EnhancerDB
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  3. vista23298[chr16:85398689-85398993]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23298[chr16:85398689-85398993]
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Tissue distribution of vista23298
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Transcription factor that possibly regulate vista23298[chr16:85398689-85398993]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85398688 85398701 SMAD2 JASPAR yes 12052469
chr16 85398688 85398701 SMAD2 JASPAR yes 49407914
chr16 85398692 85398705 ZBTB18 JASPAR yes 12052470
chr16 85398692 85398705 ZBTB18 JASPAR yes 49407915
chr16 85398693 85398705 NHLH1 JASPAR yes 12052471
chr16 85398693 85398705 PKNOX1 JASPAR yes 12052472
chr16 85398693 85398705 PKNOX2 JASPAR yes 12052473
chr16 85398693 85398705 NHLH1 JASPAR yes 49407916
chr16 85398693 85398705 PKNOX1 JASPAR yes 49407917
chr16 85398693 85398705 PKNOX2 JASPAR yes 49407918
chr16 85398694 85398704 NHLH1 JASPAR yes 12052474
chr16 85398694 85398704 NHLH1 JASPAR yes 49407919
chr16 85398704 85398715 E2F6 JASPAR yes 12052475
chr16 85398704 85398715 E2F6 JASPAR yes 49407920
chr16 85398705 85398710 SP1 TRANSFAC yes 12052476
chr16 85398705 85398710 SP1 TRANSFAC yes 49407921
chr16 85398706 85398719 NFKB1 JASPAR yes 12052477
chr16 85398706 85398719 NFKB1 JASPAR yes 49407922
chr16 85398707 85398718 NFKB1 JASPAR yes 12052478
chr16 85398707 85398718 NFKB1 JASPAR yes 49407923
chr16 85398708 85398713 ETS2 TRANSFAC yes 12052479
chr16 85398708 85398713 ETS2 TRANSFAC yes 49407924
chr16 85398708 85398718 NFKB1 JASPAR yes 12052480
chr16 85398708 85398718 RELA JASPAR yes 12052481
chr16 85398708 85398718 NFKB1 JASPAR yes 49407925
chr16 85398708 85398718 RELA JASPAR yes 49407926
chr16 85398708 85398719 NFKB1 JASPAR yes 12052482
chr16 85398708 85398719 NFKB1 JASPAR yes 49407927
chr16 85398739 85398749 SP1 JASPAR yes 12052483
chr16 85398739 85398749 SP1 JASPAR yes 49407928
chr16 85398740 85398761 ZNF263 JASPAR yes 12052484
chr16 85398740 85398761 ZNF263 JASPAR yes 49407929
chr16 85398767 85398779 INSM1 JASPAR yes 12052485
chr16 85398767 85398779 INSM1 JASPAR yes 49407930
chr16 85398778 85398788 SP1 JASPAR yes 12052486
chr16 85398778 85398788 SP1 JASPAR yes 49407931
chr16 85398808 85398816 MGA JASPAR yes 12052487
chr16 85398808 85398816 TBX15 JASPAR yes 12052488
chr16 85398808 85398816 TBX1 JASPAR yes 12052489
chr16 85398808 85398816 TBX4 JASPAR yes 12052490
chr16 85398808 85398816 TBX5 JASPAR yes 12052491
chr16 85398808 85398816 MGA JASPAR yes 49407932
chr16 85398808 85398816 TBX15 JASPAR yes 49407933
chr16 85398808 85398816 TBX1 JASPAR yes 49407934
chr16 85398808 85398816 TBX4 JASPAR yes 49407935
chr16 85398808 85398816 TBX5 JASPAR yes 49407936
chr16 85398813 85398820 SP1 TRANSFAC yes 12052492
chr16 85398813 85398820 SP1 TRANSFAC yes 49407937
chr16 85398814 85398819 SP1 TRANSFAC yes 12052493
chr16 85398814 85398819 SP1 TRANSFAC yes 49407938
chr16 85398814 85398820 SP1 TRANSFAC yes 12052494
