EnhancerDB
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  3. vista23454[chr16:87844019-87844295]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23454[chr16:87844019-87844295]
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Tissue distribution of vista23454
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Transcription factor that possibly regulate vista23454[chr16:87844019-87844295]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87842834 87844336 POLR2A UCSC Txn Factor no Conserved 108220766
chr16 87842834 87844336 POLR2A UCSC Txn Factor no Conserved 108220767
chr16 87843490 87844368 NFIC UCSC Txn Factor no Conserved 108220838
chr16 87843818 87844332 RUNX3 UCSC Txn Factor no Conserved 108220846
chr16 87843876 87844334 TCF12 UCSC Txn Factor no Conserved 108220854
chr16 87843993 87844334 SPI1 UCSC Txn Factor no Conserved 108220867
chr16 87844044 87844345 TCF3 UCSC Txn Factor no Conserved 108220880
chr16 87844067 87844427 CTCF UCSC Txn Factor no Conserved 108220886
chr16 87844017 87844032 TFAP2C JASPAR yes 12242453
chr16 87844017 87844032 TFAP2C JASPAR yes 49415195
chr16 87844018 87844022 NFE TRANSFAC yes 12242454
chr16 87844018 87844022 NFE TRANSFAC yes 49415196
chr16 87844021 87844027 MZF1 JASPAR yes 12242455
chr16 87844021 87844027 MZF1 JASPAR yes 49415197
chr16 87844025 87844043 ESR1 JASPAR yes 12242456
chr16 87844025 87844043 ESR1 JASPAR yes 49415198
chr16 87844028 87844039 EBF1 JASPAR yes 12242457
chr16 87844028 87844039 EBF1 JASPAR yes 49415199
chr16 87844075 87844090 RUNX2 JASPAR yes 12242458
chr16 87844075 87844090 RUNX2 JASPAR yes 49415200
chr16 87844076 87844087 RUNX1 JASPAR yes 12242459
chr16 87844076 87844087 RUNX1 JASPAR yes 49415201
chr16 87844098 87844104 MZF1 JASPAR yes 12242460
chr16 87844098 87844104 MZF1 JASPAR yes 49415202
chr16 87844101 87844105 H1TF2 TRANSFAC yes 12242461
chr16 87844101 87844105 NFE TRANSFAC yes 12242462
chr16 87844101 87844105 SRF TRANSFAC yes 12242463
chr16 87844101 87844105 H1TF2 TRANSFAC yes 49415203
chr16 87844101 87844105 NFE TRANSFAC yes 49415204
chr16 87844101 87844105 SRF TRANSFAC yes 49415205
chr16 87844116 87844122 LEF1 TRANSFAC yes 12242464
chr16 87844116 87844122 TCF4 TRANSFAC yes 12242465
chr16 87844116 87844122 LEF1 TRANSFAC yes 49415206
chr16 87844116 87844122 TCF4 TRANSFAC yes 49415207
chr16 87844130 87844136 NFIC JASPAR yes 12242466
chr16 87844130 87844136 NFIC JASPAR yes 49415208
chr16 87844133 87844147 SPI1 JASPAR yes 12242467
chr16 87844133 87844147 SPIC JASPAR yes 12242468
chr16 87844133 87844147 SPI1 JASPAR yes 49415209
chr16 87844133 87844147 SPIC JASPAR yes 49415210
chr16 87844137 87844142 TFAP2A TRANSFAC yes 12242469
chr16 87844137 87844142 TFAP2A TRANSFAC yes 49415211
chr16 87844137 87844143 MZF1 JASPAR yes 12242470
chr16 87844137 87844143 MZF1 JASPAR yes 49415212
chr16 87844139 87844144 ETS2 TRANSFAC yes 12242471
chr16 87844139 87844144 ETS2 TRANSFAC yes 49415213
chr16 87844145 87844163 MAFF JASPAR yes 12242472
chr16 87844145 87844163 MAFF JASPAR yes 49415214
chr16 87844147 87844158 NRL JASPAR yes 12242473
chr16 87844147 87844158 NRL JASPAR yes 49415215
chr16 87844147 87844162 MAFK JASPAR yes 12242474
chr16 87844147 87844162 MAFK JASPAR yes 49415216
chr16 87844150 87844163 JUN JASPAR yes 12242475
chr16 87844150 87844163 JUN JASPAR yes 49415217
chr16 87844157 87844167 EVX1 JASPAR yes 12242476
chr16 87844157 87844167 EVX2 JASPAR yes 12242477
chr16 87844157 87844167 HOXA2 JASPAR yes 12242478
chr16 87844157 87844167 MEOX1 JASPAR yes 12242479
chr16 87844157 87844167 EVX1 JASPAR yes 49415218
chr16 87844157 87844167 EVX2 JASPAR yes 49415219
chr16 87844157 87844167 HOXA2 JASPAR yes 49415220
chr16 87844157 87844167 MEOX1 JASPAR yes 49415221
chr16 87844158 87844168 POU6F2 JASPAR yes 12242480
