EnhancerDB
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  3. vista23474[chr16:87987504-87988357]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23474[chr16:87987504-87988357]
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Tissue distribution of vista23474
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Transcription factor that possibly regulate vista23474[chr16:87987504-87988357]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87983289 87987818 POLR2A UCSC Txn Factor no Conserved 108221740
chr16 87983289 87987818 POLR2A UCSC Txn Factor no Conserved 108221741
chr16 87987490 87987506 RFX2 JASPAR yes 12254317
chr16 87987490 87987506 RFX3 JASPAR yes 12254318
chr16 87987490 87987506 RFX4 JASPAR yes 12254319
chr16 87987490 87987506 RFX5 JASPAR yes 12254320
chr16 87987490 87987506 RFX2 JASPAR yes 49416366
chr16 87987490 87987506 RFX3 JASPAR yes 49416367
chr16 87987490 87987506 RFX4 JASPAR yes 49416368
chr16 87987490 87987506 RFX5 JASPAR yes 49416369
chr16 87987501 87987514 ZBTB18 JASPAR yes 12254321
chr16 87987501 87987514 ZBTB18 JASPAR yes 49416370
chr16 87987517 87987530 ELF1 JASPAR yes 12254322
chr16 87987517 87987530 ELF1 JASPAR yes 49416371
chr16 87987517 87987536 CTCF JASPAR yes 12254323
chr16 87987517 87987536 CTCF JASPAR yes 49416372
chr16 87987536 87987546 SP1 JASPAR yes 12254324
chr16 87987536 87987546 SP1 JASPAR yes 49416373
chr16 87987539 87987550 E2F6 JASPAR yes 12254325
chr16 87987539 87987550 E2F6 JASPAR yes 49416374
chr16 87987566 87987581 LEF1 JASPAR yes 12254326
chr16 87987566 87987581 LEF1 JASPAR yes 49416375
chr16 87987578 87987588 POU6F2 JASPAR yes 12254327
chr16 87987578 87987588 POU6F2 JASPAR yes 49416376
chr16 87987595 87987615 RREB1 JASPAR yes 12254328
chr16 87987595 87987615 RREB1 JASPAR yes 49416377
chr16 87987607 87987615 TBX5 JASPAR yes 12254329
chr16 87987607 87987615 TBX5 JASPAR yes 49416378
chr16 87987612 87987623 FOXH1 JASPAR yes 12254330
chr16 87987612 87987623 FOXH1 JASPAR yes 49416379
chr16 87987613 87987619 ZNF354C JASPAR yes 12254331
chr16 87987613 87987619 ZNF354C JASPAR yes 49416380
chr16 87987629 87987643 NR2F1 JASPAR yes 12254332
chr16 87987629 87987643 NR2F1 JASPAR yes 49416381
chr16 87987631 87987652 REST JASPAR yes 12254333
chr16 87987631 87987652 REST JASPAR yes 49416382
chr16 87987635 87987642 JUN TRANSFAC yes 12254334
chr16 87987635 87987642 JUN TRANSFAC yes 49416383
chr16 87987647 87987653 SOX10 JASPAR yes 12254335
chr16 87987647 87987653 SOX10 JASPAR yes 49416384
chr16 87987648 87987659 ESRRB JASPAR yes 12254336
chr16 87987648 87987659 ESRRB JASPAR yes 49416385
chr16 87987659 87987674 HSF1 JASPAR yes 12254337
chr16 87987659 87987674 HSF1 JASPAR yes 49416386
chr16 87987663 87987676 NFKB2 JASPAR yes 12254338
chr16 87987663 87987676 NFKB2 JASPAR yes 49416387
