EnhancerDB
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  3. vista23449[chr16:87823236-87823449]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23449[chr16:87823236-87823449]
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Tissue distribution of vista23449
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Transcription factor that possibly regulate vista23449[chr16:87823236-87823449]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87823075 87824095 EP300 UCSC Txn Factor no Conserved 108220402
chr16 87823075 87824095 EP300 UCSC Txn Factor no Conserved 108220403
chr16 87823114 87824022 TCF12 UCSC Txn Factor no Conserved 108220407
chr16 87823114 87824022 TCF12 UCSC Txn Factor no Conserved 108220408
chr16 87823183 87823479 HNF4A UCSC Txn Factor no Conserved 108220424
chr16 87823194 87823450 FOXA1 UCSC Txn Factor no Conserved 108220432
chr16 87823204 87823443 FOXA2 UCSC Txn Factor no Conserved 108220437
chr16 87823236 87823443 SP1 UCSC Txn Factor no Conserved 108220446
chr16 87823247 87823437 HNF4G UCSC Txn Factor no Conserved 108220453
chr16 87823433 87824089 E2F1 UCSC Txn Factor no Conserved 108220472
chr16 87823433 87824089 E2F1 UCSC Txn Factor no Conserved 108220473
chr16 87823231 87823242 EBF1 JASPAR yes 12239816
chr16 87823231 87823242 EBF1 JASPAR yes 49414952
chr16 87823257 87823263 ZNF354C JASPAR yes 12239817
chr16 87823257 87823263 ZNF354C JASPAR yes 49414953
chr16 87823273 87823285 TFAP2A JASPAR yes 12239818
chr16 87823273 87823285 TFAP2B JASPAR yes 12239819
chr16 87823273 87823285 TFAP2C JASPAR yes 12239820
chr16 87823273 87823285 TFAP2A JASPAR yes 49414954
chr16 87823273 87823285 TFAP2B JASPAR yes 49414955
chr16 87823273 87823285 TFAP2C JASPAR yes 49414956
chr16 87823274 87823283 TFAP2A JASPAR yes 12239821
chr16 87823274 87823283 TFAP2A JASPAR yes 49414957
chr16 87823299 87823311 IRF1 JASPAR yes 12239822
chr16 87823299 87823311 IRF1 JASPAR yes 49414958
chr16 87823311 87823326 FOXA1 JASPAR yes 12239823
chr16 87823311 87823326 FOXA1 JASPAR yes 49414959
chr16 87823312 87823324 FOXI1 JASPAR yes 12239824
chr16 87823312 87823324 FOXI1 JASPAR yes 49414960
chr16 87823315 87823326 FOXA1 JASPAR yes 12239825
chr16 87823315 87823326 FOXA1 JASPAR yes 49414961
chr16 87823324 87823335 CEBPA JASPAR yes 12239826
chr16 87823324 87823335 CEBPA JASPAR yes 49414962
chr16 87823329 87823335 HiNF-A TRANSFAC yes 12239827
chr16 87823329 87823335 HiNF-A TRANSFAC yes 49414963
chr16 87823340 87823352 HNF1B JASPAR yes 12239828
chr16 87823340 87823352 HNF1B JASPAR yes 49414964
chr16 87823341 87823356 HNF4A JASPAR yes 12239829
chr16 87823341 87823356 HNF4A JASPAR yes 49414965
chr16 87823342 87823357 HNF4G JASPAR yes 12239830
chr16 87823342 87823357 HNF4G JASPAR yes 49414966
chr16 87823354 87823362 ISL2 JASPAR yes 12239831
chr16 87823354 87823362 ISL2 JASPAR yes 49414967
chr16 87823377 87823382 ATF1 TRANSFAC yes 12239832
chr16 87823377 87823382 ATF1 TRANSFAC yes 49414968
chr16 87823385 87823397 PBX1 JASPAR yes 12239833
chr16 87823385 87823397 PBX1 JASPAR yes 49414969
chr16 87823395 87823405 TEAD1 JASPAR yes 12239834
chr16 87823395 87823405 TEAD1 JASPAR yes 49414970
chr16 87823404 87823418 POU1F1 JASPAR yes 12239835
chr16 87823404 87823418 POU1F1 JASPAR yes 49414971
chr16 87823405 87823417 POU3F1 JASPAR yes 12239836
chr16 87823405 87823417 POU3F2 JASPAR yes 12239837
chr16 87823405 87823417 POU3F1 JASPAR yes 49414972
chr16 87823405 87823417 POU3F2 JASPAR yes 49414973
chr16 87823407 87823412 MYB TRANSFAC yes 12239838
chr16 87823407 87823412 MYB TRANSFAC yes 49414974
chr16 87823414 87823424 RORA JASPAR yes 12239839
chr16 87823414 87823424 RORA JASPAR yes 49414975
chr16 87823429 87823433 YY1 TRANSFAC yes 12239840
chr16 87823429 87823433 YY1 TRANSFAC yes 49414976
chr16 87823432 87823438 NFIC JASPAR yes 12239841
chr16 87823432 87823438 NFIC JASPAR yes 49414977
chr16 87823435 87823450 PRDM1 JASPAR yes 12239842
chr16 87823435 87823450 STAT2 JASPAR yes 12239843
chr16 87823435 87823450 PRDM1 JASPAR yes 49414978
chr16 87823435 87823450 STAT2 JASPAR yes 49414979
chr16 87823436 87823450 STAT1 JASPAR yes 12239844
chr16 87823436 87823450 STAT1 JASPAR yes 49414980
SNP sites on vista23449[chr16:87823236-87823449]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87823331 rs76994190 G A
CEBPA EP300 FOXA1 FOXA2 HNF4A HNF4G HiNF-A SP1 TCF12
4654043
chr16 87823369 rs13339434 G A
EP300 FOXA1 FOXA2 HNF4A HNF4G SP1 TCF12
4654044
chr16 87823434 rs78705115 T C
E2F1 EP300 FOXA1 FOXA2 HNF4A HNF4G NFIC SP1 TCF12
4654045
Genes possibly regulated by vista23449[chr16:87823236-87823449]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87727144 87729753 - AC010536.1 ENSG00000226180.2 87729753 0.72 1.0 15147 6517
chr16 87730091 87799598 - KLHDC4 ENSG00000104731.9 87799598 0.72 1.0 15148 76362
chr16 87731749 87739290 - FLJ00104 ENSG00000205047.3 87739290 0.7 1.0 15149 16054
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 20355
Expression level of Genes
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miRNAs possibly regulated by vista23449[chr16:87823236-87823449]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 87868198 87868218 - hsa-miR-6775-3p MIMAT0027451 87903110 6.268570640522548e-05 0.0 0.0 638
Expression level of miRNAs
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