EnhancerDB
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  3. vista23300[chr16:85415557-85415973]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23300[chr16:85415557-85415973]
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Tissue distribution of vista23300
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Transcription factor that possibly regulate vista23300[chr16:85415557-85415973]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85415248 85416062 POLR2A UCSC Txn Factor no Conserved 108214131
chr16 85415487 85416089 ZBTB7A UCSC Txn Factor no Conserved 108214141
chr16 85415508 85416058 GATA2 UCSC Txn Factor no Conserved 108214144
chr16 85415537 85416036 GATA1 UCSC Txn Factor no Conserved 108214148
chr16 85415539 85415944 TBL1XR1 UCSC Txn Factor no Conserved 108214149
chr16 85415542 85415982 UBTF UCSC Txn Factor no Conserved 108214150
chr16 85415553 85415974 EP300 UCSC Txn Factor no Conserved 108214157
chr16 85415554 85416010 JUND UCSC Txn Factor no Conserved 108214158
chr16 85415565 85415976 CCNT2 UCSC Txn Factor no Conserved 108214160
chr16 85415567 85416066 TEAD4 UCSC Txn Factor no Conserved 108214162
chr16 85415574 85416053 BHLHE40 UCSC Txn Factor no Conserved 108214167
chr16 85415575 85415967 HMGN3 UCSC Txn Factor no Conserved 108214169
chr16 85415594 85415989 TAL1 UCSC Txn Factor no Conserved 108214176
chr16 85415594 85416089 NR2F2 UCSC Txn Factor no Conserved 108214178
chr16 85415598 85415984 RCOR1 UCSC Txn Factor no Conserved 108214181
chr16 85415608 85415957 PML UCSC Txn Factor no Conserved 108214185
chr16 85415610 85416020 GABPA UCSC Txn Factor no Conserved 108214188
chr16 85415612 85415898 EGR1 UCSC Txn Factor no Conserved 108214192
chr16 85415653 85415853 STAT5A UCSC Txn Factor no Conserved 108214205
chr16 85415656 85415851 MAZ UCSC Txn Factor no Conserved 108214209
chr16 85415664 85415994 E2F6 UCSC Txn Factor no Conserved 108214213
chr16 85415702 85415960 E2F4 UCSC Txn Factor no Conserved 108214218
chr16 85415558 85415566 EHF JASPAR yes 12054738
chr16 85415558 85415566 EHF JASPAR yes 49407990
chr16 85415559 85415566 SPI1 JASPAR yes 12054739
chr16 85415559 85415566 SPI1 JASPAR yes 49407991
chr16 85415568 85415572 H4TF2 TRANSFAC yes 12054740
chr16 85415568 85415572 H4TF2 TRANSFAC yes 49407992
chr16 85415589 85415592 MYB TRANSFAC yes 12054741
chr16 85415589 85415592 MYB TRANSFAC yes 49407993
chr16 85415600 85415613 SMAD2 JASPAR yes 12054742
chr16 85415600 85415613 SMAD2 JASPAR yes 49407994
chr16 85415602 85415615 SMAD2 JASPAR yes 12054743
chr16 85415602 85415615 SMAD2 JASPAR yes 49407995
chr16 85415604 85415608 NFE TRANSFAC yes 12054744
chr16 85415604 85415608 NFE TRANSFAC yes 49407996