chr16 87987664 87987669 ETS2 TRANSFAC yes 12254339
chr16 87987664 87987669 ETS2 TRANSFAC yes 49416388
chr16 87987664 87987674 NFKB1 JASPAR yes 12254340
chr16 87987664 87987674 REL JASPAR yes 12254341
chr16 87987664 87987674 NFKB1 JASPAR yes 49416389
chr16 87987664 87987674 REL JASPAR yes 49416390
chr16 87987664 87987675 NFKB1 JASPAR yes 12254342
chr16 87987664 87987675 NFKB1 JASPAR yes 49416391
chr16 87987665 87987675 NFKB1 JASPAR yes 12254343
chr16 87987665 87987675 REL JASPAR yes 12254344
chr16 87987665 87987675 NFKB1 JASPAR yes 49416392
chr16 87987665 87987675 REL JASPAR yes 49416393
chr16 87987680 87987684 NFE TRANSFAC yes 12254345
chr16 87987680 87987684 NFE TRANSFAC yes 49416394
chr16 87987694 87987715 ZNF263 JASPAR yes 12254346
chr16 87987694 87987715 ZNF263 JASPAR yes 49416395
chr16 87987695 87987702 SPIB JASPAR yes 12254347
chr16 87987695 87987702 SPIB JASPAR yes 49416396
chr16 87987716 87987720 NFE TRANSFAC yes 12254348
chr16 87987716 87987720 NFE TRANSFAC yes 49416397
chr16 87987725 87987739 SPI1 JASPAR yes 12254349
chr16 87987725 87987739 SPI1 JASPAR yes 49416398
chr16 87987776 87987781 GATA2 JASPAR yes 12254350
chr16 87987776 87987781 GATA2 JASPAR yes 49416399
chr16 87987779 87987787 EHF JASPAR yes 12254351
chr16 87987779 87987787 EHF JASPAR yes 49416400
chr16 87987781 87987786 ETS2 TRANSFAC yes 12254352
chr16 87987781 87987786 ETS2 TRANSFAC yes 49416401
chr16 87987834 87987849 SOX21 JASPAR yes 12254353
chr16 87987834 87987849 SOX21 JASPAR yes 49416402
chr16 87987839 87987853 POU4F1 JASPAR yes 12254354
chr16 87987839 87987853 POU4F1 JASPAR yes 49416403
chr16 87987839 87987855 POU4F3 JASPAR yes 12254355
chr16 87987839 87987855 POU4F3 JASPAR yes 49416404
chr16 87987844 87987854 HOXA13 JASPAR yes 12254356
chr16 87987844 87987854 HOXA13 JASPAR yes 49416405
chr16 87987847 87987865 TP53 JASPAR yes 12254357
chr16 87987847 87987865 TP73 JASPAR yes 12254358
chr16 87987847 87987865 TP53 JASPAR yes 49416406
chr16 87987847 87987865 TP73 JASPAR yes 49416407
chr16 87987848 87987868 TP53 JASPAR yes 12254359
chr16 87987848 87987868 TP53 JASPAR yes 49416408
chr16 87987863 87987867 YY1 TRANSFAC yes 12254360
chr16 87987863 87987867 YY1 TRANSFAC yes 49416409
chr16 87987868 87987889 IRF1 JASPAR yes 12254361
chr16 87987868 87987889 IRF1 JASPAR yes 49416410
chr16 87987870 87987885 STAT2 JASPAR yes 12254362
chr16 87987870 87987885 STAT2 JASPAR yes 49416411
chr16 87987871 87987885 STAT1 JASPAR yes 12254363
chr16 87987871 87987885 STAT1 JASPAR yes 49416412
chr16 87987872 87987886 IRF7 JASPAR yes 12254364
chr16 87987872 87987886 IRF8 JASPAR yes 12254365
chr16 87987872 87987886 IRF7 JASPAR yes 49416413
chr16 87987872 87987886 IRF8 JASPAR yes 49416414
chr16 87987872 87987887 IRF9 JASPAR yes 12254366
chr16 87987872 87987887 IRF9 JASPAR yes 49416415
