EnhancerDB
  1. Home
  2. Enhancers
  3. vista23441[chr16:87780321-87780693]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23441[chr16:87780321-87780693]
Back to top
Tissue distribution of vista23441
Back to top
Transcription factor that possibly regulate vista23441[chr16:87780321-87780693]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87780311 87780326 AR JASPAR yes 12236425
chr16 87780311 87780326 AR JASPAR yes 49414613
chr16 87780311 87780328 NR3C1 JASPAR yes 12236426
chr16 87780311 87780328 NR3C1 JASPAR yes 49414614
chr16 87780311 87780329 ESR2 JASPAR yes 12236427
chr16 87780311 87780329 ESR2 JASPAR yes 49414615
chr16 87780316 87780332 SOX4 JASPAR yes 12236428
chr16 87780316 87780332 SOX4 JASPAR yes 49414616
chr16 87780321 87780331 RORA JASPAR yes 12236429
chr16 87780321 87780331 RORA JASPAR yes 49414617
chr16 87780332 87780338 NFE2 TRANSFAC yes 12236430
chr16 87780332 87780338 NFE2 TRANSFAC yes 49414618
chr16 87780365 87780370 SP1 TRANSFAC yes 12236431
chr16 87780365 87780370 SP1 TRANSFAC yes 49414619
chr16 87780406 87780416 HOXA13 JASPAR yes 12236432
chr16 87780406 87780416 HOXA13 JASPAR yes 49414620
chr16 87780410 87780416 TBP TRANSFAC yes 12236433
chr16 87780410 87780416 TBP TRANSFAC yes 49414621
chr16 87780445 87780457 GRHL1 JASPAR yes 12236434
chr16 87780445 87780457 GRHL1 JASPAR yes 49414622
chr16 87780460 87780470 HOXD13 JASPAR yes 12236435
chr16 87780460 87780470 HOXD13 JASPAR yes 49414623
chr16 87780460 87780471 HOXA10 JASPAR yes 12236436
chr16 87780460 87780471 HOXA10 JASPAR yes 49414624
chr16 87780461 87780471 ALX3 JASPAR yes 12236437
chr16 87780461 87780471 EMX1 JASPAR yes 12236438
chr16 87780461 87780471 EMX2 JASPAR yes 12236439
chr16 87780461 87780471 EVX2 JASPAR yes 12236440
chr16 87780461 87780471 GSX2 JASPAR yes 12236441
chr16 87780461 87780471 HOXB2 JASPAR yes 12236442
chr16 87780461 87780471 HOXB3 JASPAR yes 12236443
chr16 87780461 87780471 MEOX1 JASPAR yes 12236444
chr16 87780461 87780471 MEOX2 JASPAR yes 12236445
chr16 87780461 87780471 MIXL1 JASPAR yes 12236446
chr16 87780461 87780471 MNX1 JASPAR yes 12236447
chr16 87780461 87780471 RAX JASPAR yes 12236448
chr16 87780461 87780471 ALX3 JASPAR yes 49414625
chr16 87780461 87780471 EMX1 JASPAR yes 49414626
chr16 87780461 87780471 EMX2 JASPAR yes 49414627
chr16 87780461 87780471 EVX2 JASPAR yes 49414628
chr16 87780461 87780471 GSX2 JASPAR yes 49414629
chr16 87780461 87780471 HOXB2 JASPAR yes 49414630
chr16 87780461 87780471 HOXB3 JASPAR yes 49414631
chr16 87780461 87780471 MEOX1 JASPAR yes 49414632
chr16 87780461 87780471 MEOX2 JASPAR yes 49414633
chr16 87780461 87780471 MIXL1 JASPAR yes 49414634
chr16 87780461 87780471 MNX1 JASPAR yes 49414635
chr16 87780461 87780471 RAX JASPAR yes 49414636
chr16 87780462 87780470 LMX1A JASPAR yes 12236449
chr16 87780462 87780470 LMX1B JASPAR yes 12236450
chr16 87780462 87780470 NKX6-1 JASPAR yes 12236451
chr16 87780462 87780470 NKX6-2 JASPAR yes 12236452
chr16 87780462 87780470 PDX1 JASPAR yes 12236453
chr16 87780462 87780470 VAX1 JASPAR yes 12236454
chr16 87780462 87780470 VAX2 JASPAR yes 12236455
chr16 87780462 87780470 VSX1 JASPAR yes 12236456
chr16 87780462 87780470 LMX1A JASPAR yes 49414637
chr16 87780462 87780470 LMX1B JASPAR yes 49414638
chr16 87780462 87780470 NKX6-1 JASPAR yes 49414639
chr16 87780462 87780470 NKX6-2 JASPAR yes 49414640
