EnhancerDB
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  3. vista23457[chr16:87875229-87875683]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23457[chr16:87875229-87875683]
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Tissue distribution of vista23457
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Transcription factor that possibly regulate vista23457[chr16:87875229-87875683]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87875231 87875242 E2F6 JASPAR yes 12245760
chr16 87875231 87875242 E2F6 JASPAR yes 49415342
chr16 87875232 87875247 TFAP2C JASPAR yes 12245761
chr16 87875232 87875247 TFAP2C JASPAR yes 49415343
chr16 87875234 87875247 TFAP2A JASPAR yes 12245762
chr16 87875234 87875247 TFAP2B JASPAR yes 12245763
chr16 87875234 87875247 TFAP2C JASPAR yes 12245764
chr16 87875234 87875247 TFAP2A JASPAR yes 49415344
chr16 87875234 87875247 TFAP2B JASPAR yes 49415345
chr16 87875234 87875247 TFAP2C JASPAR yes 49415346
chr16 87875235 87875246 EBF1 JASPAR yes 12245765
chr16 87875235 87875246 EBF1 JASPAR yes 49415347
chr16 87875249 87875269 TP53 JASPAR yes 12245766
chr16 87875249 87875269 TP53 JASPAR yes 49415348
chr16 87875251 87875271 TP63 JASPAR yes 12245767
chr16 87875251 87875271 TP63 JASPAR yes 49415349
chr16 87875252 87875270 TP53 JASPAR yes 12245768
chr16 87875252 87875270 TP53 JASPAR yes 49415350
chr16 87875253 87875268 TP53 JASPAR yes 12245769
chr16 87875253 87875268 TP53 JASPAR yes 49415351
chr16 87875254 87875269 TP53 JASPAR yes 12245770
chr16 87875254 87875269 TP53 JASPAR yes 49415352
chr16 87875261 87875265 LFA1 TRANSFAC yes 12245771
chr16 87875261 87875265 LFA1 TRANSFAC yes 49415353
chr16 87875293 87875308 RUNX2 JASPAR yes 12245772
chr16 87875293 87875308 RUNX2 JASPAR yes 49415354
chr16 87875316 87875326 SP1 JASPAR yes 12245773
chr16 87875316 87875326 SP1 JASPAR yes 49415355
chr16 87875317 87875321 LFA1 TRANSFAC yes 12245774
chr16 87875317 87875321 LFA1 TRANSFAC yes 49415356
chr16 87875323 87875327 LFA1 TRANSFAC yes 12245775
chr16 87875323 87875327 LFA1 TRANSFAC yes 49415357
chr16 87875361 87875375 MTF1 JASPAR yes 12245776
chr16 87875361 87875375 MTF1 JASPAR yes 49415358
chr16 87875379 87875393 PLAG1 JASPAR yes 12245777
chr16 87875379 87875393 PLAG1 JASPAR yes 49415359
chr16 87875396 87875408 HES5 JASPAR yes 12245778
chr16 87875396 87875408 HES5 JASPAR yes 49415360
chr16 87875396 87875413 PAX1 JASPAR yes 12245779
chr16 87875396 87875413 PAX9 JASPAR yes 12245780
chr16 87875396 87875413 PAX1 JASPAR yes 49415361
chr16 87875396 87875413 PAX9 JASPAR yes 49415362
chr16 87875397 87875407 HEY1 JASPAR yes 12245781
chr16 87875397 87875407 HEY2 JASPAR yes 12245782
chr16 87875397 87875407 HEY1 JASPAR yes 49415363
chr16 87875397 87875407 HEY2 JASPAR yes 49415364
chr16 87875397 87875416 PAX5 JASPAR yes 12245783
chr16 87875397 87875416 PAX5 JASPAR yes 49415365
chr16 87875434 87875447 HSF2 JASPAR yes 12245784
chr16 87875434 87875447 HSF2 JASPAR yes 49415366
chr16 87875448 87875452 YY1 TRANSFAC yes 12245785
chr16 87875448 87875452 YY1 TRANSFAC yes 49415367
chr16 87875449 87875460 CEBPA JASPAR yes 12245786
chr16 87875449 87875460 CEBPA JASPAR yes 49415368
