EnhancerDB
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  3. vista23473[chr16:87986927-87987379]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23473[chr16:87986927-87987379]
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Tissue distribution of vista23473
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Transcription factor that possibly regulate vista23473[chr16:87986927-87987379]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87983289 87987818 POLR2A UCSC Txn Factor no Conserved 108221740
chr16 87983289 87987818 POLR2A UCSC Txn Factor no Conserved 108221741
chr16 87986941 87986955 RORA JASPAR yes 12254234
chr16 87986941 87986955 RORA JASPAR yes 49416296
chr16 87986949 87986953 ESR1 TRANSFAC yes 12254235
chr16 87986949 87986953 ESR1 TRANSFAC yes 49416297
chr16 87986967 87986973 JUN TRANSFAC yes 12254236
chr16 87986967 87986973 JUN TRANSFAC yes 49416298
chr16 87986977 87986998 IRF1 JASPAR yes 12254237
chr16 87986977 87986998 IRF1 JASPAR yes 49416299
chr16 87986986 87986990 YY1 TRANSFAC yes 12254238
chr16 87986986 87986990 YY1 TRANSFAC yes 49416300
chr16 87986997 87987011 GATA2 JASPAR yes 12254239
chr16 87986997 87987011 GATA2 JASPAR yes 49416301
chr16 87986999 87987005 GATA3 JASPAR yes 12254240
chr16 87986999 87987005 GATA3 JASPAR yes 49416302
chr16 87987030 87987048 RARA JASPAR yes 12254241
chr16 87987030 87987048 RARA JASPAR yes 49416303
chr16 87987041 87987048 JUN TRANSFAC yes 12254242
chr16 87987041 87987048 JUN TRANSFAC yes 49416304
chr16 87987078 87987091 ZBTB18 JASPAR yes 12254243
chr16 87987078 87987091 ZBTB18 JASPAR yes 49416305
chr16 87987080 87987089 SNAI2 JASPAR yes 12254244
chr16 87987080 87987089 SNAI2 JASPAR yes 49416306
chr16 87987080 87987090 FIGLA JASPAR yes 12254245
chr16 87987080 87987090 ID4 JASPAR yes 12254246
chr16 87987080 87987090 TCF3 JASPAR yes 12254247
chr16 87987080 87987090 TCF4 JASPAR yes 12254248
chr16 87987080 87987090 FIGLA JASPAR yes 49416307
chr16 87987080 87987090 ID4 JASPAR yes 49416308
chr16 87987080 87987090 TCF3 JASPAR yes 49416309
chr16 87987080 87987090 TCF4 JASPAR yes 49416310
chr16 87987082 87987091 ZEB1 JASPAR yes 12254249
chr16 87987082 87987091 ZEB1 JASPAR yes 49416311
chr16 87987082 87987092 TBX21 JASPAR yes 12254250
chr16 87987082 87987092 TBX21 JASPAR yes 49416312
chr16 87987082 87987093 TBX2 JASPAR yes 12254251
chr16 87987082 87987093 TBX2 JASPAR yes 49416313
chr16 87987083 87987091 MGA JASPAR yes 12254252
chr16 87987083 87987091 TBX15 JASPAR yes 12254253
chr16 87987083 87987091 TBX1 JASPAR yes 12254254
chr16 87987083 87987091 TBX4 JASPAR yes 12254255
chr16 87987083 87987091 TBX5 JASPAR yes 12254256
chr16 87987083 87987091 MGA JASPAR yes 49416314
chr16 87987083 87987091 TBX15 JASPAR yes 49416315
chr16 87987083 87987091 TBX1 JASPAR yes 49416316
chr16 87987083 87987091 TBX4 JASPAR yes 49416317
chr16 87987083 87987091 TBX5 JASPAR yes 49416318
chr16 87987083 87987093 TBR1 JASPAR yes 12254257
