EnhancerDB
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  3. vista23398[chr16:86609499-86609840]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23398[chr16:86609499-86609840]
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Tissue distribution of vista23398
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Transcription factor that possibly regulate vista23398[chr16:86609499-86609840]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 86609272 86609649 CTCF UCSC Txn Factor no Conserved 108218408
chr16 86609317 86612341 POLR2A UCSC Txn Factor no Conserved 108218416
chr16 86609331 86609616 SMC3 UCSC Txn Factor no Conserved 108218419
chr16 86609353 86609618 RAD21 UCSC Txn Factor no Conserved 108218426
chr16 86609515 86609530 STAT1 JASPAR yes 12148205
chr16 86609515 86609530 STAT1 JASPAR yes 49412553
chr16 86609518 86609530 EHF JASPAR yes 12148206
chr16 86609518 86609530 ELF1 JASPAR yes 12148207
chr16 86609518 86609530 ELF4 JASPAR yes 12148208
chr16 86609518 86609530 EHF JASPAR yes 49412554
chr16 86609518 86609530 ELF1 JASPAR yes 49412555
chr16 86609518 86609530 ELF4 JASPAR yes 49412556
chr16 86609518 86609531 ELF3 JASPAR yes 12148209
chr16 86609518 86609531 ELF3 JASPAR yes 49412557
chr16 86609520 86609529 ELK4 JASPAR yes 12148210
chr16 86609520 86609529 ELK4 JASPAR yes 49412558
chr16 86609520 86609530 ELK3 JASPAR yes 12148211
chr16 86609520 86609530 ETS1 JASPAR yes 12148212
chr16 86609520 86609530 ETV3 JASPAR yes 12148213
chr16 86609520 86609530 ETV4 JASPAR yes 12148214
chr16 86609520 86609530 ETV6 JASPAR yes 12148215
chr16 86609520 86609530 FEV JASPAR yes 12148216
chr16 86609520 86609530 FLI1 JASPAR yes 12148217
chr16 86609520 86609530 ELK3 JASPAR yes 49412559
chr16 86609520 86609530 ETS1 JASPAR yes 49412560
chr16 86609520 86609530 ETV3 JASPAR yes 49412561
chr16 86609520 86609530 ETV4 JASPAR yes 49412562
chr16 86609520 86609530 ETV6 JASPAR yes 49412563
chr16 86609520 86609530 FEV JASPAR yes 49412564
chr16 86609520 86609530 FLI1 JASPAR yes 49412565
chr16 86609521 86609529 FEV JASPAR yes 12148218
chr16 86609521 86609529 FEV JASPAR yes 49412566
chr16 86609522 86609528 ETS1 JASPAR yes 12148219
chr16 86609522 86609528 ETS1 JASPAR yes 49412567
chr16 86609526 86609538 POU2F1 JASPAR yes 12148220
chr16 86609526 86609538 POU2F1 JASPAR yes 49412568
chr16 86609526 86609539 POU3F3 JASPAR yes 12148221
chr16 86609526 86609539 POU3F3 JASPAR yes 49412569
chr16 86609526 86609540 POU1F1 JASPAR yes 12148222
chr16 86609526 86609540 POU1F1 JASPAR yes 49412570
chr16 86609527 86609539 POU3F1 JASPAR yes 12148223
chr16 86609527 86609539 POU3F2 JASPAR yes 12148224
chr16 86609527 86609539 POU3F1 JASPAR yes 49412571
chr16 86609527 86609539 POU3F2 JASPAR yes 49412572
chr16 86609528 86609537 POU3F4 JASPAR yes 12148225
chr16 86609528 86609537 POU5F1B JASPAR yes 12148226
chr16 86609528 86609537 POU3F4 JASPAR yes 49412573
chr16 86609528 86609537 POU5F1B JASPAR yes 49412574
