EnhancerDB
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  3. vista23456[chr16:87870717-87871153]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23456[chr16:87870717-87871153]
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Tissue distribution of vista23456
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Transcription factor that possibly regulate vista23456[chr16:87870717-87871153]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87870699 87870719 ESR1 JASPAR yes 12245567
chr16 87870699 87870719 ESR1 JASPAR yes 49415280
chr16 87870711 87870719 EHF JASPAR yes 12245568
chr16 87870711 87870719 EHF JASPAR yes 49415281
chr16 87870728 87870731 MYB TRANSFAC yes 12245569
chr16 87870728 87870731 MYB TRANSFAC yes 49415282
chr16 87870735 87870740 ETS2 TRANSFAC yes 12245570
chr16 87870735 87870740 ETS2 TRANSFAC yes 49415283
chr16 87870737 87870758 ZNF263 JASPAR yes 12245571
chr16 87870737 87870758 ZNF263 JASPAR yes 49415284
chr16 87870760 87870774 NR2F1 JASPAR yes 12245572
chr16 87870760 87870774 NR2F1 JASPAR yes 49415285
chr16 87870777 87870789 NHLH1 JASPAR yes 12245573
chr16 87870777 87870789 PKNOX1 JASPAR yes 12245574
chr16 87870777 87870789 PKNOX2 JASPAR yes 12245575
chr16 87870777 87870789 NHLH1 JASPAR yes 49415286
chr16 87870777 87870789 PKNOX1 JASPAR yes 49415287
chr16 87870777 87870789 PKNOX2 JASPAR yes 49415288
chr16 87870777 87870790 ZBTB18 JASPAR yes 12245576
chr16 87870777 87870790 ZBTB18 JASPAR yes 49415289
chr16 87870778 87870788 NHLH1 JASPAR yes 12245577
chr16 87870778 87870788 NHLH1 JASPAR yes 49415290
chr16 87870781 87870794 SMAD2 JASPAR yes 12245578
chr16 87870781 87870794 SMAD2 JASPAR yes 49415291
chr16 87870794 87870805 FLI1 JASPAR yes 12245579
chr16 87870794 87870805 FLI1 JASPAR yes 49415292
chr16 87870798 87870805 SPIB JASPAR yes 12245580
chr16 87870798 87870805 SPIB JASPAR yes 49415293
chr16 87870808 87870813 GATA1 TRANSFAC yes 12245581
chr16 87870808 87870813 GATA1 TRANSFAC yes 49415294
chr16 87870826 87870831 ETS2 TRANSFAC yes 12245582
chr16 87870826 87870831 ETS2 TRANSFAC yes 49415295
chr16 87870832 87870851 CTCF JASPAR yes 12245583
chr16 87870832 87870851 CTCF JASPAR yes 49415296
chr16 87870841 87870852 NFKB1 JASPAR yes 12245584
chr16 87870841 87870852 NFKB1 JASPAR yes 49415297
chr16 87870863 87870868 SP1 TRANSFAC yes 12245585
chr16 87870863 87870868 SP1 TRANSFAC yes 49415298
chr16 87870866 87870871 SP1 TRANSFAC yes 12245586
chr16 87870866 87870871 SP1 TRANSFAC yes 49415299
chr16 87870882 87870897 TFAP2C JASPAR yes 12245587
chr16 87870882 87870897 TFAP2C JASPAR yes 49415300
chr16 87870883 87870894 EBF1 JASPAR yes 12245588
chr16 87870883 87870894 EBF1 JASPAR yes 49415301
chr16 87870888 87870894 PEA3 TRANSFAC yes 12245589
chr16 87870888 87870894 PEA3 TRANSFAC yes 49415302
chr16 87870921 87870934 EOMES JASPAR yes 12245590
chr16 87870921 87870934 EOMES JASPAR yes 49415303
chr16 87870923 87870927 ESR1 TRANSFAC yes 12245591
chr16 87870923 87870927 ESR1 TRANSFAC yes 49415304
chr16 87870924 87870934 TBX21 JASPAR yes 12245592
chr16 87870924 87870934 TBX21 JASPAR yes 49415305
chr16 87870925 87870933 MGA JASPAR yes 12245593
chr16 87870925 87870933 TBX15 JASPAR yes 12245594
chr16 87870925 87870933 TBX1 JASPAR yes 12245595
chr16 87870925 87870933 TBX4 JASPAR yes 12245596
chr16 87870925 87870933 TBX5 JASPAR yes 12245597
chr16 87870925 87870933 MGA JASPAR yes 49415306
chr16 87870925 87870933 TBX15 JASPAR yes 49415307
chr16 87870925 87870933 TBX1 JASPAR yes 49415308
chr16 87870925 87870933 TBX4 JASPAR yes 49415309
chr16 87870925 87870933 TBX5 JASPAR yes 49415310
chr16 87870925 87870941 GLIS1 JASPAR yes 12245598
chr16 87870925 87870941 GLIS1 JASPAR yes 49415311
chr16 87870944 87870959 TFAP2C JASPAR yes 12245599
chr16 87870944 87870959 TFAP2C JASPAR yes 49415312
chr16 87870947 87870958 TFAP2A JASPAR yes 12245600
chr16 87870947 87870958 TFAP2B JASPAR yes 12245601
chr16 87870947 87870958 TFAP2C JASPAR yes 12245602
chr16 87870947 87870958 TFAP2A JASPAR yes 49415313