chr16 87987875 87987888 POU2F2 JASPAR yes 12254367
chr16 87987875 87987888 POU2F2 JASPAR yes 49416416
chr16 87987896 87987908 HLF JASPAR yes 12254368
chr16 87987896 87987908 HLF JASPAR yes 49416417
chr16 87987927 87987932 ETS2 TRANSFAC yes 12254369
chr16 87987927 87987932 ETS2 TRANSFAC yes 49416418
chr16 87987938 87987950 PROX1 JASPAR yes 12254370
chr16 87987938 87987950 PROX1 JASPAR yes 49416419
chr16 87987950 87987971 REST JASPAR yes 12254371
chr16 87987950 87987971 REST JASPAR yes 49416420
chr16 87987951 87987970 REST JASPAR yes 12254372
chr16 87987951 87987970 REST JASPAR yes 49416421
chr16 87987956 87987970 TCF7L2 JASPAR yes 49416422
chr16 87987959 87987965 LEF1 TRANSFAC yes 49416423
chr16 87987959 87987965 SOX10 JASPAR yes 49416424
chr16 87987968 87987973 H4TF1 TRANSFAC yes 49416425
chr16 87987975 87987983 FOXO3 JASPAR yes 49416426
chr16 87987975 87987985 NFATC3 JASPAR yes 49416427
chr16 87987981 87987989 HOXA5 JASPAR yes 49416428
chr16 87987994 87988000 TBP TRANSFAC yes 49416429
chr16 87988010 87988023 ELF1 JASPAR yes 49416430
chr16 87988010 87988024 SPI1 JASPAR yes 49416431
chr16 87988010 87988024 SPIC JASPAR yes 49416432
chr16 87988013 87988020 SPIB JASPAR yes 49416433
chr16 87988013 87988031 SRF JASPAR yes 49416434
chr16 87988018 87988027 CDX1 JASPAR yes 49416435
chr16 87988018 87988029 CDX2 JASPAR yes 49416436
chr16 87988035 87988048 ZBTB18 JASPAR yes 49416437
chr16 87988039 87988054 FOXA1 JASPAR yes 49416438
chr16 87988041 87988055 FOXF2 JASPAR yes 49416439
chr16 87988042 87988050 FOXD1 JASPAR yes 49416440
chr16 87988042 87988050 FOXG1 JASPAR yes 49416441
chr16 87988042 87988050 FOXO3 JASPAR yes 49416442
chr16 87988042 87988053 FOXC1 JASPAR yes 49416443
chr16 87988043 87988050 FOXD2 JASPAR yes 49416444
chr16 87988043 87988050 FOXI1 JASPAR yes 49416445
chr16 87988043 87988050 FOXL1 JASPAR yes 49416446
chr16 87988043 87988050 FOXO4 JASPAR yes 49416447
chr16 87988043 87988050 FOXO6 JASPAR yes 49416448
chr16 87988043 87988050 FOXP3 JASPAR yes 49416449
chr16 87988043 87988054 FOXA1 JASPAR yes 49416450
chr16 87988058 87988079 ZNF263 JASPAR yes 49416451
chr16 87988064 87988070 PEA3 TRANSFAC yes 49416452
chr16 87988064 87988075 FLI1 JASPAR yes 49416453
chr16 87988076 87988087 NFKB1 JASPAR yes 49416454
chr16 87988077 87988087 NFKB1 JASPAR yes 49416455
chr16 87988086 87988101 RUNX2 JASPAR yes 49416456
chr16 87988087 87988101 PLAG1 JASPAR yes 49416457
chr16 87988118 87988128 MZF1 JASPAR yes 49416458
chr16 87988124 87988134 SREBF1 JASPAR yes 49416459
chr16 87988124 87988134 SREBF2 JASPAR yes 49416460
chr16 87988131 87988136 NFY TRANSFAC yes 49416461
chr16 87988138 87988157 RFX2 JASPAR yes 49416462
chr16 87988140 87988148 MEIS3 JASPAR yes 49416463
chr16 87988140 87988155 RFX5 JASPAR yes 49416464