chr16 86609528 86609538 NFATC3 JASPAR yes 12148227
chr16 86609528 86609538 NFATC3 JASPAR yes 49412575
chr16 86609552 86609557 ETS2 TRANSFAC yes 12148228
chr16 86609552 86609557 ETS2 TRANSFAC yes 49412576
chr16 86609559 86609562 MYB TRANSFAC yes 12148229
chr16 86609559 86609562 MYB TRANSFAC yes 49412577
chr16 86609568 86609574 SP1 TRANSFAC yes 12148230
chr16 86609568 86609574 SP1 TRANSFAC yes 49412578
chr16 86609588 86609603 MAFK JASPAR yes 12148231
chr16 86609588 86609603 MAFK JASPAR yes 49412579
chr16 86609681 86609696 HNF4G JASPAR yes 12148232
chr16 86609681 86609696 HNF4G JASPAR yes 49412580
chr16 86609686 86609700 MTF1 JASPAR yes 12148233
chr16 86609686 86609700 MTF1 JASPAR yes 49412581
chr16 86609709 86609719 SP1 JASPAR yes 12148234
chr16 86609709 86609719 SP1 JASPAR yes 49412582
chr16 86609729 86609738 RUNX2 JASPAR yes 12148235
chr16 86609729 86609738 RUNX2 JASPAR yes 49412583
chr16 86609744 86609753 HIC2 JASPAR yes 12148236
chr16 86609744 86609753 HIC2 JASPAR yes 49412584
chr16 86609747 86609751 LFA1 TRANSFAC yes 12148237
chr16 86609747 86609751 LFA1 TRANSFAC yes 49412585
chr16 86609748 86609758 NEUROG2 JASPAR yes 12148238
chr16 86609748 86609758 NEUROG2 JASPAR yes 49412586
chr16 86609750 86609754 YY1 TRANSFAC yes 12148239
chr16 86609750 86609754 YY1 TRANSFAC yes 49412587
chr16 86609751 86609766 FOXP1 JASPAR yes 12148240
chr16 86609751 86609766 FOXP1 JASPAR yes 49412588
chr16 86609751 86609771 RREB1 JASPAR yes 12148241
chr16 86609751 86609771 RREB1 JASPAR yes 49412589
chr16 86609753 86609773 RREB1 JASPAR yes 12148242
chr16 86609753 86609773 RREB1 JASPAR yes 49412590
chr16 86609754 86609774 RREB1 JASPAR yes 12148243
chr16 86609754 86609774 RREB1 JASPAR yes 49412591
chr16 86609758 86609764 TCF4 TRANSFAC yes 12148244
chr16 86609758 86609764 TCF4 TRANSFAC yes 49412592
chr16 86609758 86609773 FOXP1 JASPAR yes 12148245
chr16 86609758 86609773 FOXP1 JASPAR yes 49412593
chr16 86609759 86609780 IRF1 JASPAR yes 12148246
chr16 86609759 86609780 IRF1 JASPAR yes 49412594
chr16 86609760 86609775 RUNX2 JASPAR yes 12148247
chr16 86609760 86609775 RUNX2 JASPAR yes 49412595
chr16 86609763 86609777 ONECUT3 JASPAR yes 12148248
chr16 86609763 86609777 ONECUT3 JASPAR yes 49412596
chr16 86609765 86609786 IRF1 JASPAR yes 12148249
chr16 86609765 86609786 IRF1 JASPAR yes 49412597
chr16 86609786 86609796 GSC JASPAR yes 12148250
chr16 86609786 86609796 GSC JASPAR yes 49412598
chr16 86609798 86609802 NFE TRANSFAC yes 12148251
chr16 86609798 86609802 NFE TRANSFAC yes 49412599
chr16 86609807 86609828 IRF1 JASPAR yes 12148252
chr16 86609807 86609828 IRF1 JASPAR yes 49412600
chr16 86609809 86609824 PRDM1 JASPAR yes 12148253
chr16 86609809 86609824 PRDM1 JASPAR yes 49412601
chr16 86609811 86609832 IRF1 JASPAR yes 12148254
chr16 86609811 86609832 IRF1 JASPAR yes 49412602
chr16 86609812 86609827 FOXP1 JASPAR yes 12148255
chr16 86609812 86609827 FOXP1 JASPAR yes 49412603
chr16 86609812 86609833 IRF1 JASPAR yes 12148256
