JASPAR yes 49407342
chr16 85268457 85268467 GSC2 JASPAR yes 12036468
chr16 85268457 85268467 GSC JASPAR yes 12036469
chr16 85268457 85268467 GSC2 JASPAR yes 49407343
chr16 85268457 85268467 GSC JASPAR yes 49407344
chr16 85268458 85268466 OTX1 JASPAR yes 12036470
chr16 85268458 85268466 OTX1 JASPAR yes 49407345
chr16 85268458 85268467 PITX3 JASPAR yes 12036471
chr16 85268458 85268467 PITX3 JASPAR yes 49407346
chr16 85268468 85268478 NEUROG2 JASPAR yes 12036472
chr16 85268468 85268478 NEUROG2 JASPAR yes 49407347
chr16 85268496 85268502 SOX10 JASPAR yes 12036473
chr16 85268496 85268502 SOX10 JASPAR yes 49407348
chr16 85268500 85268505 SP1 TRANSFAC yes 12036474
chr16 85268500 85268505 SP1 TRANSFAC yes 49407349
chr16 85268516 85268524 GATA3 JASPAR yes 12036475
chr16 85268516 85268524 GATA3 JASPAR yes 49407350
chr16 85268530 85268545 NR2C2 JASPAR yes 12036476
chr16 85268530 85268545 NR2C2 JASPAR yes 49407351
chr16 85268531 85268541 SP1 JASPAR yes 12036477
chr16 85268531 85268541 SP1 JASPAR yes 49407352
chr16 85268532 85268540 SP1 TRANSFAC yes 12036478
chr16 85268532 85268540 SP1 TRANSFAC yes 49407353
chr16 85268533 85268538 SP1 TRANSFAC yes 12036479
chr16 85268533 85268538 SP1 TRANSFAC yes 49407354
chr16 85268534 85268539 SP1 TRANSFAC yes 12036480
chr16 85268534 85268539 SP1 TRANSFAC yes 49407355
chr16 85268534 85268540 SP1 TRANSFAC yes 12036481
chr16 85268534 85268540 SP1 TRANSFAC yes 49407356
chr16 85268534 85268546 ZBTB7B JASPAR yes 12036482
chr16 85268534 85268546 ZBTB7C JASPAR yes 12036483
chr16 85268534 85268546 ZBTB7B JASPAR yes 49407357
chr16 85268534 85268546 ZBTB7C JASPAR yes 49407358
chr16 85268536 85268549 NFKB1 JASPAR yes 12036484
chr16 85268536 85268549 NFKB1 JASPAR yes 49407359
chr16 85268536 85268555 RFX2 JASPAR yes 12036485
chr16 85268536 85268555 RFX2 JASPAR yes 49407360
chr16 85268543 85268555 TFAP2A JASPAR yes 12036486
chr16 85268543 85268555 TFAP2A JASPAR yes 49407361
chr16 85268544 85268553 TFAP2A JASPAR yes 12036487
chr16 85268544 85268553 TFAP2A JASPAR yes 49407362
chr16 85268552 85268558 SP1 TRANSFAC yes 12036488
chr16 85268552 85268558 SP1 TRANSFAC yes 49407363
chr16 85268563 85268574 SPDEF JASPAR yes 12036489
chr16 85268563 85268574 SPDEF JASPAR yes 49407364
chr16 85268567 85268572 GATA2 JASPAR yes 12036490
chr16 85268567 85268572 GATA2 JASPAR yes 49407365
chr16 85268585 85268589 H1TF2 TRANSFAC yes 12036491
chr16 85268585 85268589 NFE TRANSFAC yes 12036492
chr16 85268585 85268589 SRF TRANSFAC yes 12036493
chr16 85268585 85268589 H1TF2 TRANSFAC yes 49407366
chr16 85268585 85268589 NFE TRANSFAC yes 49407367
chr16 85268585 85268589 SRF TRANSFAC yes 49407368
chr16 85268597 85268616 CTCF JASPAR yes 12036494
chr16 85268597 85268616 CTCF JASPAR yes 49407369
chr16 85268600 85268610 MZF1 JASPAR yes 12036495
chr16 85268600 85268610 MZF1 JASPAR yes 49407370
chr16 85268601 85268620 REST JASPAR yes 12036496
chr16 85268601 85268620 REST JASPAR yes 49407371
chr16 85268603 85268609 SP1 TRANSFAC yes 12036497
chr16 85268603 85268609 SP1 TRANSFAC yes 49407372
chr16 85268622 85268628 MZF1 JASPAR yes 12036498
chr16 85268622 85268628 MZF1 JASPAR yes 49407373
SNP sites on vista23287[chr16:85268297-85268637]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85268298 rs112970434 T C
EGR1 ESRRA RARA RXRA SOX21
4619005
chr16 85268409 rs550711912 G T
EGR1 RREB1 SP1
4619006
chr16 85268444 rs570806018 A C
EGR1
4619007
chr16 85268445 rs539575811 T A
EGR1
4619008
chr16 85268465 rs190619018 A G
EGR1 GSC GSC2 OTX1 PITX3
4619009
chr16 85268511 rs555884445 C T no 4619010
chr16 85268520 rs181926639 T C
GATA3
4619011
chr16 85268536 rs186118782 G C
NFKB1 NR2C2 RFX2 SP1 ZBTB7B ZBTB7C
4619012
Genes possibly regulated by vista23287[chr16:85268297-85268637]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85204882 85218969 + CTC-786C10.1 ENSG00000262601.1 85204882 0.8 1.0 15129 36585
Expression level of Genes
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miRNAs possibly regulated by vista23287[chr16:85268297-85268637]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results