EnhancerDB
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  3. vista23353[chr16:85903471-85903703]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23353[chr16:85903471-85903703]
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Tissue distribution of vista23353
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Transcription factor that possibly regulate vista23353[chr16:85903471-85903703]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85903466 85903472 SOX10 JASPAR yes 12101424
chr16 85903466 85903472 SOX10 JASPAR yes 49410454
chr16 85903470 85903481 NFE2L2 JASPAR yes 12101425
chr16 85903470 85903481 NFE2L2 JASPAR yes 49410455
chr16 85903473 85903479 GATA3 JASPAR yes 12101426
chr16 85903473 85903479 GATA3 JASPAR yes 49410456
chr16 85903483 85903495 MEF2A JASPAR yes 12101427
chr16 85903483 85903495 MEF2A JASPAR yes 49410457
chr16 85903489 85903500 STAT1 JASPAR yes 12101428
chr16 85903489 85903500 STAT1 JASPAR yes 49410458
chr16 85903502 85903508 TCF1 TRANSFAC yes 12101429
chr16 85903502 85903508 TCF1 TRANSFAC yes 49410459
chr16 85903521 85903531 NFKB1 JASPAR yes 12101430
chr16 85903521 85903531 NFKB1 JASPAR yes 49410460
chr16 85903529 85903544 SCRT1 JASPAR yes 12101431
chr16 85903529 85903544 SCRT1 JASPAR yes 49410461
chr16 85903540 85903545 ETS2 TRANSFAC yes 12101432
chr16 85903540 85903545 ETS2 TRANSFAC yes 49410462
chr16 85903549 85903564 JUND JASPAR yes 12101433
chr16 85903549 85903564 JUND JASPAR yes 49410463
chr16 85903554 85903558 ESR1 TRANSFAC yes 12101434
chr16 85903554 85903558 ESR1 TRANSFAC yes 49410464
chr16 85903566 85903570 ESR1 TRANSFAC yes 12101435
chr16 85903566 85903570 ESR1 TRANSFAC yes 49410465
chr16 85903570 85903581 STAT1 JASPAR yes 12101436
chr16 85903570 85903581 STAT3 JASPAR yes 12101437
chr16 85903570 85903581 STAT1 JASPAR yes 49410466
chr16 85903570 85903581 STAT3 JASPAR yes 49410467
chr16 85903579 85903585 SOX10 JASPAR yes 12101438
chr16 85903579 85903585 SOX10 JASPAR yes 49410468
chr16 85903581 85903593 YY1 JASPAR yes 12101439
chr16 85903581 85903593 YY1 JASPAR yes 49410469
chr16 85903584 85903595 CEBPA JASPAR yes 12101440
chr16 85903584 85903595 CEBPA JASPAR yes 49410470
chr16 85903585 85903596 CEBPB JASPAR yes 12101441
chr16 85903585 85903596 CEBPB JASPAR yes 49410471
chr16 85903588 85903604 SOX4 JASPAR yes 12101442
chr16 85903588 85903604 SOX4 JASPAR yes 49410472
chr16 85903601 85903613 POU2F1 JASPAR yes 12101443
chr16 85903601 85903613 POU2F1 JASPAR yes 49410473
chr16 85903605 85903620 HSF1 JASPAR yes 12101444
chr16 85903605 85903620 HSF1 JASPAR yes 49410474
chr16 85903606 85903619 HSF1 JASPAR yes 12101445
chr16 85903606 85903619 HSF2 JASPAR yes 12101446
chr16 85903606 85903619 HSF4 JASPAR yes 12101447
chr16 85903606 85903619 HSF1 JASPAR yes 49410475
chr16 85903606 85903619 HSF2 JASPAR yes 49410476
chr16 85903606 85903619 HSF4 JASPAR yes 49410477
chr16 85903661 85903666 MYC TRANSFAC yes 12101448
chr16 85903661 85903666 MYC TRANSFAC yes 49410478
chr16 85903673 85903687 E2F7 JASPAR yes 12101449
chr16 85903673 85903687 E2F7 JASPAR yes 49410479
chr16 85903694 85903704 EN2 JASPAR yes 12101450
chr16 85903694 85903704 GBX2 JASPAR yes 12101451
chr16 85903694 85903704 HESX1 JASPAR yes 12101452
chr16 85903694 85903704 EN2 JASPAR yes 49410480
chr16 85903694 85903704 GBX2 JASPAR yes 49410481
chr16 85903694 85903704 HESX1 JASPAR yes 49410482
chr16 85903695 85903703 BARX1 JASPAR yes 12101453
chr16 85903695 85903703 EN1 JASPAR yes 12101454
chr16 85903695 85903703 ISL2 JASPAR yes 12101455
chr16 85903695 85903703 MSX1 JASPAR yes 12101456
chr16 85903695 85903703 MSX2 JASPAR yes 12101457
chr16 85903695 85903703 PDX1 JASPAR yes 12101458
chr16 85903695 85903703 BARX1 JASPAR yes 49410483
chr16 85903695 85903703 EN1 JASPAR yes 49410484
chr16 85903695 85903703 ISL2 JASPAR yes 49410485
chr16 85903695 85903703 MSX1 JASPAR yes 49410486
chr16 85903695 85903703 MSX2 JASPAR yes 49410487
chr16 85903695 85903703 PDX1 JASPAR yes 49410488
SNP sites on vista23353[chr16:85903471-85903703]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85903475 rs530946180 G A
GATA3 NFE2L2
4629529
chr16 85903526 rs151057515 A G
NFKB1
4629530
chr16 85903630 rs3891838 G A,C no 4629531
chr16 85903664 rs535336746 G C
MYC
4629532
chr16 85903665 rs191563417 T G
MYC
4629533
chr16 85903676 rs12930347 T C
E2F7
4629534
chr16 85903690 rs76469559 A G no 4629535
Genes possibly regulated by vista23353[chr16:85903471-85903703]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85805364 85833214 - EMC8 ENSG00000131148.4 85833214 0.67 1.0 15134 29743
chr16 85832239 85840650 + COX4I1 ENSG00000131143.4 85832239 0.68 1.0 15135 28768
chr16 85932409 85956215 + IRF8 ENSG00000140968.6 85932409 0.91 0.97 15136 71294
Expression level of Genes
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miRNAs possibly regulated by vista23353[chr16:85903471-85903703]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 85952002 85952022 + hsa-miR-6774-3p MIMAT0027449 85932767 0.00010279957509508961 0.0 0.0 636
Expression level of miRNAs
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