chr16 86609812 86609833 IRF1 JASPAR yes 49412604
chr16 86609813 86609828 STAT2 JASPAR yes 12148257
chr16 86609813 86609828 STAT2 JASPAR yes 49412605
chr16 86609813 86609834 IRF1 JASPAR yes 12148258
chr16 86609813 86609834 IRF1 JASPAR yes 49412606
chr16 86609814 86609829 FOXP1 JASPAR yes 12148259
chr16 86609814 86609829 FOXP1 JASPAR yes 49412607
chr16 86609814 86609835 IRF1 JASPAR yes 12148260
chr16 86609814 86609835 IRF1 JASPAR yes 49412608
chr16 86609815 86609836 IRF1 JASPAR yes 12148261
chr16 86609815 86609836 IRF1 JASPAR yes 49412609
chr16 86609816 86609831 FOXP1 JASPAR yes 12148262
chr16 86609816 86609831 FOXP1 JASPAR yes 49412610
chr16 86609816 86609837 IRF1 JASPAR yes 12148263
chr16 86609816 86609837 IRF1 JASPAR yes 49412611
chr16 86609817 86609832 FOXP1 JASPAR yes 12148264
chr16 86609817 86609832 FOXP1 JASPAR yes 49412612
chr16 86609817 86609838 IRF1 JASPAR yes 12148265
chr16 86609817 86609838 IRF1 JASPAR yes 49412613
chr16 86609818 86609833 FOXP1 JASPAR yes 12148266
chr16 86609818 86609833 FOXP1 JASPAR yes 49412614
chr16 86609819 86609834 FOXP1 JASPAR yes 12148267
chr16 86609819 86609834 FOXP1 JASPAR yes 49412615
chr16 86609820 86609835 FOXP1 JASPAR yes 12148268
chr16 86609820 86609835 FOXP1 JASPAR yes 49412616
chr16 86609820 86609841 IRF1 JASPAR yes 12148269
chr16 86609820 86609841 IRF1 JASPAR yes 49412617
chr16 86609821 86609836 FOXP1 JASPAR yes 12148270
chr16 86609821 86609836 FOXP1 JASPAR yes 49412618
chr16 86609821 86609842 IRF1 JASPAR yes 12148271
chr16 86609821 86609842 IRF1 JASPAR yes 49412619
chr16 86609822 86609837 FOXP1 JASPAR yes 12148272
chr16 86609822 86609837 FOXP1 JASPAR yes 49412620
chr16 86609823 86609838 FOXP1 JASPAR yes 12148273
chr16 86609823 86609838 FOXP1 JASPAR yes 49412621
chr16 86609824 86609839 FOXP1 JASPAR yes 12148274
chr16 86609824 86609839 FOXP1 JASPAR yes 49412622
SNP sites on vista23398[chr16:86609499-86609840]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 86609570 rs12445561 C G
CTCF POLR2A RAD21 SMC3 SP1
4638821
chr16 86609658 rs12445412 G C
POLR2A
4638822
chr16 86609695 rs150204897 CT C
HNF4G MTF1 POLR2A
4638823
chr16 86609812 rs4843169 G T
FOXP1 IRF1 POLR2A PRDM1
4638824
chr16 86609817 rs551934045 CTTTT C
FOXP1 IRF1 POLR2A PRDM1 STAT2
4638825
chr16 86609817 rs780511081 CTTTT C
FOXP1 IRF1 POLR2A PRDM1 STAT2
4638826
Genes possibly regulated by vista23398[chr16:86609499-86609840]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 86544133 86548076 + FOXF1 ENSG00000103241.5 86544133 0.89 1.0 15137 34634
chr16 86563782 86588841 - MTHFSD ENSG00000103248.13 86588841 0.71 1.0 15138 79342
chr16 86600857 86602539 + FOXC2 ENSG00000176692.4 86600857 0.98 0.97 15139 91358
chr16 86609974 86615303 + FOXL1 ENSG00000176678.4 86609974 0.95 0.99 15140 99866
Expression level of Genes
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miRNAs possibly regulated by vista23398[chr16:86609499-86609840]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results