chr16 87988141 87988145 NFE TRANSFAC yes 49416465
chr16 87988145 87988150 MYC TRANSFAC yes 49416466
chr16 87988176 87988180 YY1 TRANSFAC yes 49416467
chr16 87988189 87988203 SPI1 JASPAR yes 49416468
chr16 87988203 87988211 EHF JASPAR yes 49416469
chr16 87988205 87988215 REL JASPAR yes 49416470
chr16 87988214 87988220 TCF4 TRANSFAC yes 49416471
chr16 87988225 87988235 ZNF740 JASPAR yes 49416472
chr16 87988256 87988266 NFIA JASPAR yes 49416473
chr16 87988258 87988264 NFIC JASPAR yes 49416474
chr16 87988259 87988271 HES7 JASPAR yes 49416475
chr16 87988260 87988269 SNAI2 JASPAR yes 49416476
chr16 87988260 87988270 ID4 JASPAR yes 49416477
chr16 87988260 87988270 NHLH1 JASPAR yes 49416478
chr16 87988260 87988270 TCF3 JASPAR yes 49416479
chr16 87988260 87988270 TCF4 JASPAR yes 49416480
chr16 87988262 87988271 ZEB1 JASPAR yes 49416481
chr16 87988264 87988274 GCM2 JASPAR yes 49416482
chr16 87988277 87988292 TFAP2C JASPAR yes 49416483
chr16 87988278 87988287 THAP1 JASPAR yes 49416484
chr16 87988278 87988289 GCM1 JASPAR yes 49416485
chr16 87988279 87988292 TFAP2A JASPAR yes 49416486
chr16 87988279 87988292 TFAP2B JASPAR yes 49416487
chr16 87988279 87988292 TFAP2C JASPAR yes 49416488
chr16 87988311 87988322 NRF1 JASPAR yes 49416489
chr16 87988324 87988337 NFKB1 JASPAR yes 49416490
chr16 87988324 87988337 NFKB2 JASPAR yes 49416491
chr16 87988325 87988335 REL JASPAR yes 49416492
chr16 87988331 87988346 NR2C2 JASPAR yes 49416493
chr16 87988337 87988346 THAP1 JASPAR yes 49416494
chr16 87988349 87988353 H4TF2 TRANSFAC yes 49416495
SNP sites on vista23474[chr16:87987504-87988357]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87987693 rs112933771 T C
POLR2A
4657083
chr16 87987695 rs150337352 C G
POLR2A SPIB ZNF263
4657084
chr16 87987715 rs374417886 T C
POLR2A ZNF263
4657085
chr16 87987771 rs368425016 C G,T
POLR2A
4657086
chr16 87987797 rs186089425 G A,C
POLR2A
4657087
chr16 87987896 rs534009140 T C
HLF
4657088
chr16 87987961 rs72628302 T G
LEF1 REST SOX10 TCF7L2
4657089
chr16 87988127 rs572598970 C T
MZF1 SREBF1 SREBF2
4657090
chr16 87988183 rs72631403 C G no 4657091
chr16 87988196 rs73240741 C G,T
SPI1
4657092
chr16 87988255 rs72631404 C T no 4657093
chr16 87988256 rs572988490 G T
NFIA
4657094
chr16 87988313 rs143806353 C T
NRF1
4657095
chr16 87988356 rs148366948 C G no 4657096
Genes possibly regulated by vista23474[chr16:87987504-87988357]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 15590
chr16 87921625 87970135 - CA5A ENSG00000174990.3 87970135 1.0 1.0 15151 82631
chr16 87982850 88110924 + BANP ENSG00000172530.15 87982850 0.68 1.0 15152 95346
Expression level of Genes
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miRNAs possibly regulated by vista23474[chr16:87987504-87988357]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results