EnhancerDB
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  3. vista23393[chr16:86499961-86500190]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23393[chr16:86499961-86500190]
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Tissue distribution of vista23393
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Transcription factor that possibly regulate vista23393[chr16:86499961-86500190]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 86499955 86499969 POU1F1 JASPAR yes 12145159
chr16 86499955 86499969 POU1F1 JASPAR yes 49412345
chr16 86499956 86499968 POU3F1 JASPAR yes 12145160
chr16 86499956 86499968 POU3F2 JASPAR yes 12145161
chr16 86499956 86499968 POU3F1 JASPAR yes 49412346
chr16 86499956 86499968 POU3F2 JASPAR yes 49412347
chr16 86499956 86499969 POU3F3 JASPAR yes 12145162
chr16 86499956 86499969 POU3F3 JASPAR yes 49412348
chr16 86499957 86499961 YY1 TRANSFAC yes 12145163
chr16 86499957 86499961 YY1 TRANSFAC yes 49412349
chr16 86499963 86499967 YY1 TRANSFAC yes 12145164
chr16 86499963 86499967 YY1 TRANSFAC yes 49412350
chr16 86499974 86499979 TFAP2A TRANSFAC yes 12145165
chr16 86499974 86499979 TFAP2A TRANSFAC yes 49412351
chr16 86499974 86499980 MZF1 JASPAR yes 12145166
chr16 86499974 86499980 MZF1 JASPAR yes 49412352
chr16 86499987 86500002 PRDM1 JASPAR yes 12145167
chr16 86499987 86500002 PRDM1 JASPAR yes 49412353
chr16 86499999 86500019 RREB1 JASPAR yes 12145168
chr16 86499999 86500019 RREB1 JASPAR yes 49412354
chr16 86500001 86500016 FOXA1 JASPAR yes 12145169
chr16 86500001 86500016 FOXA1 JASPAR yes 49412355
chr16 86500002 86500008 TCF4 TRANSFAC yes 12145170
chr16 86500002 86500008 TCF4 TRANSFAC yes 49412356
chr16 86500002 86500014 FOXI1 JASPAR yes 12145171
chr16 86500002 86500014 FOXI1 JASPAR yes 49412357
chr16 86500002 86500017 FOXP1 JASPAR yes 12145172
chr16 86500002 86500017 FOXP1 JASPAR yes 49412358
chr16 86500003 86500015 FOXC2 JASPAR yes 12145173
chr16 86500003 86500015 FOXC2 JASPAR yes 49412359
chr16 86500004 86500024 RREB1 JASPAR yes 12145174
chr16 86500004 86500024 RREB1 JASPAR yes 49412360
chr16 86500005 86500016 FOXA1 JASPAR yes 12145175
chr16 86500005 86500016 FOXA1 JASPAR yes 49412361
chr16 86500005 86500026 IRF1 JASPAR yes 12145176
chr16 86500005 86500026 IRF1 JASPAR yes 49412362
chr16 86500006 86500021 FOXP1 JASPAR yes 12145177
chr16 86500006 86500021 FOXP1 JASPAR yes 49412363
chr16 86500009 86500021 IRF1 JASPAR yes 12145178
chr16 86500009 86500021 IRF1 JASPAR yes 49412364
chr16 86500010 86500031 IRF1 JASPAR yes 12145179
chr16 86500010 86500031 IRF1 JASPAR yes 49412365
chr16 86500011 86500017 TCF4 TRANSFAC yes 12145180
chr16 86500011 86500017 TCF4 TRANSFAC yes 49412366
chr16 86500011 86500026 FOXP1 JASPAR yes 12145181
chr16 86500011 86500026 FOXP1 JASPAR yes 49412367
chr16 86500012 86500027 STAT2 JASPAR yes 12145182
chr16 86500012 86500027 STAT2 JASPAR yes 49412368
chr16 86500013 86500027 STAT1 JASPAR yes 12145183
chr16 86500013 86500027 STAT1 JASPAR yes 49412369
chr16 86500016 86500022 TCF4 TRANSFAC yes 12145184
chr16 86500016 86500022 TCF4 TRANSFAC yes 49412370
chr16 86500017 86500029 FOXC2 JASPAR yes 12145185
chr16 86500017 86500029 FOXC2 JASPAR yes 49412371
chr16 86500022 86500027 ETS2 TRANSFAC yes 12145186
chr16 86500022 86500027 ETS2 TRANSFAC yes 49412372
chr16 86500028 86500035 NKX3-1 JASPAR yes 12145187
chr16 86500028 86500035 NKX3-1 JASPAR yes 49412373
chr16 86500037 86500042 GATA2 JASPAR yes 12145188
chr16 86500037 86500042 GATA2 JASPAR yes 49412374
chr16 86500040 86500051 ESRRA JASPAR yes 12145189
chr16 86500040 86500051 ESRRA JASPAR yes 49412375
chr16 86500059 86500065 SOX10 JASPAR yes 12145190
chr16 86500059 86500065 SOX10 JASPAR yes 49412376
chr16 86500074 86500079 H4TF1 TRANSFAC yes 12145191
chr16 86500074 86500079 H4TF1 TRANSFAC yes 49412377
chr16 86500088 86500092 NFE TRANSFAC yes 12145192
chr16 86500088 86500092 NFE TRANSFAC yes 49412378
chr16 86500099 86500109 NKX2-3 JASPAR yes 12145193
chr16 86500099 86500109 NKX2-3 JASPAR yes 49412379
chr16 86500100 86500109 NKX2-8 JASPAR yes 12145194
chr16 86500100 86500109 NKX2-8 JASPAR yes 49412380
chr16 86500115 86500119 YY1 TRANSFAC yes 12145195
chr16 86500115 86500119 YY1 TRANSFAC yes 49412381
chr16 86500137 86500140 MYB TRANSFAC yes 12145196
chr16 86500137 86500140 MYB TRANSFAC yes 49412382
chr16 86500146 86500167 ZNF263 JASPAR yes 12145197
chr16 86500146 86500167 ZNF263 JASPAR yes 49412383
chr16 86500149 86500157 EHF JASPAR yes 12145198
chr16 86500149 86500157 EHF JASPAR yes 49412384
SNP sites on vista23393[chr16:86499961-86500190]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 86499992 rs61688881 G A
PRDM1
4637634
chr16 86500063 rs142063559 T C
SOX10
4637635
chr16 86500081 rs74772556 A G no 4637636
Genes possibly regulated by vista23393[chr16:86499961-86500190]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 86544133 86548076 + FOXF1 ENSG00000103241.5 86544133 0.89 1.0 15137 56057
chr16 86563782 86588841 - MTHFSD ENSG00000103248.13 86588841 0.71 1.0 15138 11349
Expression level of Genes
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miRNAs possibly regulated by vista23393[chr16:86499961-86500190]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results