EnhancerDB
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  3. vista23346[chr16:85783855-85783992]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23346[chr16:85783855-85783992]
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Tissue distribution of vista23346
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Transcription factor that possibly regulate vista23346[chr16:85783855-85783992]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85783768 85783904 GATA3 UCSC Txn Factor no Conserved 108217142
chr16 85783865 85783876 TFAP2A JASPAR yes 49410205
chr16 85783865 85783876 TFAP2B JASPAR yes 49410206
chr16 85783865 85783876 TFAP2C JASPAR yes 49410207
chr16 85783871 85783876 SP1 TRANSFAC yes 49410208
chr16 85783882 85783892 NFKB1 JASPAR yes 49410209
chr16 85783894 85783899 SP1 TRANSFAC yes 49410210
chr16 85783895 85783910 NR2C2 JASPAR yes 49410211
chr16 85783904 85783912 SP1 TRANSFAC yes 49410212
chr16 85783904 85783914 SP1 JASPAR yes 49410213
chr16 85783905 85783911 SP1 TRANSFAC yes 49410214
chr16 85783905 85783915 SP1 JASPAR yes 49410215
chr16 85783907 85783912 SP1 TRANSFAC yes 49410216
chr16 85783918 85783922 NFE TRANSFAC yes 49410217
chr16 85783919 85783924 GATA2 JASPAR yes 49410218
chr16 85783919 85783933 EBF1 JASPAR yes 49410219
chr16 85783920 85783935 TFAP2C JASPAR yes 49410220
chr16 85783921 85783932 EBF1 JASPAR yes 49410221
chr16 85783921 85783933 TFAP2A JASPAR yes 49410222
chr16 85783921 85783933 TFAP2B JASPAR yes 49410223
chr16 85783921 85783933 TFAP2C JASPAR yes 49410224
chr16 85783933 85783944 GCM1 JASPAR yes 49410225
chr16 85783967 85783984 PAX1 JASPAR yes 49410226
chr16 85783967 85783984 PAX9 JASPAR yes 49410227
SNP sites on vista23346[chr16:85783855-85783992]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85783856 rs188350397 T C
GATA3
4628281
chr16 85783861 rs532360912 C T
GATA3
4628282
chr16 85783870 rs73257245 G A
GATA3 TFAP2A TFAP2B TFAP2C
4628283
chr16 85783903 rs301144 A G
GATA3 NR2C2
4628284
chr16 85783929 rs556918288 G T
EBF1 TFAP2A TFAP2B TFAP2C
4628285
chr16 85783991 rs142816631 CAGG C no 4628286
Genes possibly regulated by vista23346[chr16:85783855-85783992]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85709804 85723679 - GINS2 ENSG00000131153.4 85723679 0.95 0.99 15132 39824
chr16 85723690 85784735 - C16orf74 ENSG00000154102.6 85784735 0.95 1.0 15133 99257
chr16 85805364 85833214 - EMC8 ENSG00000131148.4 85833214 0.67 1.0 15134 50778
chr16 85832239 85840650 + COX4I1 ENSG00000131143.4 85832239 0.68 1.0 15135 51753
Expression level of Genes
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miRNAs possibly regulated by vista23346[chr16:85783855-85783992]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 85775237 85775256 - hsa-miR-1910-3p MIMAT0026917 85784701 0.007772020725388601 0.842353 0.676023 634
Expression level of miRNAs
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