EnhancerDB
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  3. vista23445[chr16:87811234-87811383]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23445[chr16:87811234-87811383]
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Tissue distribution of vista23445
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Transcription factor that possibly regulate vista23445[chr16:87811234-87811383]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87811146 87811860 CTCF UCSC Txn Factor no Conserved 108219988
chr16 87811146 87811860 CTCF UCSC Txn Factor no Conserved 108219989
chr16 87811231 87811830 TCF7L2 UCSC Txn Factor no Conserved 108220010
chr16 87811231 87811830 TCF7L2 UCSC Txn Factor no Conserved 108220011
chr16 87811231 87811236 GATA2 JASPAR yes 12237919
chr16 87811231 87811236 GATA2 JASPAR yes 49414783
chr16 87811234 87811242 FOXL1 JASPAR yes 12237920
chr16 87811234 87811242 FOXL1 JASPAR yes 49414784
chr16 87811245 87811248 MYB TRANSFAC yes 12237921
chr16 87811245 87811248 MYB TRANSFAC yes 49414785
chr16 87811269 87811288 RFX2 JASPAR yes 12237922
chr16 87811269 87811288 RFX2 JASPAR yes 49414786
chr16 87811271 87811286 RFX5 JASPAR yes 12237923
chr16 87811271 87811286 RFX5 JASPAR yes 49414787
chr16 87811289 87811310 REST JASPAR yes 12237924
chr16 87811289 87811310 REST JASPAR yes 49414788
chr16 87811290 87811309 REST JASPAR yes 12237925
chr16 87811290 87811309 REST JASPAR yes 49414789
chr16 87811316 87811335 CTCF JASPAR yes 12237926
chr16 87811316 87811335 CTCF JASPAR yes 49414790
chr16 87811356 87811361 GATA2 JASPAR yes 12237927
chr16 87811356 87811361 GATA2 JASPAR yes 49414791
chr16 87811356 87811371 MEF2C JASPAR yes 12237928
chr16 87811356 87811371 MEF2C JASPAR yes 49414792
chr16 87811369 87811383 GLIS2 JASPAR yes 12237929
chr16 87811369 87811383 GLIS3 JASPAR yes 12237930
chr16 87811369 87811383 GLIS2 JASPAR yes 49414793
chr16 87811369 87811383 GLIS3 JASPAR yes 49414794
chr16 87811369 87811384 ZIC3 JASPAR yes 12237931
chr16 87811369 87811384 ZIC3 JASPAR yes 49414795
SNP sites on vista23445[chr16:87811234-87811383]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista23445[chr16:87811234-87811383]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87727144 87729753 - AC010536.1 ENSG00000226180.2 87729753 0.72 1.0 15147 18519
chr16 87730091 87799598 - KLHDC4 ENSG00000104731.9 87799598 0.72 1.0 15148 88364
chr16 87731749 87739290 - FLJ00104 ENSG00000205047.3 87739290 0.7 1.0 15149 28056
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 8289
Expression level of Genes
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miRNAs possibly regulated by vista23445[chr16:87811234-87811383]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 87868198 87868218 - hsa-miR-6775-3p MIMAT0027451 87903110 5.4468010937176594e-05 0.0 0.0 638
Expression level of miRNAs
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