EnhancerDB
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  3. vista23446[chr16:87811524-87811882]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23446[chr16:87811524-87811882]
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Tissue distribution of vista23446
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Transcription factor that possibly regulate vista23446[chr16:87811524-87811882]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87811146 87811860 CTCF UCSC Txn Factor no Conserved 108219988
chr16 87811146 87811860 CTCF UCSC Txn Factor no Conserved 108219989
chr16 87811231 87811830 TCF7L2 UCSC Txn Factor no Conserved 108220010
chr16 87811231 87811830 TCF7L2 UCSC Txn Factor no Conserved 108220011
chr16 87811453 87811889 MAX UCSC Txn Factor no Conserved 108220046
chr16 87811477 87811911 MYC UCSC Txn Factor no Conserved 108220055
chr16 87811498 87811882 USF1 UCSC Txn Factor no Conserved 108220060
chr16 87811522 87811844 SMC3 UCSC Txn Factor no Conserved 108220076
chr16 87811544 87811816 RAD21 UCSC Txn Factor no Conserved 108220092
chr16 87811515 87811535 PPARG JASPAR yes 12237958
chr16 87811515 87811535 PPARG JASPAR yes 49414796
chr16 87811524 87811529 MYC TRANSFAC yes 12237960
chr16 87811524 87811529 MYC TRANSFAC yes 49414797
chr16 87811549 87811568 RFX2 JASPAR yes 12237961
chr16 87811549 87811568 RFX2 JASPAR yes 49414798
chr16 87811553 87811569 RFX2 JASPAR yes 12237962
chr16 87811553 87811569 RFX3 JASPAR yes 12237963
chr16 87811553 87811569 RFX4 JASPAR yes 12237964
chr16 87811553 87811569 RFX5 JASPAR yes 12237965
chr16 87811553 87811569 RFX2 JASPAR yes 49414799
chr16 87811553 87811569 RFX3 JASPAR yes 49414800
chr16 87811553 87811569 RFX4 JASPAR yes 49414801
chr16 87811553 87811569 RFX5 JASPAR yes 49414802
chr16 87811554 87811573 RFX2 JASPAR yes 12237966
chr16 87811554 87811573 RFX2 JASPAR yes 49414803
chr16 87811582 87811597 LEF1 JASPAR yes 12237967
chr16 87811582 87811597 LEF1 JASPAR yes 49414804
chr16 87811591 87811602 ELF5 JASPAR yes 12237968
chr16 87811591 87811602 ELF5 JASPAR yes 49414805
chr16 87811600 87811614 PLAG1 JASPAR yes 12237969
chr16 87811600 87811614 PLAG1 JASPAR yes 49414806
chr16 87811603 87811614 EBF1 JASPAR yes 12237970
chr16 87811603 87811614 EBF1 JASPAR yes 49414807
chr16 87811629 87811634 GATA2 JASPAR yes 12237971
chr16 87811629 87811634 GATA2 JASPAR yes 49414808
chr16 87811631 87811645 RORA JASPAR yes 12237972
chr16 87811631 87811645 RORA JASPAR yes 49414809
chr16 87811634 87811644 RORA JASPAR yes 12237973
chr16 87811634 87811644 RORA JASPAR yes 49414810
chr16 87811639 87811643 ESR1 TRANSFAC yes 12237974
chr16 87811639 87811643 ESR1 TRANSFAC yes 49414811
chr16 87811641 87811650 THAP1 JASPAR yes 12237975
chr16 87811641 87811650 THAP1 JASPAR yes 49414812
chr16 87811644 87811648 LFA1 TRANSFAC yes 12237976
chr16 87811644 87811648 LFA1 TRANSFAC yes 49414813
chr16 87811654 87811673 CTCF JASPAR yes 12237977
chr16 87811654 87811673 CTCF JASPAR yes 49414814
chr16 87811655 87811670 ZIC4 JASPAR yes 12237978
chr16 87811655 87811670 ZIC4 JASPAR yes 49414815
chr16 87811702 87811712 HEY1 JASPAR yes 12237979
chr16 87811702 87811712 MAX JASPAR yes 12237980
chr16 87811702 87811712 MNT JASPAR yes 12237981
chr16 87811702 87811712 HEY1 JASPAR yes 49414816
chr16 87811702 87811712 MAX JASPAR yes 49414817
chr16 87811702 87811712 MNT JASPAR yes 49414818
chr16 87811703 87811710 USF1 JASPAR yes 12237982
chr16 87811703 87811710 USF1 JASPAR yes 49414819
chr16 87811703 87811713 MAX JASPAR yes 12237983
chr16 87811703 87811713 MAX JASPAR yes 49414820
chr16 87811704 87811709 MYC TRANSFAC yes 12237984
chr16 87811704 87811709 USF1 TRANSFAC yes 12237985
chr16 87811704 87811709 USF2 TRANSFAC yes 12237986
chr16 87811704 87811709 MYC TRANSFAC yes 49414821
chr16 87811704 87811709 USF1 TRANSFAC yes 49414822
chr16 87811704 87811709 USF2 TRANSFAC yes 49414823
chr16 87811725 87811729 YY1 TRANSFAC yes 12237987
chr16 87811725 87811729 YY1 TRANSFAC yes 49414824
chr16 87811728 87811731 MYB TRANSFAC yes 12237988
chr16 87811728 87811731 MYB TRANSFAC yes 49414825
chr16 87811733 87811749 POU4F2 JASPAR yes 12237989
chr16 87811733 87811749 POU4F3 JASPAR yes 12237990