chr16 85415699 85415709 CUX1 JASPAR yes 12054745
chr16 85415699 85415709 CUX2 JASPAR yes 12054746
chr16 85415699 85415709 CUX1 JASPAR yes 49407997
chr16 85415699 85415709 CUX2 JASPAR yes 49407998
chr16 85415699 85415711 PBX1 JASPAR yes 12054747
chr16 85415699 85415711 PBX1 JASPAR yes 49407999
chr16 85415713 85415722 TFAP2A JASPAR yes 12054748
chr16 85415713 85415722 TFAP2A JASPAR yes 49408000
chr16 85415727 85415731 LFA1 TRANSFAC yes 12054749
chr16 85415727 85415731 LFA1 TRANSFAC yes 49408001
chr16 85415733 85415743 ZNF740 JASPAR yes 12054750
chr16 85415733 85415743 ZNF740 JASPAR yes 49408002
chr16 85415735 85415749 GLIS2 JASPAR yes 12054751
chr16 85415735 85415749 GLIS2 JASPAR yes 49408003
chr16 85415744 85415755 RUNX1 JASPAR yes 12054752
chr16 85415744 85415755 RUNX1 JASPAR yes 49408004
chr16 85415746 85415760 GATA2 JASPAR yes 12054753
chr16 85415746 85415760 GATA2 JASPAR yes 49408005
chr16 85415755 85415770 RFX5 JASPAR yes 12054754
chr16 85415755 85415770 RFX5 JASPAR yes 49408006
chr16 85415778 85415783 SP1 TRANSFAC yes 12054755
chr16 85415778 85415783 SP1 TRANSFAC yes 49408007
chr16 85415780 85415791 TFAP2A JASPAR yes 12054756
chr16 85415780 85415791 TFAP2A JASPAR yes 49408008
chr16 85415781 85415790 TFAP2A JASPAR yes 12054757
chr16 85415781 85415790 TFAP2A JASPAR yes 49408009
chr16 85415796 85415801 SP1 TRANSFAC yes 12054758
chr16 85415796 85415801 SP1 TRANSFAC yes 49408010
chr16 85415806 85415817 FOSL2 JASPAR yes 12054759
chr16 85415806 85415817 FOSL2 JASPAR yes 49408011
chr16 85415807 85415813 YY1 JASPAR yes 12054760
chr16 85415807 85415813 YY1 JASPAR yes 49408012
chr16 85415807 85415818 NFE2 JASPAR yes 12054761
chr16 85415807 85415818 NFE2 JASPAR yes 49408013
chr16 85415812 85415833 ZNF263 JASPAR yes 12054762
chr16 85415812 85415833 ZNF263 JASPAR yes 49408014
chr16 85415816 85415833 RXRA JASPAR yes 12054763
chr16 85415816 85415833 RXRA JASPAR yes 49408015
chr16 85415841 85415845 ESR1 TRANSFAC yes 12054764
chr16 85415841 85415845 ESR1 TRANSFAC yes 49408016
chr16 85415846 85415867 ZNF263 JASPAR yes 12054765
chr16 85415846 85415867 ZNF263 JASPAR yes 49408017
chr16 85415853 85415860 SP1 TRANSFAC yes 12054766
chr16 85415853 85415860 SP1 TRANSFAC yes 49408018
chr16 85415855 85415860 SP1 TRANSFAC yes 12054767
chr16 85415855 85415860 SP1 TRANSFAC yes 49408019
chr16 85415855 85415869 GATA2 JASPAR yes 12054768
chr16 85415855 85415869 GATA2 JASPAR yes 49408020
chr16 85415859 85415867 GATA3 JASPAR yes 12054769
chr16 85415859 85415867 GATA5 JASPAR yes 12054770
chr16 85415859 85415867 GATA3 JASPAR yes 49408021
chr16 85415859 85415867 GATA5 JASPAR yes 49408022
chr16 85415878 85415888 GABPA JASPAR yes 12054771
chr16 85415878 85415888 GABPA JASPAR yes 49408023
