EnhancerDB
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  3. vista23424[chr16:87378207-87378359]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23424[chr16:87378207-87378359]
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Tissue distribution of vista23424
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Transcription factor that possibly regulate vista23424[chr16:87378207-87378359]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87378207 87378222 PRDM1 JASPAR yes 49413914
chr16 87378213 87378219 MZF1 JASPAR yes 49413915
chr16 87378215 87378225 EN2 JASPAR yes 49413916
chr16 87378215 87378225 ESX1 JASPAR yes 49413917
chr16 87378215 87378225 GBX1 JASPAR yes 49413918
chr16 87378215 87378225 LBX2 JASPAR yes 49413919
chr16 87378216 87378220 H1TF2 TRANSFAC yes 49413920
chr16 87378216 87378220 NFE TRANSFAC yes 49413921
chr16 87378216 87378220 SRF TRANSFAC yes 49413922
chr16 87378216 87378224 DLX6 JASPAR yes 49413923
chr16 87378216 87378224 MSX2 JASPAR yes 49413924
chr16 87378221 87378226 GATA2 JASPAR yes 49413925
chr16 87378222 87378228 ZNF354C JASPAR yes 49413926
chr16 87378227 87378247 RREB1 JASPAR yes 49413927
chr16 87378228 87378248 RREB1 JASPAR yes 49413928
chr16 87378229 87378249 RREB1 JASPAR yes 49413929
chr16 87378232 87378238 TCF4 TRANSFAC yes 49413930
chr16 87378232 87378247 FOXP1 JASPAR yes 49413931
chr16 87378241 87378262 IRF1 JASPAR yes 49413932
chr16 87378243 87378258 STAT2 JASPAR yes 49413933
chr16 87378250 87378265 FOXP1 JASPAR yes 49413934
chr16 87378262 87378273 FOSL1 JASPAR yes 49413935
chr16 87378262 87378273 JUND JASPAR yes 49413936
chr16 87378263 87378274 JUNB JASPAR yes 49413937
chr16 87378263 87378277 JUN JASPAR yes 49413938
chr16 87378271 87378280 THAP1 JASPAR yes 49413939
chr16 87378278 87378285 NKX3-1 JASPAR yes 49413940
chr16 87378282 87378291 SRY JASPAR yes 49413941
chr16 87378282 87378293 PHOX2A JASPAR yes 49413942
chr16 87378282 87378293 PROP1 JASPAR yes 49413943
chr16 87378293 87378303 SP1 JASPAR yes 49413944
chr16 87378294 87378302 EHF JASPAR yes 49413945
chr16 87378308 87378322 STAT1 JASPAR yes 49413946
chr16 87378308 87378323 PRDM1 JASPAR yes 49413947
chr16 87378308 87378323 STAT2 JASPAR yes 49413948
chr16 87378312 87378317 ETS2 TRANSFAC yes 49413949
SNP sites on vista23424[chr16:87378207-87378359]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87378214 rs62053080 T G
MZF1 PRDM1
4649116
chr16 87378215 rs185636036 C T
EN2 ESX1 GBX1 LBX2 MZF1 PRDM1
4649117
chr16 87378230 rs149245682 G A
RREB1
4649118
chr16 87378346 rs139408400 G A no 4649119
chr16 87378359 rs190396908 A C no 4649120
Genes possibly regulated by vista23424[chr16:87378207-87378359]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87117168 87351022 - C16orf95 ENSG00000260456.2 87351022 0.91 0.99 15141 72815
chr16 87336482 87367879 - RP11-178L8.4 ENSG00000131152.4 87367879 0.86 0.78 15142 89672
chr16 87360593 87425748 - FBXO31 ENSG00000103264.11 87425748 0.64 1.0 15143 52611
chr16 87417601 87438385 + MAP1LC3B ENSG00000140941.8 87417601 0.61 1.0 15144 60758
Expression level of Genes
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miRNAs possibly regulated by vista23424[chr16:87378207-87378359]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results