EnhancerDB
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  3. vista23475[chr16:87988913-87989737]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23475[chr16:87988913-87989737]
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Tissue distribution of vista23475
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Transcription factor that possibly regulate vista23475[chr16:87988913-87989737]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 87989172 87990461 POLR2A UCSC Txn Factor no Conserved 108221755
chr16 87988960 87988978 MAFF JASPAR yes 49416496
chr16 87988961 87988976 MAFK JASPAR yes 49416497
chr16 87988964 87988968 ESR1 TRANSFAC yes 49416498
chr16 87988967 87988982 STAT2 JASPAR yes 49416499
chr16 87988969 87988981 IRF1 JASPAR yes 49416500
chr16 87988982 87988988 GATA3 JASPAR yes 49416501
chr16 87989006 87989019 POU2F2 JASPAR yes 49416502
chr16 87989018 87989022 YY1 TRANSFAC yes 49416503
chr16 87989059 87989071 CREB1 JASPAR yes 49416504
chr16 87989061 87989075 BATF3 JASPAR yes 49416505
chr16 87989062 87989074 PROX1 JASPAR yes 49416506
chr16 87989064 87989069 ATF1 TRANSFAC yes 49416507
chr16 87989064 87989072 CREB1 JASPAR yes 49416508
chr16 87989068 87989079 NFIL3 JASPAR yes 49416509
chr16 87989069 87989081 DBP JASPAR yes 49416510
chr16 87989069 87989081 HLF JASPAR yes 49416511
chr16 87989069 87989081 TEF JASPAR yes 49416512
chr16 87989071 87989082 NFIL3 JASPAR yes 49416513
chr16 87989076 87989079 MYB TRANSFAC yes 49416514
chr16 87989090 87989094 TEAD2 TRANSFAC yes 49416515
chr16 87989090 87989095 TBP TRANSFAC yes 49416516
chr16 87989096 87989109 HSF4 JASPAR yes 49416517
chr16 87989113 87989117 YY1 TRANSFAC yes 49416518
chr16 87989113 87989127 PAX6 JASPAR yes 49416519
chr16 87989117 87989127 CEBPB JASPAR yes 49416520
chr16 87989117 87989127 CEBPD JASPAR yes 49416521
chr16 87989117 87989127 CEBPE JASPAR yes 49416522
chr16 87989117 87989127 CEBPG JASPAR yes 49416523
chr16 87989184 87989190 SP1 TRANSFAC yes 49416524
chr16 87989184 87989198 PLAG1 JASPAR yes 49416525
chr16 87989215 87989220 SP1 TRANSFAC yes 49416526
chr16 87989220 87989224 NFE TRANSFAC yes 49416527
chr16 87989239 87989243 NFE TRANSFAC yes 49416528
chr16 87989245 87989260 FOXA1 JASPAR yes 49416529
chr16 87989247 87989259 FOXC2 JASPAR yes 49416530
chr16 87989247 87989260 POU2F2 JASPAR yes 49416531
chr16 87989248 87989259 FOXB1 JASPAR yes 49416532
chr16 87989248 87989259 FOXC1 JASPAR yes 49416533
chr16 87989248 87989260 POU3F1 JASPAR yes 49416534
chr16 87989248 87989261 POU3F3 JASPAR yes 49416535
chr16 87989249 87989253 YY1 TRANSFAC yes 49416536
chr16 87989249 87989260 FOXA1 JASPAR yes 49416537
chr16 87989249 87989261 POU2F1 JASPAR yes 49416538
chr16 87989250 87989259 POU3F4 JASPAR yes 49416539
chr16 87989250 87989259 POU5F1B JASPAR yes 49416540
chr16 87989251 87989259 FOXL1 JASPAR yes 49416541
chr16 87989262 87989268 SOX10 JASPAR yes 49416542
chr16 87989267 87989272 GATA1 TRANSFAC yes 49416543
chr16 87989279 87989293 XBP1 JASPAR yes 49416544
chr16 87989280 87989294 CREB3 JASPAR yes 49416545
chr16 87989285 87989290 ATF1 TRANSFAC yes 49416546
chr16 87989290 87989296 SOX10 JASPAR yes 49416547
chr16 87989293 87989314 IRF1 JASPAR yes 49416548
