EnhancerDB
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  3. vista23339[chr16:85733301-85733460]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23339[chr16:85733301-85733460]
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Tissue distribution of vista23339
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Transcription factor that possibly regulate vista23339[chr16:85733301-85733460]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85733317 85733327 TFEB JASPAR yes 12090244
chr16 85733317 85733327 TFEC JASPAR yes 12090245
chr16 85733317 85733327 TFEB JASPAR yes 49409952
chr16 85733317 85733327 TFEC JASPAR yes 49409953
chr16 85733317 85733328 USF1 JASPAR yes 12090246
chr16 85733317 85733328 USF2 JASPAR yes 12090247
chr16 85733317 85733328 USF1 JASPAR yes 49409954
chr16 85733317 85733328 USF2 JASPAR yes 49409955
chr16 85733318 85733328 MAX JASPAR yes 12090248
chr16 85733318 85733328 MAX JASPAR yes 49409956
chr16 85733338 85733348 TEAD1 JASPAR yes 12090249
chr16 85733338 85733348 TEAD1 JASPAR yes 49409957
chr16 85733344 85733353 HIC2 JASPAR yes 12090250
chr16 85733344 85733353 HIC2 JASPAR yes 49409958
chr16 85733347 85733351 LFA1 TRANSFAC yes 12090251
chr16 85733347 85733351 LFA1 TRANSFAC yes 49409959
chr16 85733347 85733359 HES5 JASPAR yes 12090252
chr16 85733347 85733359 HES7 JASPAR yes 12090253
chr16 85733347 85733359 PKNOX1 JASPAR yes 12090254
chr16 85733347 85733359 PKNOX2 JASPAR yes 12090255
chr16 85733347 85733359 TGIF2 JASPAR yes 12090256
chr16 85733347 85733359 HES5 JASPAR yes 49409960
chr16 85733347 85733359 HES7 JASPAR yes 49409961
chr16 85733347 85733359 PKNOX1 JASPAR yes 49409962
chr16 85733347 85733359 PKNOX2 JASPAR yes 49409963
chr16 85733347 85733359 TGIF2 JASPAR yes 49409964
chr16 85733383 85733398 AR JASPAR yes 12090257
chr16 85733383 85733398 AR JASPAR yes 49409965
chr16 85733406 85733420 GLIS3 JASPAR yes 12090258
chr16 85733406 85733420 ZIC1 JASPAR yes 12090259
chr16 85733406 85733420 GLIS3 JASPAR yes 49409966
chr16 85733406 85733420 ZIC1 JASPAR yes 49409967
chr16 85733406 85733421 ZIC3 JASPAR yes 12090260
chr16 85733406 85733421 ZIC4 JASPAR yes 12090261
chr16 85733406 85733421 ZIC3 JASPAR yes 49409968
chr16 85733406 85733421 ZIC4 JASPAR yes 49409969
chr16 85733456 85733466 NKX2-3 JASPAR yes 12090262
chr16 85733456 85733466 NKX2-3 JASPAR yes 49409970
chr16 85733457 85733466 NKX2-8 JASPAR yes 12090263
chr16 85733457 85733466 NKX2-8 JASPAR yes 49409971
SNP sites on vista23339[chr16:85733301-85733460]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85733310 rs385270 T C no 4627509
chr16 85733311 rs181336607 G A,C no 4627510
chr16 85733346 rs183651565 G C
HIC2 TEAD1
4627511
chr16 85733370 rs114863263 C A no 4627512
chr16 85733380 rs114421296 A T no 4627513
Genes possibly regulated by vista23339[chr16:85733301-85733460]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85645015 85709810 + GSE1 ENSG00000131149.13 85645015 0.76 1.0 15131 11714
chr16 85709804 85723679 - GINS2 ENSG00000131153.4 85723679 0.95 0.99 15132 90378
chr16 85723690 85784735 - C16orf74 ENSG00000154102.6 85784735 0.95 1.0 15133 48725
chr16 85805364 85833214 - EMC8 ENSG00000131148.4 85833214 0.67 1.0 15134 246
chr16 85832239 85840650 + COX4I1 ENSG00000131143.4 85832239 0.68 1.0 15135 1221
Expression level of Genes
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miRNAs possibly regulated by vista23339[chr16:85733301-85733460]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 85775237 85775256 - hsa-miR-1910-3p MIMAT0026917 85784701 0.10075391165399424 0.842353 0.676023 634
Expression level of miRNAs
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