EnhancerDB
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  3. vista23301[chr16:85418434-85418651]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23301[chr16:85418434-85418651]
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Tissue distribution of vista23301
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Transcription factor that possibly regulate vista23301[chr16:85418434-85418651]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85418426 85418756 EP300 UCSC Txn Factor no Conserved 108214263
chr16 85418423 85418434 E2F6 JASPAR yes 12055136
chr16 85418423 85418434 E2F6 JASPAR yes 49408030
chr16 85418456 85418460 NFE TRANSFAC yes 12055137
chr16 85418456 85418460 NFE TRANSFAC yes 49408031
chr16 85418481 85418496 TFAP2A JASPAR yes 12055138
chr16 85418481 85418496 TFAP2A JASPAR yes 49408032
chr16 85418483 85418498 TFAP2C JASPAR yes 12055139
chr16 85418483 85418498 TFAP2C JASPAR yes 49408033
chr16 85418484 85418495 EBF1 JASPAR yes 12055140
chr16 85418484 85418495 EBF1 JASPAR yes 49408034
chr16 85418490 85418495 SP1 TRANSFAC yes 12055141
chr16 85418490 85418495 SP1 TRANSFAC yes 49408035
chr16 85418490 85418504 PLAG1 JASPAR yes 12055142
chr16 85418490 85418504 PLAG1 JASPAR yes 49408036
chr16 85418490 85418505 TFAP2C JASPAR yes 12055143
chr16 85418490 85418505 TFAP2C JASPAR yes 49408037
chr16 85418492 85418504 TFAP2A JASPAR yes 12055144
chr16 85418492 85418504 TFAP2B JASPAR yes 12055145
chr16 85418492 85418504 TFAP2C JASPAR yes 12055146
chr16 85418492 85418504 TFAP2A JASPAR yes 49408038
chr16 85418492 85418504 TFAP2B JASPAR yes 49408039
chr16 85418492 85418504 TFAP2C JASPAR yes 49408040
chr16 85418492 85418507 TFAP2A JASPAR yes 12055147
chr16 85418492 85418507 TFAP2C JASPAR yes 12055148
chr16 85418492 85418507 TFAP2A JASPAR yes 49408041
chr16 85418492 85418507 TFAP2C JASPAR yes 49408042
chr16 85418493 85418504 TFAP2B JASPAR yes 12055149
chr16 85418493 85418504 TFAP2B JASPAR yes 49408043
chr16 85418499 85418513 TLX1 JASPAR yes 12055150
chr16 85418499 85418513 TLX1 JASPAR yes 49408044
chr16 85418501 85418520 PAX5 JASPAR yes 12055151
chr16 85418501 85418520 PAX5 JASPAR yes 49408045
chr16 85418504 85418521 PAX1 JASPAR yes 12055152
chr16 85418504 85418521 PAX9 JASPAR yes 12055153
chr16 85418504 85418521 PAX1 JASPAR yes 49408046
chr16 85418504 85418521 PAX9 JASPAR yes 49408047
chr16 85418523 85418542 REST JASPAR yes 12055154
chr16 85418523 85418542 REST JASPAR yes 49408048
chr16 85418533 85418543 ETV1 JASPAR yes 12055155
chr16 85418533 85418543 ETV4 JASPAR yes 12055156
chr16 85418533 85418543 ETV5 JASPAR yes 12055157
chr16 85418533 85418543 ETV1 JASPAR yes 49408049
chr16 85418533 85418543 ETV4 JASPAR yes 49408050
chr16 85418533 85418543 ETV5 JASPAR yes 49408051
chr16 85418543 85418564 MAFG JASPAR yes 12055158
chr16 85418543 85418564 MAFG JASPAR yes 49408052
chr16 85418574 85418583 ZEB1 JASPAR yes 12055159
chr16 85418574 85418583 ZEB1 JASPAR yes 49408053
