EnhancerDB
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  3. vista23350[chr16:85878522-85878578]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23350[chr16:85878522-85878578]
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Tissue distribution of vista23350
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Transcription factor that possibly regulate vista23350[chr16:85878522-85878578]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85878391 85878663 FOXA1 UCSC Txn Factor no Conserved 108217226
chr16 85878411 85878640 FOXA2 UCSC Txn Factor no Conserved 108217227
chr16 85878514 85878527 ZBTB18 JASPAR yes 12100264
chr16 85878514 85878527 ZBTB18 JASPAR yes 49410369
chr16 85878516 85878526 MSC JASPAR yes 12100265
chr16 85878516 85878526 MYF6 JASPAR yes 12100266
chr16 85878516 85878526 NHLH1 JASPAR yes 12100267
chr16 85878516 85878526 TFAP4 JASPAR yes 12100268
chr16 85878516 85878526 MSC JASPAR yes 49410370
chr16 85878516 85878526 MYF6 JASPAR yes 49410371
chr16 85878516 85878526 NHLH1 JASPAR yes 49410372
chr16 85878516 85878526 TFAP4 JASPAR yes 49410373
chr16 85878547 85878551 YY1 TRANSFAC yes 12100269
chr16 85878547 85878551 YY1 TRANSFAC yes 49410374
chr16 85878565 85878576 E2F6 JASPAR yes 12100270
chr16 85878565 85878576 E2F6 JASPAR yes 49410375
chr16 85878567 85878588 REST JASPAR yes 12100271
chr16 85878567 85878588 REST JASPAR yes 49410376
chr16 85878568 85878587 REST JASPAR yes 12100272
chr16 85878568 85878587 REST JASPAR yes 49410377
SNP sites on vista23350[chr16:85878522-85878578]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85878525 rs370051532 T C
FOXA1 FOXA2 MSC MYF6 NHLH1 TFAP4 ZBTB18
4629048
chr16 85878540 rs72805142 G T
FOXA1 FOXA2
4629049
Genes possibly regulated by vista23350[chr16:85878522-85878578]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85723690 85784735 - C16orf74 ENSG00000154102.6 85784735 0.95 1.0 15133 6213
chr16 85805364 85833214 - EMC8 ENSG00000131148.4 85833214 0.67 1.0 15134 54692
chr16 85832239 85840650 + COX4I1 ENSG00000131143.4 85832239 0.68 1.0 15135 53717
chr16 85932409 85956215 + IRF8 ENSG00000140968.6 85932409 0.91 0.97 15136 46169
Expression level of Genes
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miRNAs possibly regulated by vista23350[chr16:85878522-85878578]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 85952002 85952022 + hsa-miR-6774-3p MIMAT0027449 85932767 5.533013648100332e-05 0.0 0.0 636
Expression level of miRNAs
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