chr16 87987083 87987093 TBR1 JASPAR yes 49416319
chr16 87987116 87987120 YY1 TRANSFAC yes 12254258
chr16 87987116 87987120 YY1 TRANSFAC yes 49416320
chr16 87987124 87987135 NFE2L2 JASPAR yes 12254259
chr16 87987124 87987135 NFE2L2 JASPAR yes 49416321
chr16 87987151 87987161 SREBF1 JASPAR yes 12254260
chr16 87987151 87987161 SREBF2 JASPAR yes 12254261
chr16 87987151 87987161 SREBF1 JASPAR yes 49416322
chr16 87987151 87987161 SREBF2 JASPAR yes 49416323
chr16 87987151 87987171 PPARG JASPAR yes 12254262
chr16 87987151 87987171 PPARG JASPAR yes 49416324
chr16 87987170 87987174 NFE TRANSFAC yes 12254263
chr16 87987170 87987174 NFE TRANSFAC yes 49416325
chr16 87987176 87987181 GATA2 JASPAR yes 12254264
chr16 87987176 87987181 GATA2 JASPAR yes 49416326
chr16 87987189 87987193 NFE TRANSFAC yes 12254265
chr16 87987189 87987193 NFE TRANSFAC yes 49416327
chr16 87987190 87987195 GATA2 JASPAR yes 12254266
chr16 87987190 87987195 GATA2 JASPAR yes 49416328
chr16 87987201 87987205 NFE TRANSFAC yes 12254267
chr16 87987201 87987205 NFE TRANSFAC yes 49416329
chr16 87987215 87987227 POU2F1 JASPAR yes 12254268
chr16 87987215 87987227 POU2F1 JASPAR yes 49416330
chr16 87987216 87987227 FOXA1 JASPAR yes 12254269
chr16 87987216 87987227 FOXA1 JASPAR yes 49416331
chr16 87987216 87987228 POU3F1 JASPAR yes 12254270
chr16 87987216 87987228 POU3F2 JASPAR yes 12254271
chr16 87987216 87987228 POU3F1 JASPAR yes 49416332
chr16 87987216 87987228 POU3F2 JASPAR yes 49416333
chr16 87987216 87987229 POU2F2 JASPAR yes 12254272
chr16 87987216 87987229 POU2F2 JASPAR yes 49416334
chr16 87987216 87987231 FOXA1 JASPAR yes 12254273
chr16 87987216 87987231 FOXA1 JASPAR yes 49416335
chr16 87987217 87987225 POU2F1 TRANSFAC yes 12254274
chr16 87987217 87987225 POU2F1 TRANSFAC yes 49416336
chr16 87987217 87987226 POU3F4 JASPAR yes 12254275
chr16 87987217 87987226 POU5F1B JASPAR yes 12254276
chr16 87987217 87987226 POU3F4 JASPAR yes 49416337
chr16 87987217 87987226 POU5F1B JASPAR yes 49416338
chr16 87987218 87987225 POU2F1 TRANSFAC yes 12254277
chr16 87987218 87987225 POU2F2 TRANSFAC yes 12254278
chr16 87987218 87987225 POU2F1 TRANSFAC yes 49416339
chr16 87987218 87987225 POU2F2 TRANSFAC yes 49416340
chr16 87987235 87987249 PAX6 JASPAR yes 12254279
chr16 87987235 87987249 PAX6 JASPAR yes 49416341
chr16 87987241 87987256 SOX21 JASPAR yes 12254280
chr16 87987241 87987256 SOX21 JASPAR yes 49416342
chr16 87987250 87987265 STAT2 JASPAR yes 12254281
chr16 87987250 87987265 STAT2 JASPAR yes 49416343
chr16 87987251 87987265 STAT1 JASPAR yes 12254282
chr16 87987251 87987265 STAT1 JASPAR yes 49416344
chr16 87987256 87987267 FLI1 JASPAR yes 12254283
chr16 87987256 87987267 FLI1 JASPAR yes 49416345
chr16 87987257 87987267 GABPA JASPAR yes 12254284
chr16 87987257 87987267 GABPA JASPAR yes 49416346
chr16 87987258 87987266 EHF JASPAR yes 12254285
chr16 87987258 87987266 EHF JASPAR yes 49416347