chr16 85415881 85415886 ETS2 TRANSFAC yes 12054772
chr16 85415881 85415886 ETS2 TRANSFAC yes 49408024
chr16 85415898 85415913 RUNX2 JASPAR yes 12054773
chr16 85415898 85415913 RUNX2 JASPAR yes 49408025
chr16 85415907 85415912 SP1 TRANSFAC yes 12054774
chr16 85415907 85415912 SP1 TRANSFAC yes 49408026
chr16 85415910 85415920 SP1 JASPAR yes 12054775
chr16 85415910 85415920 SP1 JASPAR yes 49408027
chr16 85415911 85415921 SP1 JASPAR yes 12054776
chr16 85415911 85415921 SP1 JASPAR yes 49408028
chr16 85415912 85415916 LFA1 TRANSFAC yes 12054777
chr16 85415912 85415916 LFA1 TRANSFAC yes 49408029
SNP sites on vista23300[chr16:85415557-85415973]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85415579 rs4783184 C A
BHLHE40 CCNT2 EP300 GATA1 GATA2 HMGN3 JUND POLR2A TBL1XR1 TEAD4 UBTF ZBTB7A
4621926
chr16 85415615 rs145481144 A G
BHLHE40 CCNT2 EGR1 EP300 GABPA GATA1 GATA2 HMGN3 JUND NR2F2 PML POLR2A RCOR1 SMAD2 TAL1 TBL1XR1 TEAD4 UBTF ZBTB7A
4621927
chr16 85415626 rs4783185 A G
BHLHE40 CCNT2 EGR1 EP300 GABPA GATA1 GATA2 HMGN3 JUND NR2F2 PML POLR2A RCOR1 TAL1 TBL1XR1 TEAD4 UBTF ZBTB7A
4621928
chr16 85415734 rs4783186 T C
BHLHE40 CCNT2 E2F4 E2F6 EGR1 EP300 GABPA GATA1 GATA2 HMGN3 JUND MAZ NR2F2 PML POLR2A RCOR1 STAT5A TAL1 TBL1XR1 TEAD4 UBTF ZBTB7A ZNF740
4621929
chr16 85415743 rs531785892 C A,T
BHLHE40 CCNT2 E2F4 E2F6 EGR1 EP300 GABPA GATA1 GATA2 GLIS2 HMGN3 JUND MAZ NR2F2 PML POLR2A RCOR1 STAT5A TAL1 TBL1XR1 TEAD4 UBTF ZBTB7A ZNF740
4621930
chr16 85415747 rs58312231 A G
BHLHE40 CCNT2 E2F4 E2F6 EGR1 EP300 GABPA GATA1 GATA2 GLIS2 HMGN3 JUND MAZ NR2F2 PML POLR2A RCOR1 RUNX1 STAT5A TAL1 TBL1XR1 TEAD4 UBTF ZBTB7A
4621931
chr16 85415838 rs4783187 T C
BHLHE40 CCNT2 E2F4 E2F6 EGR1 EP300 GABPA GATA1 GATA2 HMGN3 JUND MAZ NR2F2 PML POLR2A RCOR1 STAT5A TAL1 TBL1XR1 TEAD4 UBTF ZBTB7A
4621932
chr16 85415898 rs375207420 C T
BHLHE40 CCNT2 E2F4 E2F6 EGR1 EP300 GABPA GATA1 GATA2 HMGN3 JUND NR2F2 PML POLR2A RCOR1 RUNX2 TAL1 TBL1XR1 TEAD4 UBTF ZBTB7A
4621933
chr16 85415922 rs116425990 C A,T
BHLHE40 CCNT2 E2F4 E2F6 EP300 GABPA GATA1 GATA2 HMGN3 JUND NR2F2 PML POLR2A RCOR1 TAL1 TBL1XR1 TEAD4 UBTF ZBTB7A
4621934
chr16 85415951 rs8059258 A G
BHLHE40 CCNT2 E2F4 E2F6 EP300 GABPA GATA1 GATA2 HMGN3 JUND NR2F2 PML POLR2A RCOR1 TAL1 TEAD4 UBTF ZBTB7A
4621935
Genes possibly regulated by vista23300[chr16:85415557-85415973]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85391069 85393055 + RP11-680G10.1 ENSG00000261567.1 85391069 0.83 1.0 15130 75512
Expression level of Genes
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miRNAs possibly regulated by vista23300[chr16:85415557-85415973]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results