chr16 87811733 87811749 POU4F2 JASPAR yes 49414826
chr16 87811733 87811749 POU4F3 JASPAR yes 49414827
chr16 87811735 87811739 YY1 TRANSFAC yes 12237991
chr16 87811735 87811739 YY1 TRANSFAC yes 49414828
chr16 87811737 87811749 MEF2A JASPAR yes 12237992
chr16 87811737 87811749 MEF2D JASPAR yes 12237993
chr16 87811737 87811749 MEF2A JASPAR yes 49414829
chr16 87811737 87811749 MEF2D JASPAR yes 49414830
chr16 87811738 87811748 MEF2A JASPAR yes 12237994
chr16 87811738 87811748 MEF2A JASPAR yes 49414831
chr16 87811740 87811752 MEF2A JASPAR yes 12237995
chr16 87811740 87811752 MEF2B JASPAR yes 12237996
chr16 87811740 87811752 MEF2D JASPAR yes 12237997
chr16 87811740 87811752 MEF2A JASPAR yes 49414832
chr16 87811740 87811752 MEF2B JASPAR yes 49414833
chr16 87811740 87811752 MEF2D JASPAR yes 49414834
chr16 87811742 87811753 CDX2 JASPAR yes 12237998
chr16 87811742 87811753 CDX2 JASPAR yes 49414835
chr16 87811743 87811754 HOXA10 JASPAR yes 12237999
chr16 87811743 87811754 HOXA10 JASPAR yes 49414836
chr16 87811744 87811753 CDX1 JASPAR yes 12238000
chr16 87811744 87811753 CDX1 JASPAR yes 49414837
chr16 87811759 87811780 IRF1 JASPAR yes 12238001
chr16 87811759 87811780 IRF1 JASPAR yes 49414838
chr16 87811763 87811778 PRDM1 JASPAR yes 12238002
chr16 87811763 87811778 PRDM1 JASPAR yes 49414839
chr16 87811783 87811803 TP63 JASPAR yes 12238003
chr16 87811783 87811803 TP63 JASPAR yes 49414840
chr16 87811784 87811802 TP53 JASPAR yes 12238004
chr16 87811784 87811802 TP63 JASPAR yes 12238005
chr16 87811784 87811802 TP73 JASPAR yes 12238006
chr16 87811784 87811802 TP53 JASPAR yes 49414841
chr16 87811784 87811802 TP63 JASPAR yes 49414842
chr16 87811784 87811802 TP73 JASPAR yes 49414843
chr16 87811785 87811800 TP53 JASPAR yes 12238007
chr16 87811785 87811800 TP53 JASPAR yes 49414844
chr16 87811786 87811801 TP53 JASPAR yes 12238008
chr16 87811786 87811801 TP53 JASPAR yes 49414845
chr16 87811788 87811798 SMAD3 JASPAR yes 12238009
chr16 87811788 87811798 SMAD3 JASPAR yes 49414846
chr16 87811803 87811807 YY1 TRANSFAC yes 12238010
chr16 87811803 87811807 YY1 TRANSFAC yes 49414847
chr16 87811840 87811846 NFE2 TRANSFAC yes 12238011
chr16 87811840 87811846 NFE2 TRANSFAC yes 49414848
chr16 87811841 87811853 INSM1 JASPAR yes 12238012
chr16 87811841 87811853 INSM1 JASPAR yes 49414849
chr16 87811860 87811864 H4TF2 TRANSFAC yes 12238013
chr16 87811860 87811864 H4TF2 TRANSFAC yes 49414850
chr16 87811862 87811868 MZF1 JASPAR yes 12238014
chr16 87811862 87811868 MZF1 JASPAR yes 49414851
chr16 87811866 87811870 YY1 TRANSFAC yes 12238015
chr16 87811866 87811870 YY1 TRANSFAC yes 49414852
chr16 87811871 87811878 JUN TRANSFAC yes 12238016
chr16 87811871 87811878 JUN TRANSFAC yes 49414853
SNP sites on vista23446[chr16:87811524-87811882]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87811561 rs142948362 T A
CTCF MAX MYC RAD21 RFX2 RFX3 RFX4 RFX5 SMC3 TCF7L2 USF1
4653865
chr16 87811564 rs187131565 G A
CTCF MAX MYC RAD21 RFX2 RFX3 RFX4 RFX5 SMC3 TCF7L2 USF1
4653866
chr16 87811604 rs546268399 G A
CTCF EBF1 MAX MYC PLAG1 RAD21 SMC3 TCF7L2 USF1
4653867
chr16 87811656 rs142075892 G A
CTCF MAX MYC RAD21 SMC3 TCF7L2 USF1 ZIC4
4653868
chr16 87811686 rs529473870 A G
CTCF MAX MYC RAD21 SMC3 TCF7L2 USF1
4653869
chr16 87811726 rs189970216 C A
CTCF MAX MYC RAD21 SMC3 TCF7L2 USF1 YY1
4653870
chr16 87811835 rs79406237 G A
CTCF MAX MYC SMC3 USF1
4653871
Genes possibly regulated by vista23446[chr16:87811524-87811882]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87727144 87729753 - AC010536.1 ENSG00000226180.2 87729753 0.72 1.0 15147 18229
chr16 87730091 87799598 - KLHDC4 ENSG00000104731.9 87799598 0.72 1.0 15148 88074
chr16 87731749 87739290 - FLJ00104 ENSG00000205047.3 87739290 0.7 1.0 15149 27766
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 8788
Expression level of Genes
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miRNAs possibly regulated by vista23446[chr16:87811524-87811882]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 87868198 87868218 - hsa-miR-6775-3p MIMAT0027451 87903110 5.4703398175094636e-05 0.0 0.0 638
Expression level of miRNAs
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