EnhancerDB
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  3. vista23321[chr16:85570517-85570742]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23321[chr16:85570517-85570742]
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Tissue distribution of vista23321
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Transcription factor that possibly regulate vista23321[chr16:85570517-85570742]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85570321 85570880 POLR2A UCSC Txn Factor no Conserved 108215931
chr16 85570518 85570529 ESRRA JASPAR yes 12073465
chr16 85570518 85570529 ESRRA JASPAR yes 49408957
chr16 85570534 85570545 USF1 JASPAR yes 12073466
chr16 85570534 85570545 USF1 JASPAR yes 49408958
chr16 85570534 85570546 HES5 JASPAR yes 12073467
chr16 85570534 85570546 HES5 JASPAR yes 49408959
chr16 85570565 85570577 PROX1 JASPAR yes 12073468
chr16 85570565 85570577 PROX1 JASPAR yes 49408960
chr16 85570572 85570586 XBP1 JASPAR yes 12073469
chr16 85570572 85570586 XBP1 JASPAR yes 49408961
chr16 85570574 85570579 ATF1 TRANSFAC yes 12073470
chr16 85570574 85570579 ATF1 TRANSFAC yes 49408962
chr16 85570580 85570584 ESR1 TRANSFAC yes 12073471
chr16 85570580 85570584 ESR1 TRANSFAC yes 49408963
chr16 85570589 85570599 GABPA JASPAR yes 12073472
chr16 85570589 85570599 GABPA JASPAR yes 49408964
chr16 85570591 85570597 ETS1 JASPAR yes 12073473
chr16 85570591 85570597 SPI1 JASPAR yes 12073474
chr16 85570591 85570597 ETS1 JASPAR yes 49408965
chr16 85570591 85570597 SPI1 JASPAR yes 49408966
chr16 85570591 85570601 ELK1 JASPAR yes 12073475
chr16 85570591 85570601 ELK1 JASPAR yes 49408967
chr16 85570605 85570614 SP1 TRANSFAC yes 12073476
chr16 85570605 85570614 SP1 TRANSFAC yes 49408968
chr16 85570620 85570630 SP1 JASPAR yes 12073477
chr16 85570620 85570630 SP1 JASPAR yes 49408969
chr16 85570627 85570631 LFA1 TRANSFAC yes 12073478
chr16 85570627 85570631 LFA1 TRANSFAC yes 49408970
chr16 85570634 85570638 ESR1 TRANSFAC yes 12073479
chr16 85570634 85570638 ESR1 TRANSFAC yes 49408971
chr16 85570639 85570643 H4TF2 TRANSFAC yes 12073480
chr16 85570639 85570643 H4TF2 TRANSFAC yes 49408972
chr16 85570644 85570661 RARA JASPAR yes 12073481
chr16 85570644 85570661 RARA JASPAR yes 49408973
chr16 85570651 85570672 REST JASPAR yes 12073482
chr16 85570651 85570672 REST JASPAR yes 49408974
chr16 85570652 85570671 REST JASPAR yes 12073483
chr16 85570652 85570671 REST JASPAR yes 49408975
chr16 85570664 85570671 ETS1 TRANSFAC yes 12073484
chr16 85570664 85570671 ETS1 TRANSFAC yes 49408976
chr16 85570665 85570673 EHF JASPAR yes 12073485
chr16 85570665 85570673 EHF JASPAR yes 49408977
chr16 85570704 85570715 E2F6 JASPAR yes 12073486
chr16 85570704 85570715 E2F6 JASPAR yes 49408978
chr16 85570708 85570718 RELA JASPAR yes 12073487
chr16 85570708 85570718 REL JASPAR yes 12073488
chr16 85570708 85570718 RELA JASPAR yes 49408979
chr16 85570708 85570718 REL JASPAR yes 49408980
chr16 85570708 85570719 NFKB1 JASPAR yes 12073489
chr16 85570708 85570719 NFKB1 JASPAR yes 49408981
chr16 85570733 85570743 POU6F2 JASPAR yes 12073490
chr16 85570733 85570743 POU6F2 JASPAR yes 49408982
chr16 85570734 85570744 EMX1 JASPAR yes 12073491
chr16 85570734 85570744 NOTO JASPAR yes 12073492
chr16 85570734 85570744 EMX1 JASPAR yes 49408983
chr16 85570734 85570744 NOTO JASPAR yes 49408984
chr16 85570737 85570741 YY1 TRANSFAC yes 12073493
chr16 85570737 85570741 YY1 TRANSFAC yes 49408985
chr16 85570737 85570745 HOXA5 JASPAR yes 12073494
chr16 85570737 85570745 HOXA5 JASPAR yes 49408986
SNP sites on vista23321[chr16:85570517-85570742]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85570572 rs17801812 G A,T
POLR2A PROX1 XBP1
4625050
chr16 85570686 rs554153544 C T
POLR2A
4625051
chr16 85570687 rs369607878 G A,T
POLR2A
4625052
chr16 85570699 rs146499557 C T
POLR2A
4625053
Genes possibly regulated by vista23321[chr16:85570517-85570742]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85645015 85709810 + GSE1 ENSG00000131149.13 85645015 0.76 1.0 15131 25727
Expression level of Genes
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miRNAs possibly regulated by vista23321[chr16:85570517-85570742]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results