EnhancerDB
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  3. vista23435[chr16:87714317-87714490]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23435[chr16:87714317-87714490]
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Tissue distribution of vista23435
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Transcription factor that possibly regulate vista23435[chr16:87714317-87714490]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87714342 87714346 YY1 TRANSFAC yes 49414285
chr16 87714342 87714352 HOXC10 JASPAR yes 49414286
chr16 87714342 87714353 HOXC11 JASPAR yes 49414287
chr16 87714343 87714352 CDX1 JASPAR yes 49414288
chr16 87714371 87714382 NFKB1 JASPAR yes 49414289
chr16 87714377 87714387 SP1 JASPAR yes 49414290
chr16 87714388 87714393 ATF1 TRANSFAC yes 49414291
chr16 87714403 87714408 NFY TRANSFAC yes 49414292
chr16 87714407 87714421 IRF7 JASPAR yes 49414293
chr16 87714409 87714424 MEF2C JASPAR yes 49414294
chr16 87714412 87714416 YY1 TRANSFAC yes 49414295
chr16 87714425 87714439 CREB3L1 JASPAR yes 49414296
chr16 87714446 87714456 TBX21 JASPAR yes 49414297
chr16 87714446 87714457 TBX20 JASPAR yes 49414298
chr16 87714446 87714457 TBX2 JASPAR yes 49414299
chr16 87714446 87714459 EOMES JASPAR yes 49414300
chr16 87714447 87714455 MGA JASPAR yes 49414301
chr16 87714447 87714455 TBX1 JASPAR yes 49414302
chr16 87714447 87714457 TBR1 JASPAR yes 49414303
chr16 87714460 87714475 FOXP1 JASPAR yes 49414304
chr16 87714461 87714472 FOXA1 JASPAR yes 49414305
chr16 87714461 87714476 FOXA1 JASPAR yes 49414306
chr16 87714462 87714470 FOXL1 JASPAR yes 49414307
chr16 87714462 87714473 FOXB1 JASPAR yes 49414308
chr16 87714462 87714473 FOXC1 JASPAR yes 49414309
chr16 87714462 87714474 FOXC2 JASPAR yes 49414310
chr16 87714463 87714474 FOXP2 JASPAR yes 49414311
chr16 87714464 87714472 FOXO3 JASPAR yes 49414312
chr16 87714465 87714472 FOXD2 JASPAR yes 49414313
chr16 87714465 87714472 FOXI1 JASPAR yes 49414314
chr16 87714465 87714472 FOXL1 JASPAR yes 49414315
chr16 87714465 87714472 FOXO4 JASPAR yes 49414316
chr16 87714465 87714472 FOXO6 JASPAR yes 49414317
chr16 87714465 87714472 FOXP3 JASPAR yes 49414318
chr16 87714465 87714473 FOXD1 JASPAR yes 49414319
chr16 87714465 87714473 FOXG1 JASPAR yes 49414320
chr16 87714465 87714473 FOXO3 JASPAR yes 49414321
chr16 87714467 87714473 HiNF-A TRANSFAC yes 49414322
SNP sites on vista23435[chr16:87714317-87714490]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87714357 rs115751247 C T no 4652786
chr16 87714450 rs370749302 G A
EOMES MGA TBR1 TBX1 TBX2 TBX20 TBX21
4652787
chr16 87714459 rs141245236 T G
EOMES
4652788
chr16 87714475 rs150780348 C T
FOXA1 FOXP1
4652789
Genes possibly regulated by vista23435[chr16:87714317-87714490]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87635441 87731762 + JPH3 ENSG00000154118.8 87635441 0.82 0.99 15146 21124
chr16 87727144 87729753 - AC010536.1 ENSG00000226180.2 87729753 0.72 1.0 15147 84737
chr16 87730091 87799598 - KLHDC4 ENSG00000104731.9 87799598 0.72 1.0 15148 14892
chr16 87731749 87739290 - FLJ00104 ENSG00000205047.3 87739290 0.7 1.0 15149 75200
Expression level of Genes
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miRNAs possibly regulated by vista23435[chr16:87714317-87714490]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results