chr16 87989297 87989311 STAT1 JASPAR yes 49416549
chr16 87989297 87989312 STAT2 JASPAR yes 49416550
chr16 87989297 87989315 IRF2 JASPAR yes 49416551
chr16 87989298 87989310 IRF1 JASPAR yes 49416552
chr16 87989320 87989330 NFATC3 JASPAR yes 49416553
chr16 87989322 87989329 NFATC2 JASPAR yes 49416554
chr16 87989322 87989333 NFKB1 JASPAR yes 49416555
chr16 87989323 87989333 REL JASPAR yes 49416556
chr16 87989323 87989334 NFKB1 JASPAR yes 49416557
chr16 87989364 87989367 MYB TRANSFAC yes 49416558
chr16 87989435 87989441 HiNF-A TRANSFAC yes 49416559
chr16 87989436 87989457 MAFG JASPAR yes 49416560
chr16 87989440 87989451 NFE2L2 JASPAR yes 49416561
chr16 87989480 87989501 REST JASPAR yes 49416562
chr16 87989484 87989499 RUNX2 JASPAR yes 49416563
chr16 87989509 87989518 NKX2-8 JASPAR yes 49416564
chr16 87989521 87989535 TCF7L2 JASPAR yes 49416565
chr16 87989547 87989555 FEV JASPAR yes 49416566
chr16 87989556 87989570 TLX1 JASPAR yes 49416567
chr16 87989557 87989566 SNAI2 JASPAR yes 49416568
chr16 87989557 87989568 USF2 JASPAR yes 49416569
chr16 87989588 87989592 H4TF2 TRANSFAC yes 49416570
chr16 87989596 87989602 ETS1 JASPAR yes 49416571
chr16 87989596 87989602 SPI1 JASPAR yes 49416572
chr16 87989618 87989639 ZNF263 JASPAR yes 49416573
chr16 87989627 87989648 ZNF263 JASPAR yes 49416574
chr16 87989628 87989648 RREB1 JASPAR yes 49416575
chr16 87989638 87989650 INSM1 JASPAR yes 49416576
chr16 87989644 87989663 REST JASPAR yes 49416577
chr16 87989655 87989664 SNAI2 JASPAR yes 49416578
chr16 87989655 87989665 ID4 JASPAR yes 49416579
chr16 87989655 87989665 TCF3 JASPAR yes 49416580
chr16 87989655 87989665 TCF4 JASPAR yes 49416581
chr16 87989665 87989669 LFA1 TRANSFAC yes 49416582
SNP sites on vista23475[chr16:87988913-87989737]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 87988913 rs567579168 C T no 4657113
chr16 87989082 rs8058503 A G
NFIL3
4657114
chr16 87989142 rs115635694 C T no 4657115
chr16 87989146 rs4843746 C G no 4657116
chr16 87989149 rs145462295 C T no 4657117
chr16 87989166 rs148480624 C T no 4657118
chr16 87989179 rs370565369 C G
POLR2A
4657119
chr16 87989191 rs142735766 C T
PLAG1 POLR2A
4657120
chr16 87989201 rs150980024 C T
POLR2A
4657121
chr16 87989209 rs115223847 C T
POLR2A
4657122
chr16 87989252 rs142198609 T C
FOXA1 FOXB1 FOXC1 FOXC2 FOXL1 POLR2A POU2F1 POU2F2 POU3F1 POU3F3 POU3F4 POU5F1B YY1
4657123
chr16 87989320 rs113778667 C T
NFATC3 POLR2A
4657124
chr16 87989395 rs182577195 A G
POLR2A
4657125
chr16 87989579 rs11640359 T C
POLR2A
4657126
chr16 87989656 rs57315861 C T
ID4 POLR2A REST SNAI2 TCF3 TCF4
4657127
chr16 87989688 rs374171704 T C
POLR2A
4657128
chr16 87989735 rs11643960 G A
POLR2A
4657129
Genes possibly regulated by vista23475[chr16:87988913-87989737]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87863629 87903094 - SLC7A5 ENSG00000103257.4 87903094 0.95 1.0 15150 14181
chr16 87921625 87970135 - CA5A ENSG00000174990.3 87970135 1.0 1.0 15151 81222
chr16 87982850 88110924 + BANP ENSG00000172530.15 87982850 0.68 1.0 15152 93937
Expression level of Genes
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miRNAs possibly regulated by vista23475[chr16:87988913-87989737]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results