chr16 85418575 85418585 ID4 JASPAR yes 12055160
chr16 85418575 85418585 NHLH1 JASPAR yes 12055161
chr16 85418575 85418585 TCF3 JASPAR yes 12055162
chr16 85418575 85418585 TCF4 JASPAR yes 12055163
chr16 85418575 85418585 ID4 JASPAR yes 49408054
chr16 85418575 85418585 NHLH1 JASPAR yes 49408055
chr16 85418575 85418585 TCF3 JASPAR yes 49408056
chr16 85418575 85418585 TCF4 JASPAR yes 49408057
chr16 85418576 85418585 SNAI2 JASPAR yes 12055164
chr16 85418576 85418585 SNAI2 JASPAR yes 49408058
chr16 85418577 85418582 USF2 TRANSFAC yes 12055165
chr16 85418577 85418582 USF2 TRANSFAC yes 49408059
chr16 85418580 85418586 NFE2 TRANSFAC yes 12055166
chr16 85418580 85418586 NFE2 TRANSFAC yes 49408060
chr16 85418582 85418591 SP1 TRANSFAC yes 12055167
chr16 85418582 85418591 SP1 TRANSFAC yes 49408061
chr16 85418583 85418589 SP1 TRANSFAC yes 12055168
chr16 85418583 85418589 SP1 TRANSFAC yes 49408062
chr16 85418585 85418590 SP1 TRANSFAC yes 12055169
chr16 85418585 85418590 SP1 TRANSFAC yes 49408063
chr16 85418587 85418594 SP1 TRANSFAC yes 12055170
chr16 85418587 85418594 SP1 TRANSFAC yes 49408064
chr16 85418589 85418594 SP1 TRANSFAC yes 12055171
chr16 85418589 85418594 SP1 TRANSFAC yes 49408065
chr16 85418595 85418613 NFYA JASPAR yes 12055172
chr16 85418595 85418613 NFYA JASPAR yes 49408066
chr16 85418598 85418614 NFYA JASPAR yes 12055173
chr16 85418598 85418614 NFYA JASPAR yes 49408067
chr16 85418601 85418616 NFYB JASPAR yes 12055174
chr16 85418601 85418616 NFYB JASPAR yes 49408068
chr16 85418603 85418608 NFY TRANSFAC yes 12055175
chr16 85418603 85418608 NFY TRANSFAC yes 49408069
chr16 85418611 85418624 ZBTB18 JASPAR yes 12055176
chr16 85418611 85418624 ZBTB18 JASPAR yes 49408070
chr16 85418631 85418648 ZNF410 JASPAR yes 12055177
chr16 85418631 85418648 ZNF410 JASPAR yes 49408071
chr16 85418639 85418648 CDX1 JASPAR yes 12055178
chr16 85418639 85418648 CDX1 JASPAR yes 49408072
chr16 85418639 85418649 HOXC10 JASPAR yes 12055179
chr16 85418639 85418649 HOXD11 JASPAR yes 12055180
chr16 85418639 85418649 HOXC10 JASPAR yes 49408073
chr16 85418639 85418649 HOXD11 JASPAR yes 49408074
SNP sites on vista23301[chr16:85418434-85418651]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85418452 rs144794543 C A
EP300
4622006
chr16 85418465 rs11149740 G A
EP300
4622007
chr16 85418495 rs12934157 C T
EBF1 EP300 PLAG1 SP1 TFAP2A TFAP2B TFAP2C
4622008
chr16 85418548 rs369210550 C T
EP300 MAFG
4622009
chr16 85418565 rs57711600 A G
EP300
4622010
chr16 85418568 rs567321034 G A
EP300
4622011
Genes possibly regulated by vista23301[chr16:85418434-85418651]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85391069 85393055 + RP11-680G10.1 ENSG00000261567.1 85391069 0.83 1.0 15130 72635
Expression level of Genes
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miRNAs possibly regulated by vista23301[chr16:85418434-85418651]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results