chr16 87870947 87870958 TFAP2B JASPAR yes 49415314
chr16 87870947 87870958 TFAP2C JASPAR yes 49415315
chr16 87870982 87870988 ETS1 JASPAR yes 12245603
chr16 87870982 87870988 ETS1 JASPAR yes 49415316
chr16 87870986 87871001 JUND JASPAR yes 12245604
chr16 87870986 87871001 JUND JASPAR yes 49415317
chr16 87870998 87871007 NKX3-2 JASPAR yes 12245605
chr16 87870998 87871007 NKX3-2 JASPAR yes 49415318
chr16 87871002 87871017 PRDM1 JASPAR yes 12245606
chr16 87871002 87871017 PRDM1 JASPAR yes 49415319
chr16 87871008 87871013 ETS2 TRANSFAC yes 12245607
chr16 87871008 87871013 ETS2 TRANSFAC yes 49415320
chr16 87871018 87871034 SOX8 JASPAR yes 12245608
chr16 87871018 87871034 SOX8 JASPAR yes 49415321
chr16 87871023 87871039 SOX8 JASPAR yes 12245609
chr16 87871023 87871039 SOX8 JASPAR yes 49415322
chr16 87871025 87871029 YY1 TRANSFAC yes 12245610
chr16 87871025 87871029 YY1 TRANSFAC yes 49415323
chr16 87871036 87871049 EOMES JASPAR yes 12245611
chr16 87871036 87871049 EOMES JASPAR yes 49415324
chr16 87871037 87871047 TBR1 JASPAR yes 12245612
chr16 87871037 87871047 TBR1 JASPAR yes 49415325
chr16 87871041 87871052 NFE2L2 JASPAR yes 12245613
chr16 87871041 87871052 NFE2L2 JASPAR yes 49415326
chr16 87871054 87871068 TCF7L2 JASPAR yes 12245614
chr16 87871054 87871068 TCF7L2 JASPAR yes 49415327
chr16 87871059 87871065 SOX10 JASPAR yes 12245615
chr16 87871059 87871065 SOX10 JASPAR yes 49415328
chr16 87871084 87871090 ETS1 JASPAR yes 12245616
chr16 87871084 87871090 ETS1 JASPAR yes 49415329
chr16 87871090 87871111 ZNF263 JASPAR yes 12245617
chr16 87871090 87871111 ZNF263 JASPAR yes 49415330
chr16 87871097 87871111 SPI1 JASPAR yes 12245618
chr16 87871097 87871111 SPIC JASPAR yes 12245619
chr16 87871097 87871111 SPI1 JASPAR yes 49415331
chr16 87871097 87871111 SPIC JASPAR yes 49415332
chr16 87871100 87871111 ETV2 JASPAR yes 12245620
chr16 87871100 87871111 ETV2 JASPAR yes 49415333
chr16 87871103 87871109 ETS1 JASPAR yes 12245621
chr16 87871103 87871109 SPI1 JASPAR yes 12245622
chr16 87871103 87871109 ETS1 JASPAR yes 49415334
chr16 87871103 87871109 SPI1 JASPAR yes 49415335
chr16 87871106 87871111 ETS2 TRANSFAC yes 12245623
chr16 87871106 87871111 ETS2 TRANSFAC yes 49415336
chr16 87871123 87871137 ZIC1 JASPAR yes 12245624
chr16 87871123 87871137 ZIC1 JASPAR yes 49415337
chr16 87871123 87871138 ZIC3 JASPAR yes 12245625
chr16 87871123 87871138 ZIC4 JASPAR yes 12245626
chr16 87871123 87871138 ZIC3 JASPAR yes 49415338
chr16 87871123 87871138 ZIC4 JASPAR yes 49415339
chr16 87871144 87871156 GLI2 JASPAR yes 12245627
chr16 87871144 87871156 GLI2 JASPAR yes 49415340
chr16 87871151 87871163 ZBTB7A JASPAR yes 12245628
chr16 87871151 87871163 ZBTB7A JASPAR yes 49415341
SNP sites on vista23456[chr16:87870717-87871153]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87870723 rs59478863 G C no 4655103
chr16 87870810 rs73251328 T G
GATA1
4655104
chr16 87870866 rs4265809 T C
SP1
4655105
chr16 87870903 rs142192588 T TG no 4655106
chr16 87870927 rs560845047 C G
EOMES ESR1 GLIS1 MGA TBX1 TBX15 TBX21 TBX4 TBX5
4655107
chr16 87871013 rs74732351 T A
ETS2 PRDM1
4655108
chr16 87871096 rs12448415 A G
ZNF263
4655109
chr16 87871141 rs187796817 C T no 4655110
chr16 87871142 rs62058261 G C no 4655111
Genes possibly regulated by vista23456[chr16:87870717-87871153]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87730091 87799598 - KLHDC4 ENSG00000104731.9 87799598 0.72 1.0 15148 28881
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 68059
chr16 87921625 87970135 - CA5A ENSG00000174990.3 87970135 1.0 1.0 15151 1018
Expression level of Genes
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miRNAs possibly regulated by vista23456[chr16:87870717-87871153]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 87868198 87868218 - hsa-miR-6775-3p MIMAT0027451 87903110 0.00015542430836182778 0.0 0.0 638
Expression level of miRNAs
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