EnhancerDB
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  3. vista23340[chr16:85734545-85734806]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23340[chr16:85734545-85734806]
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Tissue distribution of vista23340
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Transcription factor that possibly regulate vista23340[chr16:85734545-85734806]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85734559 85734572 SMAD2 JASPAR yes 12090419
chr16 85734559 85734572 SMAD2 JASPAR yes 49409972
chr16 85734584 85734592 FEV JASPAR yes 12090420
chr16 85734584 85734592 FEV JASPAR yes 49409973
chr16 85734593 85734597 YY1 TRANSFAC yes 12090421
chr16 85734593 85734597 YY1 TRANSFAC yes 49409974
chr16 85734593 85734603 HOXA13 JASPAR yes 12090422
chr16 85734593 85734603 HOXB13 JASPAR yes 12090423
chr16 85734593 85734603 HOXD13 JASPAR yes 12090424
chr16 85734593 85734603 HOXA13 JASPAR yes 49409975
chr16 85734593 85734603 HOXB13 JASPAR yes 49409976
chr16 85734593 85734603 HOXD13 JASPAR yes 49409977
chr16 85734643 85734654 TFAP2C JASPAR yes 12090425
chr16 85734643 85734654 TFAP2C JASPAR yes 49409978
chr16 85734664 85734675 NFE2L2 JASPAR yes 12090426
chr16 85734664 85734675 NFE2L2 JASPAR yes 49409979
chr16 85734675 85734686 ELK4 JASPAR yes 12090427
chr16 85734675 85734686 FLI1 JASPAR yes 12090428
chr16 85734675 85734686 ELK4 JASPAR yes 49409980
chr16 85734675 85734686 FLI1 JASPAR yes 49409981
chr16 85734676 85734686 GABPA JASPAR yes 12090429
chr16 85734676 85734686 GABPA JASPAR yes 49409982
chr16 85734676 85734689 ELF1 JASPAR yes 12090430
chr16 85734676 85734689 ELF1 JASPAR yes 49409983
chr16 85734722 85734726 LFA1 TRANSFAC yes 12090431
chr16 85734722 85734726 LFA1 TRANSFAC yes 49409984
chr16 85734739 85734745 MAZ TRANSFAC yes 12090432
chr16 85734739 85734745 MAZ TRANSFAC yes 49409985
chr16 85734739 85734750 E2F6 JASPAR yes 12090433
chr16 85734739 85734750 E2F6 JASPAR yes 49409986
chr16 85734741 85734749 SP1 TRANSFAC yes 12090434
chr16 85734741 85734749 SP1 TRANSFAC yes 49409987
chr16 85734743 85734749 MAZ TRANSFAC yes 12090435
chr16 85734743 85734749 MAZ TRANSFAC yes 49409988
chr16 85734743 85734754 E2F6 JASPAR yes 12090436
chr16 85734743 85734754 E2F6 JASPAR yes 49409989
chr16 85734749 85734759 MAX JASPAR yes 12090437
chr16 85734749 85734759 MAX JASPAR yes 49409990
chr16 85734749 85734761 HES5 JASPAR yes 12090438
chr16 85734749 85734761 HES5 JASPAR yes 49409991
chr16 85734750 85734760 BHLHE40 JASPAR yes 12090439
chr16 85734750 85734760 BHLHE41 JASPAR yes 12090440
chr16 85734750 85734760 CLOCK JASPAR yes 12090441
chr16 85734750 85734760 HEY1 JASPAR yes 12090442
chr16 85734750 85734760 MAX JASPAR yes 12090443
chr16 85734750 85734760 MLXIPL JASPAR yes 12090444
chr16 85734750 85734760 MLX JASPAR yes 12090445
chr16 85734750 85734760 MNT JASPAR yes 12090446
chr16 85734750 85734760 TFE3 JASPAR yes 12090447
chr16 85734750 85734760 TFEB JASPAR yes 12090448
chr16 85734750 85734760 BHLHE40 JASPAR yes 49409992
chr16 85734750 85734760 BHLHE41 JASPAR yes 49409993
chr16 85734750 85734760 CLOCK JASPAR yes 49409994
chr16 85734750 85734760 HEY1 JASPAR yes 49409995
chr16 85734750 85734760 MAX JASPAR yes 49409996
chr16 85734750 85734760 MLXIPL JASPAR yes 49409997
chr16 85734750 85734760 MLX JASPAR yes 49409998
chr16 85734750 85734760 MNT JASPAR yes 49409999
chr16 85734750 85734760 TFE3 JASPAR yes 49410000
chr16 85734750 85734760 TFEB JASPAR yes 49410001
chr16 85734752 85734757 MYC TRANSFAC yes 12090449
chr16 85734752 85734757 USF1 TRANSFAC yes 12090450
chr16 85734752 85734757 USF2 TRANSFAC yes 12090451
chr16 85734752 85734757 MYC TRANSFAC yes 49410002
chr16 85734752 85734757 USF1 TRANSFAC yes 49410003
chr16 85734752 85734757 USF2 TRANSFAC yes 49410004
chr16 85734788 85734797 THAP1 JASPAR yes 12090452
chr16 85734788 85734797 THAP1 JASPAR yes 49410005
chr16 85734792 85734813 REST JASPAR yes 12090453
chr16 85734792 85734813 REST JASPAR yes 49410006
chr16 85734793 85734812 REST JASPAR yes 12090454
chr16 85734793 85734812 REST JASPAR yes 49410007
SNP sites on vista23340[chr16:85734545-85734806]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85734572 rs77455942 A C
SMAD2
4627546
chr16 85734582 rs151263031 C G no 4627547
chr16 85734618 rs140491984 G C no 4627548
chr16 85734623 rs114095936 C T no 4627549
chr16 85734699 rs79506783 A C no 4627550
chr16 85734806 rs147716109 A G
REST
4627551
Genes possibly regulated by vista23340[chr16:85734545-85734806]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85645015 85709810 + GSE1 ENSG00000131149.13 85645015 0.76 1.0 15131 10470
chr16 85709804 85723679 - GINS2 ENSG00000131153.4 85723679 0.95 0.99 15132 89134
chr16 85723690 85784735 - C16orf74 ENSG00000154102.6 85784735 0.95 1.0 15133 50071
chr16 85805364 85833214 - EMC8 ENSG00000131148.4 85833214 0.67 1.0 15134 1592
chr16 85832239 85840650 + COX4I1 ENSG00000131143.4 85832239 0.68 1.0 15135 2567
Expression level of Genes
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miRNAs possibly regulated by vista23340[chr16:85734545-85734806]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 85775237 85775256 - hsa-miR-1910-3p MIMAT0026917 85784701 0.10363237256913421 0.842353 0.676023 634
Expression level of miRNAs
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