EnhancerDB
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  3. vista23470[chr16:87978906-87979489]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23470[chr16:87978906-87979489]
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Tissue distribution of vista23470
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Transcription factor that possibly regulate vista23470[chr16:87978906-87979489]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87978793 87979421 POLR2A UCSC Txn Factor no Conserved 108221691
chr16 87979058 87979338 MAFK UCSC Txn Factor no Conserved 108221699
chr16 87979058 87979351 USF1 UCSC Txn Factor no Conserved 108221701
chr16 87979397 87979635 SP1 UCSC Txn Factor no Conserved 108221715
chr16 87978907 87978925 ESR1 JASPAR yes 49416084
chr16 87978932 87978942 HOXA13 JASPAR yes 49416085
chr16 87978932 87978942 HOXB13 JASPAR yes 49416086
chr16 87978932 87978942 HOXD13 JASPAR yes 49416087
chr16 87978932 87978943 HOXA10 JASPAR yes 49416088
chr16 87978933 87978942 CDX1 JASPAR yes 49416089
chr16 87978933 87978944 CDX2 JASPAR yes 49416090
chr16 87978936 87978956 PPARG JASPAR yes 49416091
chr16 87978940 87978944 H4TF2 TRANSFAC yes 49416092
chr16 87978944 87978948 YY1 TRANSFAC yes 49416093
chr16 87978945 87978953 FEV JASPAR yes 49416094
chr16 87978946 87978953 E2F1 TRANSFAC yes 49416095
chr16 87978946 87978954 E2F1 JASPAR yes 49416096
chr16 87978974 87978992 ESR1 JASPAR yes 49416097
chr16 87978982 87978991 ZEB1 JASPAR yes 49416098
chr16 87978982 87978997 SCRT1 JASPAR yes 49416099
chr16 87978983 87978993 FIGLA JASPAR yes 49416100
chr16 87978983 87978993 ID4 JASPAR yes 49416101
chr16 87978983 87978993 MSC JASPAR yes 49416102
chr16 87978983 87978993 TCF3 JASPAR yes 49416103
chr16 87978983 87978993 TCF4 JASPAR yes 49416104
chr16 87978984 87978993 SNAI2 JASPAR yes 49416105
chr16 87978984 87978997 SCRT2 JASPAR yes 49416106
chr16 87978985 87978990 USF2 TRANSFAC yes 49416107
chr16 87978986 87978992 PTF TRANSFAC yes 49416108
chr16 87978995 87979004 ZEB1 JASPAR yes 49416109
chr16 87978996 87979006 TCF3 JASPAR yes 49416110
chr16 87978996 87979006 TCF4 JASPAR yes 49416111
chr16 87978997 87979006 SNAI2 JASPAR yes 49416112
chr16 87978998 87979003 USF2 TRANSFAC yes 49416113
chr16 87979019 87979029 POU6F2 JASPAR yes 49416114
chr16 87979020 87979030 GSX1 JASPAR yes 49416115
chr16 87979021 87979029 NKX6-1 JASPAR yes 49416116
chr16 87979021 87979029 NKX6-2 JASPAR yes 49416117
chr16 87979023 87979027 YY1 TRANSFAC yes 49416118
chr16 87979048 87979062 ZIC1 JASPAR yes 49416119
chr16 87979048 87979063 ZIC4 JASPAR yes 49416120
chr16 87979059 87979072 POU3F3 JASPAR yes 49416121
chr16 87979059 87979073 POU1F1 JASPAR yes 49416122
chr16 87979060 87979072 POU3F1 JASPAR yes 49416123
chr16 87979060 87979072 POU3F2 JASPAR yes 49416124
chr16 87979061 87979070 POU5F1B JASPAR yes 49416125
chr16 87979064 87979074 EVX1 JASPAR yes 49416126
chr16 87979064 87979074 EVX2 JASPAR yes 49416127
chr16 87979064 87979074 LHX6 JASPAR yes 49416128
chr16 87979068 87979078 MSC JASPAR yes 49416129
chr16 87979068 87979078 TFAP4 JASPAR yes 49416130
chr16 87979073 87979077 NFE TRANSFAC yes 49416131
chr16 87979075 87979094 PAX5 JASPAR yes 49416132
chr16 87979092 87979100 RHOXF1 JASPAR yes 49416133
chr16 87979092 87979101 PITX3 JASPAR yes 49416134
chr16 87979096 87979104 BARX1 JASPAR yes 49416135
chr16 87979096 87979104 BSX JASPAR yes 49416136
chr16 87979096 87979104 ISL2 JASPAR yes 49416137
chr16 87979096 87979104 LMX1B JASPAR yes 49416138
chr16 87979096 87979104 MSX1 JASPAR yes 49416139
