EnhancerDB
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  3. vista23448[chr16:87814047-87814397]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23448[chr16:87814047-87814397]
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Tissue distribution of vista23448
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Transcription factor that possibly regulate vista23448[chr16:87814047-87814397]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87814286 87814673 RUNX3 UCSC Txn Factor no Conserved 108220336
chr16 87814345 87814652 NFIC UCSC Txn Factor no Conserved 108220343
chr16 87814370 87814599 EGR1 UCSC Txn Factor no Conserved 108220348
chr16 87814048 87814052 ESR1 TRANSFAC yes 12238392
chr16 87814048 87814052 ESR1 TRANSFAC yes 49414916
chr16 87814057 87814075 ESR1 JASPAR yes 12238393
chr16 87814057 87814075 ESR1 JASPAR yes 49414917
chr16 87814101 87814107 ZNF354C JASPAR yes 12238394
chr16 87814101 87814107 ZNF354C JASPAR yes 49414918
chr16 87814107 87814122 NR2C2 JASPAR yes 12238395
chr16 87814107 87814122 NR2C2 JASPAR yes 49414919
chr16 87814115 87814129 PLAG1 JASPAR yes 12238396
chr16 87814115 87814129 PLAG1 JASPAR yes 49414920
chr16 87814116 87814129 NR2F1 JASPAR yes 12238397
chr16 87814116 87814129 NR2F1 JASPAR yes 49414921
chr16 87814120 87814124 ESR1 TRANSFAC yes 12238398
chr16 87814120 87814124 ESR1 TRANSFAC yes 49414922
chr16 87814149 87814154 TFAP2A TRANSFAC yes 12238399
chr16 87814149 87814154 TFAP2A TRANSFAC yes 49414923
chr16 87814149 87814155 MZF1 JASPAR yes 12238400
chr16 87814149 87814155 MZF1 JASPAR yes 49414924
chr16 87814155 87814159 YY1 TRANSFAC yes 12238401
chr16 87814155 87814159 YY1 TRANSFAC yes 49414925
chr16 87814159 87814173 ZIC1 JASPAR yes 12238402
chr16 87814159 87814173 ZIC1 JASPAR yes 49414926
chr16 87814166 87814177 NFE2L2 JASPAR yes 12238403
chr16 87814166 87814177 NFE2L2 JASPAR yes 49414927
chr16 87814168 87814186 ESR2 JASPAR yes 12238404
chr16 87814168 87814186 ESR2 JASPAR yes 49414928
chr16 87814169 87814187 ESR1 JASPAR yes 12238405
chr16 87814169 87814187 ESR1 JASPAR yes 49414929
chr16 87814174 87814193 CTCF JASPAR yes 12238406
chr16 87814174 87814193 CTCF JASPAR yes 49414930
chr16 87814178 87814188 FIGLA JASPAR yes 12238407
chr16 87814178 87814188 FIGLA JASPAR yes 49414931
chr16 87814180 87814185 USF2 TRANSFAC yes 12238408
chr16 87814180 87814185 USF2 TRANSFAC yes 49414932
chr16 87814235 87814250 FOXP1 JASPAR yes 12238409
chr16 87814235 87814250 FOXP1 JASPAR yes 49414933
chr16 87814238 87814249 FOXP2 JASPAR yes 12238410
chr16 87814238 87814249 FOXP2 JASPAR yes 49414934
chr16 87814239 87814247 FOXO3 JASPAR yes 12238411
chr16 87814239 87814247 FOXO3 JASPAR yes 49414935
chr16 87814240 87814249 SRY JASPAR yes 12238412
chr16 87814240 87814249 SRY JASPAR yes 49414936
chr16 87814263 87814284 IRF1 JASPAR yes 12238413
chr16 87814263 87814284 IRF1 JASPAR yes 49414937
chr16 87814271 87814282 FLI1 JASPAR yes 12238414
chr16 87814271 87814282 FLI1 JASPAR yes 49414938
chr16 87814272 87814285 ELF1 JASPAR yes 12238415
chr16 87814272 87814285 ELF1 JASPAR yes 49414939
chr16 87814283 87814296 SMAD2 JASPAR yes 12238416
chr16 87814283 87814296 SMAD2 JASPAR yes 49414940
chr16 87814297 87814306 NFIX JASPAR yes 12238417
chr16 87814297 87814306 NFIX JASPAR yes 49414941
chr16 87814297 87814307 NFIA JASPAR yes 12238418
chr16 87814297 87814307 NFIA JASPAR yes 49414942
chr16 87814299 87814305 NFIC JASPAR yes 12238419
chr16 87814299 87814305 NFIC JASPAR yes 49414943
chr16 87814355 87814359 ESR1 TRANSFAC yes 12238420
chr16 87814355 87814359 ESR1 TRANSFAC yes 49414944
chr16 87814358 87814372 TCF7L2 JASPAR yes 12238421
chr16 87814358 87814372 TCF7L2 JASPAR yes 49414945
chr16 87814362 87814368 TCF1 TRANSFAC yes 12238422
chr16 87814362 87814368 TCF1 TRANSFAC yes 49414946
chr16 87814368 87814383 NR2C2 JASPAR yes 12238423
chr16 87814368 87814383 NR2C2 JASPAR yes 49414947
chr16 87814378 87814382 LFA1 TRANSFAC yes 12238424
chr16 87814378 87814382 LFA1 TRANSFAC yes 49414948
chr16 87814394 87814405 ELK4 JASPAR yes 12238425
chr16 87814394 87814405 FLI1 JASPAR yes 12238426
chr16 87814394 87814405 ELK4 JASPAR yes 49414949
chr16 87814394 87814405 FLI1 JASPAR yes 49414950
chr16 87814394 87814411 BCL6B JASPAR yes 12238427
chr16 87814394 87814411 BCL6B JASPAR yes 49414951
SNP sites on vista23448[chr16:87814047-87814397]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87814055 rs7205588 C T no 4653903
chr16 87814145 rs139412358 G C no 4653904
chr16 87814148 rs60073370 G A,T no 4653905
chr16 87814166 rs150025455 C T
NFE2L2 ZIC1
4653906
chr16 87814178 rs555199934 C G,T
CTCF ESR1 ESR2 FIGLA
4653907
chr16 87814200 rs78038295 G A no 4653908
chr16 87814231 rs188779954 C A no 4653909
Genes possibly regulated by vista23448[chr16:87814047-87814397]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87727144 87729753 - AC010536.1 ENSG00000226180.2 87729753 0.72 1.0 15147 15706
chr16 87730091 87799598 - KLHDC4 ENSG00000104731.9 87799598 0.72 1.0 15148 85551
chr16 87731749 87739290 - FLJ00104 ENSG00000205047.3 87739290 0.7 1.0 15149 25243
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 11303
Expression level of Genes
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miRNAs possibly regulated by vista23448[chr16:87814047-87814397]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 87868198 87868218 - hsa-miR-6775-3p MIMAT0027451 87903110 5.625372680940112e-05 0.0 0.0 638
Expression level of miRNAs
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