chr16 87844158 87844168 POU6F2 JASPAR yes 49415222
chr16 87844161 87844182 REST JASPAR yes 12242481
chr16 87844161 87844182 REST JASPAR yes 49415223
chr16 87844164 87844174 ID4 JASPAR yes 12242482
chr16 87844164 87844174 TCF3 JASPAR yes 12242483
chr16 87844164 87844174 TCF4 JASPAR yes 12242484
chr16 87844164 87844174 ID4 JASPAR yes 49415224
chr16 87844164 87844174 TCF3 JASPAR yes 49415225
chr16 87844164 87844174 TCF4 JASPAR yes 49415226
chr16 87844166 87844171 USF2 TRANSFAC yes 12242485
chr16 87844166 87844171 USF2 TRANSFAC yes 49415227
chr16 87844171 87844181 SP1 JASPAR yes 12242486
chr16 87844171 87844181 SP1 JASPAR yes 49415228
chr16 87844182 87844201 REST JASPAR yes 12242487
chr16 87844182 87844201 REST JASPAR yes 49415229
chr16 87844182 87844203 ZNF263 JASPAR yes 12242488
chr16 87844182 87844203 ZNF263 JASPAR yes 49415230
chr16 87844195 87844215 RREB1 JASPAR yes 12242489
chr16 87844195 87844215 RREB1 JASPAR yes 49415231
chr16 87844199 87844209 TBX21 JASPAR yes 12242490
chr16 87844199 87844209 TBX21 JASPAR yes 49415232
chr16 87844199 87844210 TBX20 JASPAR yes 12242491
chr16 87844199 87844210 TBX20 JASPAR yes 49415233
chr16 87844200 87844208 MGA JASPAR yes 12242492
chr16 87844200 87844208 TBX15 JASPAR yes 12242493
chr16 87844200 87844208 TBX1 JASPAR yes 12242494
chr16 87844200 87844208 TBX4 JASPAR yes 12242495
chr16 87844200 87844208 TBX5 JASPAR yes 12242496
chr16 87844200 87844208 MGA JASPAR yes 49415234
chr16 87844200 87844208 TBX15 JASPAR yes 49415235
chr16 87844200 87844208 TBX1 JASPAR yes 49415236
chr16 87844200 87844208 TBX4 JASPAR yes 49415237
chr16 87844200 87844208 TBX5 JASPAR yes 49415238
chr16 87844209 87844222 NFKB1 JASPAR yes 12242497
chr16 87844209 87844222 NFKB1 JASPAR yes 49415239
chr16 87844210 87844221 NFKB1 JASPAR yes 12242498
chr16 87844210 87844221 NFKB1 JASPAR yes 49415240
chr16 87844211 87844222 NFKB1 JASPAR yes 12242499
chr16 87844211 87844222 NFKB1 JASPAR yes 49415241
chr16 87844213 87844218 SP1 TRANSFAC yes 12242500
chr16 87844213 87844218 SP1 TRANSFAC yes 49415242
chr16 87844214 87844228 NR2F1 JASPAR yes 12242501
chr16 87844214 87844228 NR2F1 JASPAR yes 49415243
chr16 87844237 87844247 FIGLA JASPAR yes 12242502
chr16 87844237 87844247 FIGLA JASPAR yes 49415244
chr16 87844276 87844287 FLI1 JASPAR yes 12242503
chr16 87844276 87844287 FLI1 JASPAR yes 49415245
chr16 87844290 87844294 H4TF2 TRANSFAC yes 12242504
chr16 87844290 87844294 H4TF2 TRANSFAC yes 49415246
SNP sites on vista23454[chr16:87844019-87844295]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87844069 rs72812270 G C
CTCF NFIC POLR2A RUNX3 SPI1 TCF12 TCF3
4654495
chr16 87844103 rs189057420 C T
CTCF H1TF2 MZF1 NFE NFIC POLR2A RUNX3 SPI1 SRF TCF12 TCF3
4654496
chr16 87844108 rs114993563 C A,G
CTCF NFIC POLR2A RUNX3 SPI1 TCF12 TCF3
4654497
chr16 87844110 rs4559918 C G
CTCF NFIC POLR2A RUNX3 SPI1 TCF12 TCF3
4654498
chr16 87844112 rs141001468 G C
CTCF NFIC POLR2A RUNX3 SPI1 TCF12 TCF3
4654499
chr16 87844263 rs115579011 G A
CTCF NFIC POLR2A RUNX3 SPI1 TCF12 TCF3
4654500
chr16 87844283 rs66951235 A G
CTCF FLI1 NFIC POLR2A RUNX3 SPI1 TCF12 TCF3
4654501
Genes possibly regulated by vista23454[chr16:87844019-87844295]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87730091 87799598 - KLHDC4 ENSG00000104731.9 87799598 0.72 1.0 15148 55579
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 41201
Expression level of Genes
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miRNAs possibly regulated by vista23454[chr16:87844019-87844295]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 87868198 87868218 - hsa-miR-6775-3p MIMAT0027451 87903110 8.482051978014521e-05 0.0 0.0 638
Expression level of miRNAs
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