chr16 87979096 87979104 MSX2 JASPAR yes 49416140
chr16 87979103 87979108 MYC TRANSFAC yes 49416141
chr16 87979116 87979127 EBF1 JASPAR yes 49416142
chr16 87979170 87979183 SMAD2 JASPAR yes 49416143
chr16 87979188 87979193 ATF1 TRANSFAC yes 49416144
chr16 87979191 87979202 NRL JASPAR yes 49416145
chr16 87979195 87979209 ATF7 JASPAR yes 49416146
chr16 87979195 87979209 BATF3 JASPAR yes 49416147
chr16 87979196 87979208 JDP2 JASPAR yes 49416148
chr16 87979198 87979203 ATF1 TRANSFAC yes 49416149
chr16 87979198 87979206 CREB1 JASPAR yes 49416150
chr16 87979200 87979205 ATF1 TRANSFAC yes 49416151
chr16 87979209 87979219 BHLHE40 JASPAR yes 49416152
chr16 87979210 87979220 MAX JASPAR yes 49416153
chr16 87979211 87979216 MYC TRANSFAC yes 49416154
chr16 87979211 87979216 USF1 TRANSFAC yes 49416155
chr16 87979211 87979216 USF2 TRANSFAC yes 49416156
chr16 87979228 87979240 TFAP2A JASPAR yes 49416157
chr16 87979228 87979240 TFAP2B JASPAR yes 49416158
chr16 87979228 87979240 TFAP2C JASPAR yes 49416159
chr16 87979228 87979243 TFAP2A JASPAR yes 49416160
chr16 87979228 87979243 TFAP2C JASPAR yes 49416161
chr16 87979229 87979243 PLAG1 JASPAR yes 49416162
chr16 87979246 87979251 TFAP2A TRANSFAC yes 49416163
chr16 87979246 87979252 MZF1 JASPAR yes 49416164
chr16 87979285 87979304 RFX2 JASPAR yes 49416165
chr16 87979292 87979304 NHLH1 JASPAR yes 49416166
chr16 87979293 87979303 NHLH1 JASPAR yes 49416167
chr16 87979323 87979343 RREB1 JASPAR yes 49416168
chr16 87979324 87979334 ZNF740 JASPAR yes 49416169
chr16 87979325 87979346 ZNF263 JASPAR yes 49416170
chr16 87979327 87979333 MZF1 JASPAR yes 49416171
chr16 87979334 87979339 SP1 TRANSFAC yes 49416172
chr16 87979346 87979366 ESR1 JASPAR yes 49416173
chr16 87979349 87979367 ESR2 JASPAR yes 49416174
chr16 87979350 87979367 ESR1 JASPAR yes 49416175
chr16 87979350 87979368 ESR1 JASPAR yes 49416176
chr16 87979350 87979368 ESR2 JASPAR yes 49416177
chr16 87979351 87979366 ESR2 JASPAR yes 49416178
chr16 87979351 87979371 ESR1 JASPAR yes 49416179
chr16 87979360 87979375 NR2C2 JASPAR yes 49416180
chr16 87979363 87979369 SP1 TRANSFAC yes 49416181
chr16 87979363 87979373 SP1 JASPAR yes 49416182
chr16 87979365 87979385 TP53 JASPAR yes 49416183
chr16 87979366 87979378 INSM1 JASPAR yes 49416184
chr16 87979373 87979385 PKNOX2 JASPAR yes 49416185
chr16 87979373 87979385 TGIF1 JASPAR yes 49416186
chr16 87979373 87979385 TGIF2 JASPAR yes 49416187
chr16 87979406 87979410 ESR1 TRANSFAC yes 49416188
chr16 87979443 87979452 TFAP2A JASPAR yes 49416189
SNP sites on vista23470[chr16:87978906-87979489]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87978920 rs140204385 A C
ESR1 POLR2A
4656934
chr16 87978963 rs74732810 T G
POLR2A
4656935
chr16 87979033 rs576576029 G C
POLR2A
4656936
chr16 87979162 rs11646115 G A
MAFK POLR2A USF1
4656937
chr16 87979182 rs377563998 G A,C
MAFK POLR2A SMAD2 USF1
4656938
chr16 87979253 rs147720711 C G
MAFK POLR2A USF1
4656939
chr16 87979260 rs11642653 T C
MAFK POLR2A USF1
4656940
chr16 87979456 rs140776631 C T
SP1
4656941
Genes possibly regulated by vista23470[chr16:87978906-87979489]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 24188
chr16 87921625 87970135 - CA5A ENSG00000174990.3 87970135 1.0 1.0 15151 91229
chr16 87982850 88110924 + BANP ENSG00000172530.15 87982850 0.68 1.0 15152 96639
Expression level of Genes
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miRNAs possibly regulated by vista23470[chr16:87978906-87979489]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results