chr16 87780462 87780470 PDX1 JASPAR yes 49414641
chr16 87780462 87780470 VAX1 JASPAR yes 49414642
chr16 87780462 87780470 VAX2 JASPAR yes 49414643
chr16 87780462 87780470 VSX1 JASPAR yes 49414644
chr16 87780462 87780476 POU1F1 JASPAR yes 12236457
chr16 87780462 87780476 POU1F1 JASPAR yes 49414645
chr16 87780463 87780475 POU3F1 JASPAR yes 12236458
chr16 87780463 87780475 POU3F2 JASPAR yes 12236459
chr16 87780463 87780475 POU3F1 JASPAR yes 49414646
chr16 87780463 87780475 POU3F2 JASPAR yes 49414647
chr16 87780463 87780476 POU3F3 JASPAR yes 12236460
chr16 87780463 87780476 POU3F3 JASPAR yes 49414648
chr16 87780470 87780474 YY1 TRANSFAC yes 12236461
chr16 87780470 87780474 YY1 TRANSFAC yes 49414649
chr16 87780478 87780495 BCL6B JASPAR yes 12236462
chr16 87780478 87780495 BCL6B JASPAR yes 49414650
chr16 87780498 87780509 FOXP2 JASPAR yes 12236463
chr16 87780498 87780509 FOXP2 JASPAR yes 49414651
chr16 87780498 87780512 FOXF2 JASPAR yes 12236464
chr16 87780498 87780512 FOXF2 JASPAR yes 49414652
chr16 87780513 87780534 REST JASPAR yes 12236465
chr16 87780513 87780534 REST JASPAR yes 49414653
chr16 87780524 87780528 LFA1 TRANSFAC yes 12236466
chr16 87780524 87780528 LFA1 TRANSFAC yes 49414654
chr16 87780524 87780536 PKNOX2 JASPAR yes 12236467
chr16 87780524 87780536 PKNOX2 JASPAR yes 49414655
chr16 87780525 87780535 NHLH1 JASPAR yes 12236468
chr16 87780525 87780535 NHLH1 JASPAR yes 49414656
chr16 87780540 87780547 E2F1 TRANSFAC yes 12236469
chr16 87780540 87780547 E2F1 TRANSFAC yes 49414657
chr16 87780604 87780610 YY1 JASPAR yes 12236470
chr16 87780604 87780610 YY1 JASPAR yes 49414658
chr16 87780609 87780621 NHLH1 JASPAR yes 12236471
chr16 87780609 87780621 NHLH1 JASPAR yes 49414659
chr16 87780610 87780620 NHLH1 JASPAR yes 12236472
chr16 87780610 87780620 NHLH1 JASPAR yes 49414660
chr16 87780620 87780631 EBF1 JASPAR yes 12236473
chr16 87780620 87780631 EBF1 JASPAR yes 49414661
chr16 87780631 87780636 SP1 TRANSFAC yes 12236474
chr16 87780631 87780636 SP1 TRANSFAC yes 49414662
chr16 87780631 87780649 ESR1 JASPAR yes 12236475
chr16 87780631 87780649 ESR1 JASPAR yes 49414663
chr16 87780661 87780677 ZNF143 JASPAR yes 12236476
chr16 87780661 87780677 ZNF143 JASPAR yes 49414664
chr16 87780679 87780693 EBF1 JASPAR yes 12236477
chr16 87780679 87780693 EBF1 JASPAR yes 49414665
SNP sites on vista23441[chr16:87780321-87780693]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87780467 rs146755439 T C,G
ALX3 EMX1 EMX2 EVX2 GSX2 HOXA10 HOXB2 HOXB3 HOXD13 LMX1A LMX1B MEOX1 MEOX2 MIXL1 MNX1 NKX6-1 NKX6-2 PDX1 POU1F1 POU3F1 POU3F2 POU3F3 RAX VAX1 VAX2 VSX1
4653530
chr16 87780501 rs746803 T C
FOXF2 FOXP2
4653531
chr16 87780552 rs77911757 C T no 4653532
chr16 87780621 rs140394293 G A
EBF1 NHLH1
4653533
chr16 87780650 rs541796700 A G no 4653534
chr16 87780653 rs76470261 G A no 4653535
Genes possibly regulated by vista23441[chr16:87780321-87780693]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87727144 87729753 - AC010536.1 ENSG00000226180.2 87729753 0.72 1.0 15147 49432
chr16 87730091 87799598 - KLHDC4 ENSG00000104731.9 87799598 0.72 1.0 15148 81095
chr16 87731749 87739290 - FLJ00104 ENSG00000205047.3 87739290 0.7 1.0 15149 58969
Expression level of Genes
Back to top
miRNAs possibly regulated by vista23441[chr16:87780321-87780693]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results