chr16 87987272 87987278 ZNF354C JASPAR yes 12254286
chr16 87987272 87987278 ZNF354C JASPAR yes 49416348
chr16 87987283 87987294 FOS JASPAR yes 12254287
chr16 87987283 87987294 FOS JASPAR yes 49416349
chr16 87987301 87987311 NFIA JASPAR yes 12254288
chr16 87987301 87987311 NFIA JASPAR yes 49416350
chr16 87987302 87987311 NFIX JASPAR yes 12254289
chr16 87987302 87987311 NFIX JASPAR yes 49416351
chr16 87987303 87987309 NFIC JASPAR yes 12254290
chr16 87987303 87987309 NFIC JASPAR yes 49416352
chr16 87987304 87987321 NR3C1 JASPAR yes 12254291
chr16 87987304 87987321 NR3C2 JASPAR yes 12254292
chr16 87987304 87987321 NR3C1 JASPAR yes 49416353
chr16 87987304 87987321 NR3C2 JASPAR yes 49416354
chr16 87987304 87987325 IRF1 JASPAR yes 12254293
chr16 87987304 87987325 IRF1 JASPAR yes 49416355
chr16 87987306 87987321 AR JASPAR yes 12254294
chr16 87987306 87987321 STAT2 JASPAR yes 12254295
chr16 87987306 87987321 AR JASPAR yes 49416356
chr16 87987306 87987321 STAT2 JASPAR yes 49416357
chr16 87987307 87987321 STAT1 JASPAR yes 12254296
chr16 87987307 87987321 STAT1 JASPAR yes 49416358
chr16 87987308 87987323 IRF9 JASPAR yes 12254297
chr16 87987308 87987323 IRF9 JASPAR yes 49416359
chr16 87987334 87987343 SRY JASPAR yes 12254298
chr16 87987334 87987343 SRY JASPAR yes 49416360
chr16 87987352 87987357 GATA2 JASPAR yes 12254299
chr16 87987352 87987357 GATA2 JASPAR yes 49416361
chr16 87987363 87987367 H4TF2 TRANSFAC yes 12254300
chr16 87987363 87987367 H4TF2 TRANSFAC yes 49416362
chr16 87987365 87987386 ZNF263 JASPAR yes 12254301
chr16 87987365 87987386 ZNF263 JASPAR yes 49416363
chr16 87987366 87987381 PRDM1 JASPAR yes 12254302
chr16 87987366 87987381 PRDM1 JASPAR yes 49416364
chr16 87987366 87987387 ZNF263 JASPAR yes 12254303
chr16 87987366 87987387 ZNF263 JASPAR yes 49416365
SNP sites on vista23473[chr16:87986927-87987379]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87986931 rs190573856 A G
POLR2A
4657071
chr16 87986981 rs62053960 C G
IRF1 POLR2A
4657072
chr16 87987007 rs370639186 A T
GATA2 POLR2A
4657073
chr16 87987028 rs60650979 C G,T
POLR2A
4657074
chr16 87987061 rs113806243 G A,T
POLR2A
4657075
chr16 87987184 rs114251137 A C
POLR2A
4657076
chr16 87987194 rs73240736 C T
GATA2 POLR2A
4657077
chr16 87987203 rs117881184 T G
NFE POLR2A
4657078
chr16 87987219 rs59927177 A G
FOXA1 POLR2A POU2F1 POU2F2 POU3F1 POU3F2 POU3F4 POU5F1B
4657079
chr16 87987367 rs60122275 C A
H4TF2 POLR2A PRDM1 ZNF263
4657080
Genes possibly regulated by vista23473[chr16:87986927-87987379]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 16167
chr16 87921625 87970135 - CA5A ENSG00000174990.3 87970135 1.0 1.0 15151 83208
chr16 87982850 88110924 + BANP ENSG00000172530.15 87982850 0.68 1.0 15152 95923
Expression level of Genes
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miRNAs possibly regulated by vista23473[chr16:87986927-87987379]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results