EnhancerDB
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  3. vista23471[chr16:87980577-87980839]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23471[chr16:87980577-87980839]
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Tissue distribution of vista23471
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Transcription factor that possibly regulate vista23471[chr16:87980577-87980839]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87980582 87980603 ZNF263 JASPAR yes 49416190
chr16 87980587 87980597 SP1 JASPAR yes 49416191
chr16 87980587 87980608 ZNF263 JASPAR yes 49416192
chr16 87980589 87980595 MAZ TRANSFAC yes 49416193
chr16 87980590 87980611 ZNF263 JASPAR yes 49416194
chr16 87980605 87980626 ZNF263 JASPAR yes 49416195
chr16 87980622 87980633 NFKB1 JASPAR yes 49416196
chr16 87980626 87980640 ZIC1 JASPAR yes 49416197
chr16 87980626 87980641 ZIC3 JASPAR yes 49416198
chr16 87980626 87980641 ZIC4 JASPAR yes 49416199
chr16 87980627 87980638 EBF1 JASPAR yes 49416200
chr16 87980627 87980640 TFAP2C JASPAR yes 49416201
chr16 87980628 87980641 TFAP2A JASPAR yes 49416202
chr16 87980628 87980641 TFAP2B JASPAR yes 49416203
chr16 87980628 87980641 TFAP2C JASPAR yes 49416204
chr16 87980629 87980640 EBF1 JASPAR yes 49416205
chr16 87980629 87980641 TFAP2A JASPAR yes 49416206
chr16 87980639 87980648 SOX9 JASPAR yes 49416207
chr16 87980640 87980655 SOX21 JASPAR yes 49416208
chr16 87980646 87980652 TCF4 TRANSFAC yes 49416209
chr16 87980654 87980665 FOXP2 JASPAR yes 49416210
chr16 87980656 87980664 FOXO3 JASPAR yes 49416211
chr16 87980677 87980693 GLIS1 JASPAR yes 49416212
chr16 87980684 87980689 SP1 TRANSFAC yes 49416213
chr16 87980684 87980703 RFX2 JASPAR yes 49416214
chr16 87980688 87980704 RFX2 JASPAR yes 49416215
chr16 87980688 87980704 RFX3 JASPAR yes 49416216
chr16 87980688 87980704 RFX4 JASPAR yes 49416217
chr16 87980696 87980701 ATF1 TRANSFAC yes 49416218
chr16 87980729 87980735 ZNF354C JASPAR yes 49416219
chr16 87980745 87980755 FIGLA JASPAR yes 49416220
chr16 87980745 87980755 ID4 JASPAR yes 49416221
chr16 87980745 87980755 TCF3 JASPAR yes 49416222
chr16 87980745 87980755 TCF4 JASPAR yes 49416223
chr16 87980747 87980752 USF2 TRANSFAC yes 49416224
chr16 87980775 87980781 MZF1 JASPAR yes 49416225
chr16 87980794 87980798 LFA1 TRANSFAC yes 49416226
chr16 87980804 87980815 FOXH1 JASPAR yes 49416227
chr16 87980805 87980811 ZNF354C JASPAR yes 49416228
chr16 87980808 87980813 H4TF1 TRANSFAC yes 49416229
chr16 87980830 87980834 H1TF2 TRANSFAC yes 49416230
chr16 87980830 87980834 NFE TRANSFAC yes 49416231
chr16 87980830 87980834 SRF TRANSFAC yes 49416232
SNP sites on vista23471[chr16:87980577-87980839]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87980608 rs28479149 A G
ZNF263
4656951
chr16 87980639 rs75701541 G A
EBF1 SOX9 TFAP2A TFAP2B TFAP2C ZIC1 ZIC3 ZIC4
4656952
chr16 87980689 rs7500885 G A
GLIS1 RFX2 RFX3 RFX4 SP1
4656953
chr16 87980704 rs77309783 C T
RFX2 RFX3 RFX4
4656954
chr16 87980730 rs9930389 A G
ZNF354C
4656955
chr16 87980745 rs114874711 C T
FIGLA ID4 TCF3 TCF4
4656956
chr16 87980759 rs6540118 T C no 4656957
Genes possibly regulated by vista23471[chr16:87980577-87980839]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 22517
chr16 87921625 87970135 - CA5A ENSG00000174990.3 87970135 1.0 1.0 15151 89558
chr16 87982850 88110924 + BANP ENSG00000172530.15 87982850 0.68 1.0 15152 97989
Expression level of Genes
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miRNAs possibly regulated by vista23471[chr16:87980577-87980839]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results