chr16 87875470 87875483 ZBTB18 JASPAR yes 12245787
chr16 87875470 87875483 ZBTB18 JASPAR yes 49415369
chr16 87875471 87875481 NHLH1 JASPAR yes 12245788
chr16 87875471 87875481 NHLH1 JASPAR yes 49415370
chr16 87875488 87875498 NFATC3 JASPAR yes 12245789
chr16 87875488 87875498 NFATC3 JASPAR yes 49415371
chr16 87875488 87875506 SRF JASPAR yes 12245790
chr16 87875488 87875506 SRF JASPAR yes 49415372
chr16 87875489 87875496 NFATC2 JASPAR yes 12245791
chr16 87875489 87875496 NFATC2 JASPAR yes 49415373
chr16 87875490 87875506 SRF JASPAR yes 12245792
chr16 87875490 87875506 SRF JASPAR yes 49415374
chr16 87875490 87875508 SRF JASPAR yes 12245793
chr16 87875490 87875508 SRF JASPAR yes 49415375
chr16 87875491 87875503 SRF JASPAR yes 12245794
chr16 87875491 87875503 SRF JASPAR yes 49415376
chr16 87875493 87875505 SRF JASPAR yes 12245795
chr16 87875493 87875505 SRF JASPAR yes 49415377
chr16 87875503 87875514 GCM1 JASPAR yes 12245796
chr16 87875503 87875514 GCM1 JASPAR yes 49415378
chr16 87875521 87875527 MZF1 JASPAR yes 12245797
chr16 87875521 87875527 MZF1 JASPAR yes 49415379
chr16 87875522 87875533 EBF1 JASPAR yes 12245798
chr16 87875522 87875533 EBF1 JASPAR yes 49415380
chr16 87875539 87875551 E2F8 JASPAR yes 12245799
chr16 87875539 87875551 E2F8 JASPAR yes 49415381
chr16 87875540 87875552 E2F8 JASPAR yes 12245800
chr16 87875540 87875552 E2F8 JASPAR yes 49415382
chr16 87875543 87875553 SP1 JASPAR yes 12245801
chr16 87875543 87875553 SP1 JASPAR yes 49415383
chr16 87875544 87875554 SP1 JASPAR yes 12245802
chr16 87875544 87875554 SP1 JASPAR yes 49415384
chr16 87875545 87875550 ETS2 TRANSFAC yes 12245803
chr16 87875545 87875550 ETS2 TRANSFAC yes 49415385
chr16 87875560 87875566 ETS1 JASPAR yes 12245804
chr16 87875560 87875566 SPI1 JASPAR yes 12245805
chr16 87875560 87875566 ETS1 JASPAR yes 49415386
chr16 87875560 87875566 SPI1 JASPAR yes 49415387
chr16 87875561 87875572 ESRRA JASPAR yes 12245806
chr16 87875561 87875572 ESRRB JASPAR yes 12245807
chr16 87875561 87875572 ESRRA JASPAR yes 49415388
chr16 87875561 87875572 ESRRB JASPAR yes 49415389
chr16 87875561 87875574 NR2F1 JASPAR yes 12245808
chr16 87875561 87875574 NR2F1 JASPAR yes 49415390
chr16 87875563 87875571 NR4A2 JASPAR yes 12245809
chr16 87875563 87875571 NR4A2 JASPAR yes 49415391
chr16 87875564 87875578 CREB3 JASPAR yes 12245810
chr16 87875564 87875578 CREB3L1 JASPAR yes 12245811
chr16 87875564 87875578 CREB3 JASPAR yes 49415392
chr16 87875564 87875578 CREB3L1 JASPAR yes 49415393
chr16 87875565 87875569 ESR1 TRANSFAC yes 12245812
chr16 87875565 87875569 ESR1 TRANSFAC yes 49415394
chr16 87875565 87875575 MAX JASPAR yes 12245813
chr16 87875565 87875575 MAX JASPAR yes 49415395
chr16 87875565 87875576 USF1 JASPAR yes 12245814
chr16 87875565 87875576 USF2 JASPAR yes 12245815
chr16 87875565 87875576 USF1 JASPAR yes 49415396
chr16 87875565 87875576 USF2 JASPAR yes 49415397
chr16 87875566 87875576 BHLHE40 JASPAR yes 12245816
chr16 87875566 87875576 BHLHE41 JASPAR yes 12245817
chr16 87875566 87875576 HEY1 JASPAR yes 12245818
chr16 87875566 87875576 HEY2 JASPAR yes 12245819
chr16 87875566 87875576 MAX JASPAR yes 12245820
chr16 87875566 87875576 MLXIPL JASPAR yes 12245821
