EnhancerDB
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  3. vista23354[chr16:85903847-85903988]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23354[chr16:85903847-85903988]
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Tissue distribution of vista23354
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Transcription factor that possibly regulate vista23354[chr16:85903847-85903988]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85903841 85903851 SP1 JASPAR yes 12101467
chr16 85903841 85903851 SP1 JASPAR yes 49410489
chr16 85903848 85903859 FOXA1 JASPAR yes 12101468
chr16 85903848 85903859 FOXA1 JASPAR yes 49410490
chr16 85903848 85903869 IRF1 JASPAR yes 12101469
chr16 85903848 85903869 IRF1 JASPAR yes 49410491
chr16 85903851 85903865 SPI1 JASPAR yes 12101470
chr16 85903851 85903865 SPI1 JASPAR yes 49410492
chr16 85903864 85903870 TCF4 TRANSFAC yes 12101471
chr16 85903864 85903870 TCF4 TRANSFAC yes 49410493
chr16 85903885 85903890 TFAP2A TRANSFAC yes 12101472
chr16 85903885 85903890 TFAP2A TRANSFAC yes 49410494
chr16 85903885 85903891 MZF1 JASPAR yes 12101473
chr16 85903885 85903891 MZF1 JASPAR yes 49410495
chr16 85903918 85903923 SP1 TRANSFAC yes 12101474
chr16 85903918 85903923 SP1 TRANSFAC yes 49410496
chr16 85903926 85903947 ZNF263 JASPAR yes 12101475
chr16 85903926 85903947 ZNF263 JASPAR yes 49410497
chr16 85903931 85903936 ETS2 TRANSFAC yes 12101476
chr16 85903931 85903936 ETS2 TRANSFAC yes 49410498
chr16 85903933 85903941 EHF JASPAR yes 12101477
chr16 85903933 85903941 EHF JASPAR yes 49410499
chr16 85903935 85903942 SPIB JASPAR yes 12101478
chr16 85903935 85903942 SPIB JASPAR yes 49410500
chr16 85903970 85903973 MYB TRANSFAC yes 12101479
chr16 85903970 85903973 MYB TRANSFAC yes 49410501
chr16 85903980 85903991 ETV2 JASPAR yes 12101480
chr16 85903980 85903991 ETV2 JASPAR yes 49410502
SNP sites on vista23354[chr16:85903847-85903988]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85903854 rs533441400 G T
FOXA1 IRF1 SPI1
4629539
Genes possibly regulated by vista23354[chr16:85903847-85903988]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85805364 85833214 - EMC8 ENSG00000131148.4 85833214 0.67 1.0 15134 29367
chr16 85832239 85840650 + COX4I1 ENSG00000131143.4 85832239 0.68 1.0 15135 28392
chr16 85932409 85956215 + IRF8 ENSG00000140968.6 85932409 0.91 0.97 15136 71579
Expression level of Genes
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miRNAs possibly regulated by vista23354[chr16:85903847-85903988]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 85952002 85952022 + hsa-miR-6774-3p MIMAT0027449 85932767 0.00010397532318996292 0.0 0.0 636
Expression level of miRNAs
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