chr16 85398814 85398820 SP1 TRANSFAC yes 49407939
chr16 85398814 85398821 SP1 TRANSFAC yes 12052495
chr16 85398814 85398821 SP1 TRANSFAC yes 49407940
chr16 85398824 85398829 GATA2 JASPAR yes 12052496
chr16 85398824 85398829 GATA2 JASPAR yes 49407941
chr16 85398845 85398863 ESR2 JASPAR yes 12052497
chr16 85398845 85398863 ESR2 JASPAR yes 49407942
chr16 85398846 85398864 ESR1 JASPAR yes 12052498
chr16 85398846 85398864 ESR1 JASPAR yes 49407943
chr16 85398847 85398867 ESR1 JASPAR yes 12052499
chr16 85398847 85398867 ESR1 JASPAR yes 49407944
chr16 85398851 85398863 PROX1 JASPAR yes 12052500
chr16 85398851 85398863 PROX1 JASPAR yes 49407945
chr16 85398864 85398883 REST JASPAR yes 12052501
chr16 85398864 85398883 REST JASPAR yes 49407946
chr16 85398869 85398873 NFE TRANSFAC yes 12052502
chr16 85398869 85398873 NFE TRANSFAC yes 49407947
chr16 85398874 85398889 STAT1 JASPAR yes 12052503
chr16 85398874 85398889 STAT1 JASPAR yes 49407948
chr16 85398876 85398887 STAT1 JASPAR yes 12052504
chr16 85398876 85398887 STAT3 JASPAR yes 12052505
chr16 85398876 85398887 STAT1 JASPAR yes 49407949
chr16 85398876 85398887 STAT3 JASPAR yes 49407950
chr16 85398904 85398909 SP1 TRANSFAC yes 12052506
chr16 85398904 85398909 SP1 TRANSFAC yes 49407951
chr16 85398906 85398915 TFAP2A JASPAR yes 12052507
chr16 85398906 85398915 TFAP2A JASPAR yes 49407952
chr16 85398916 85398929 JUN JASPAR yes 12052508
chr16 85398916 85398929 JUN JASPAR yes 49407953
chr16 85398933 85398947 MTF1 JASPAR yes 12052509
chr16 85398933 85398947 MTF1 JASPAR yes 49407954
chr16 85398942 85398952 NKX2-3 JASPAR yes 12052510
chr16 85398942 85398952 NKX2-3 JASPAR yes 49407955
chr16 85398943 85398952 NKX2-8 JASPAR yes 12052511
chr16 85398943 85398952 NKX2-8 JASPAR yes 49407956
chr16 85398965 85398986 ZNF263 JASPAR yes 12052512
chr16 85398965 85398986 ZNF263 JASPAR yes 49407957
chr16 85398972 85398989 RXRA JASPAR yes 12052513
chr16 85398972 85398989 RXRA JASPAR yes 49407958
chr16 85398976 85398984 SP1 TRANSFAC yes 12052514
chr16 85398976 85398984 SP1 TRANSFAC yes 49407959
chr16 85398976 85398986 SP1 JASPAR yes 12052515
chr16 85398976 85398986 SP1 JASPAR yes 49407960
chr16 85398981 85399002 ZNF263 JASPAR yes 12052516
chr16 85398981 85399002 ZNF263 JASPAR yes 49407961
chr16 85398984 85398999 PRDM1 JASPAR yes 12052517
chr16 85398984 85398999 PRDM1 JASPAR yes 49407962
SNP sites on vista23298[chr16:85398689-85398993]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85398782 rs557637787 G T
SP1
4621613
chr16 85398817 rs58273726 G A
SP1
4621614
chr16 85398947 rs186955568 C T
MTF1 NKX2-3 NKX2-8
4621615
Genes possibly regulated by vista23298[chr16:85398689-85398993]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85391069 85393055 + RP11-680G10.1 ENSG00000261567.1 85391069 0.83 1.0 15130 92380
Expression level of Genes
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miRNAs possibly regulated by vista23298[chr16:85398689-85398993]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results