chr16 87875566 87875576 MLX JASPAR yes 12245822
chr16 87875566 87875576 MNT JASPAR yes 12245823
chr16 87875566 87875576 SREBF2 JASPAR yes 12245824
chr16 87875566 87875576 TFE3 JASPAR yes 12245825
chr16 87875566 87875576 TFEB JASPAR yes 12245826
chr16 87875566 87875576 TFEC JASPAR yes 12245827
chr16 87875566 87875576 BHLHE40 JASPAR yes 49415398
chr16 87875566 87875576 BHLHE41 JASPAR yes 49415399
chr16 87875566 87875576 HEY1 JASPAR yes 49415400
chr16 87875566 87875576 HEY2 JASPAR yes 49415401
chr16 87875566 87875576 MAX JASPAR yes 49415402
chr16 87875566 87875576 MLXIPL JASPAR yes 49415403
chr16 87875566 87875576 MLX JASPAR yes 49415404
chr16 87875566 87875576 MNT JASPAR yes 49415405
chr16 87875566 87875576 SREBF2 JASPAR yes 49415406
chr16 87875566 87875576 TFE3 JASPAR yes 49415407
chr16 87875566 87875576 TFEB JASPAR yes 49415408
chr16 87875566 87875576 TFEC JASPAR yes 49415409
chr16 87875566 87875577 USF1 JASPAR yes 12245828
chr16 87875566 87875577 USF2 JASPAR yes 12245829
chr16 87875566 87875577 USF1 JASPAR yes 49415410
chr16 87875566 87875577 USF2 JASPAR yes 49415411
chr16 87875567 87875577 MAX JASPAR yes 12245830
chr16 87875567 87875577 MAX JASPAR yes 49415412
chr16 87875568 87875573 MYC TRANSFAC yes 12245831
chr16 87875568 87875573 USF1 TRANSFAC yes 12245832
chr16 87875568 87875573 USF2 TRANSFAC yes 12245833
chr16 87875568 87875573 MYC TRANSFAC yes 49415413
chr16 87875568 87875573 USF1 TRANSFAC yes 49415414
chr16 87875568 87875573 USF2 TRANSFAC yes 49415415
chr16 87875568 87875575 USF1 JASPAR yes 12245834
chr16 87875568 87875575 USF1 JASPAR yes 49415416
chr16 87875571 87875590 REST JASPAR yes 12245835
chr16 87875571 87875590 REST JASPAR yes 49415417
chr16 87875652 87875673 MAFG JASPAR yes 12245836
chr16 87875652 87875673 MAFG JASPAR yes 49415418
chr16 87875665 87875683 ESR1 JASPAR yes 12245837
chr16 87875665 87875683 ESR1 JASPAR yes 49415419
chr16 87875667 87875680 SMAD2 JASPAR yes 12245838
chr16 87875667 87875680 SMAD2 JASPAR yes 49415420
SNP sites on vista23457[chr16:87875229-87875683]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87875229 rs146031934 C T no 4655181
chr16 87875261 rs139548335 TG T
LFA1 TP53 TP63
4655182
chr16 87875261 rs771965801 TG T
LFA1 TP53 TP63
4655183
chr16 87875284 rs113049135 T C no 4655184
chr16 87875403 rs145239744 G A
HES5 HEY1 HEY2 PAX1 PAX5 PAX9
4655185
chr16 87875499 rs142362608 T C
SRF
4655186
chr16 87875523 rs535888952 C T
EBF1 MZF1
4655187
Genes possibly regulated by vista23457[chr16:87875229-87875683]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87730091 87799598 - KLHDC4 ENSG00000104731.9 87799598 0.72 1.0 15148 24369
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 72589
chr16 87921625 87970135 - CA5A ENSG00000174990.3 87970135 1.0 1.0 15151 5548
Expression level of Genes
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miRNAs possibly regulated by vista23457[chr16:87875229-87875683]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 87868198 87868218 - hsa-miR-6775-3p MIMAT0027451 87903110 0.00018083836666787226 0.0 0.0 638
Expression level of miRNAs
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