EnhancerDB
  1. Home
  2. Enhancers
  3. vista23370[chr16:85987194-85987452]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23370[chr16:85987194-85987452]
Back to top
Tissue distribution of vista23370
Back to top
Transcription factor that possibly regulate vista23370[chr16:85987194-85987452]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85987177 85987198 IRF1 JASPAR yes 12109952
chr16 85987177 85987198 IRF1 JASPAR yes 49411203
chr16 85987181 85987202 ZNF263 JASPAR yes 12109953
chr16 85987181 85987202 ZNF263 JASPAR yes 49411204
chr16 85987246 85987261 RUNX2 JASPAR yes 12109954
chr16 85987246 85987261 RUNX2 JASPAR yes 49411205
chr16 85987247 85987256 RUNX2 JASPAR yes 12109955
chr16 85987247 85987256 RUNX2 JASPAR yes 49411206
chr16 85987266 85987271 SP1 TRANSFAC yes 12109956
chr16 85987266 85987271 SP1 TRANSFAC yes 49411207
chr16 85987270 85987275 SP1 TRANSFAC yes 12109957
chr16 85987270 85987275 SP1 TRANSFAC yes 49411208
chr16 85987292 85987296 H4TF2 TRANSFAC yes 12109958
chr16 85987292 85987296 H4TF2 TRANSFAC yes 49411209
chr16 85987294 85987300 MZF1 JASPAR yes 12109959
chr16 85987294 85987300 MZF1 JASPAR yes 49411210
chr16 85987326 85987335 SP1 TRANSFAC yes 12109960
chr16 85987326 85987335 SP1 TRANSFAC yes 49411211
chr16 85987327 85987347 RREB1 JASPAR yes 12109961
chr16 85987327 85987347 RREB1 JASPAR yes 49411212
chr16 85987342 85987347 MYC TRANSFAC yes 12109962
chr16 85987342 85987347 MYC TRANSFAC yes 49411213
chr16 85987355 85987370 STAT2 JASPAR yes 12109963
chr16 85987355 85987370 STAT2 JASPAR yes 49411214
chr16 85987356 85987370 STAT1 JASPAR yes 12109964
chr16 85987356 85987370 STAT1 JASPAR yes 49411215
chr16 85987367 85987371 YY1 TRANSFAC yes 12109965
chr16 85987367 85987371 YY1 TRANSFAC yes 49411216
chr16 85987368 85987378 HOXB13 JASPAR yes 12109966
chr16 85987368 85987378 HOXD13 JASPAR yes 12109967
chr16 85987368 85987378 HOXB13 JASPAR yes 49411217
chr16 85987368 85987378 HOXD13 JASPAR yes 49411218
chr16 85987369 85987379 GSX2 JASPAR yes 12109968
chr16 85987369 85987379 GSX2 JASPAR yes 49411219
chr16 85987370 85987378 BSX JASPAR yes 12109969
chr16 85987370 85987378 BSX JASPAR yes 49411220
chr16 85987374 85987389 SCRT1 JASPAR yes 12109970
chr16 85987374 85987389 SCRT1 JASPAR yes 49411221
chr16 85987376 85987389 SCRT2 JASPAR yes 12109971
chr16 85987376 85987389 SCRT2 JASPAR yes 49411222
chr16 85987378 85987384 PTF TRANSFAC yes 12109972
chr16 85987378 85987384 PTF TRANSFAC yes 49411223
chr16 85987399 85987411 NHLH1 JASPAR yes 12109973
chr16 85987399 85987411 NHLH1 JASPAR yes 49411224
chr16 85987407 85987422 AR JASPAR yes 12109974
chr16 85987407 85987422 AR JASPAR yes 49411225
chr16 85987411 85987426 ZIC3 JASPAR yes 12109975
chr16 85987411 85987426 ZIC3 JASPAR yes 49411226
chr16 85987421 85987433 FOXI1 JASPAR yes 12109976
chr16 85987421 85987433 FOXI1 JASPAR yes 49411227
chr16 85987434 85987437 MYB TRANSFAC yes 12109977
chr16 85987434 85987437 MYB TRANSFAC yes 49411228
SNP sites on vista23370[chr16:85987194-85987452]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85987242 rs149142779 A G no 4630952
chr16 85987275 rs543829707 C A
SP1
4630953
chr16 85987296 rs59120392 C T
H4TF2 MZF1
4630954
chr16 85987382 rs558413339 T G
PTF SCRT1 SCRT2
4630955
Genes possibly regulated by vista23370[chr16:85987194-85987452]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85932409 85956215 + IRF8 ENSG00000140968.6 85932409 0.91 0.97 15136 45215
Expression level of Genes
Back to top
miRNAs possibly regulated by vista23370[chr16:85987194-85987452]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results